Phodopus roborovskii (desert hamster): 127226144
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Entry
127226144 CDS
T08852
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127226144 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127226144 (Rnf43)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127226144 (Rnf43)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127226144 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
127226144
NCBI-ProteinID:
XP_051046024
UniProt:
A0AAU9YKP3
LinkDB
All DBs
Position
Unknown
AA seq
663 aa
AA seq
DB search
MAGERGASAILFDITEDRSAAEQLQQPLGLTWPVVLIWGNDAEKLMEFVYKNRKAHVRIE
LKEPPAWPDYDVWILLTVVGTIFVIILASVLRIKCRPHHSRPDPLQQRTAWAISQLGTRR
YQASCRRTRAEWPDSGSSCSSAPMCAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHR
TCPLCMFNIIEGDSFSQALGASPSYQEPGRRLHLIRQHPGHAHYHLPSAYLLGSSRNSVA
RPPRPRPFLPSQEPRMGSRHQRLPRASHLRAPEEQQHLAVSQHPYAPRGWGLSHVRCTSQ
HPTGCPVAPRRARPHDSSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVVNCTDIS
LQGIHGSSSTFRSSLSSDFDPLVYCSPEGDLQGKGVQPSVTSRPRSLDSVVPTGETRVSS
HIHYHRHRHHHHHHHKKRFQWHGRKPGPETGVPQSRPRASQTLLQREPSLSEQKLTTPNP
AASSVLPNTQRPRSLTEPAPDLVEAASPSPSPSSNPNSLLNLQKSSLPVRHPQRKRRGGP
SEPLPTSRPQALTVHPACQVFPHYSPSLAYPWPPEAHPLIFRPPGLDRRLLHEAPGPCYS
SSQPVWLYLPPRRPLGPCSPGEGHSEWSSDTPEGRPCPYPHCQVLPGQPGSEEELEELCE
QAV
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgagcgaggagccagtgccatactctttgacatcaccgaggaccgatcagct
gctgagcagctgcagcagcccctggggctgacttggccagtggtgctgatctggggtaat
gatgctgagaagctgatggagtttgtgtacaagaatcggaaggcccatgtgaggattgag
ctgaaggagcccccggcctggccagactatgacgtgtggatcctcctgactgtggtgggc
accatctttgtcatcatcctggcttcagtgctgcgcataaagtgtcgcccccatcacagc
agaccggaccctctgcagcaacggacagcctgggccatcagccagctgggtacccggagg
taccaagccagctgtaggcggactcgagctgaatggccagactcagggagtagctgtagc
tcggcccccatgtgtgccatctgcctggaggaattctcagaggggcaggagcttcgggtc
atttcctgcctccacgagttccatcgtacctgtgtggacccctggctataccagcatcgg
acttgccctctctgcatgttcaacatcatagagggagattcattttctcaggccctggga
gcctctccatcttatcaggaaccaggcaggagactccacctcattcgccagcatcctggc
cacgcccactatcatctcccctctgcctacctgctgggctcttccaggaattcagtggcc
cggcccccaagacctagacccttcctaccctcccaggagccgagaatgggctctcggcat
caacgcctgcccagggcttcacacctccgggcaccagaagaacagcagcacctggcggta
tctcagcatccctatgcaccacggggctgggggctgagccatgtccgatgcacctctcag
caccccacaggctgcccagtggccccacgccgcgctaggcctcatgacagcagcgggtct
ggagaaagctactgtacagaacgcagcggctacttggcagatggaccagccagtgactcc
agctcagggccctgtcatggctcttccagtgactcggtggtcaactgcacggacatcagt
ctgcagggcatccatggcagcagctctaccttccgcagctccctgagcagtgactttgac
cccttggtatactgcagccctgaaggggatctccaagggaaaggggtgcaacctagtgtg
acttctcgccctcgttccctggactcagtggtgcccacaggggagactcgggtttctagc
cacatccactatcaccgccaccgccaccaccaccaccaccaccacaaaaagcggtttcag
tggcatggcaggaagcccggcccagaaactggggtccctcagtccaggcctagggcttct
cagactctgctccagcgggagccatctttgtcggagcagaagctcaccacgcccaaccca
gcagcttcttcagtgctccccaacacgcaacggcccaggtccctcacagagccagctccc
gacctagtagaagctgccagccccagccccagccccagctccaaccccaacagtcttttg
aacttgcagaaatccagcctccctgtccgacacccacagagaaaacggcggggtggcccc
tcagaacccttgccaacctcccggccccaggccttgactgtgcacccagcatgtcaggtt
ttcccccactacagccccagcctagcatacccttggcccccagaggctcatccactgatc
ttcagacctccaggcctggataggaggctgttacatgaagccccaggcccctgttactcg
agctcacagccagtgtggttgtatctgcccccacgccggcctctgggaccatgctctcct
ggagaggggcattccgagtggagttctgacacgccagagggcagaccatgcccttaccca
cactgccaggtgctaccgggccagcctggctcagaggaggagctcgaggagctgtgtgag
caggctgtgtga
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