Phodopus roborovskii (desert hamster): 127226199
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Entry
127226199 CDS
T08852
Symbol
Pms1
Name
(RefSeq) PMS1 protein homolog 1 isoform X1
KO
K10864
DNA mismatch repair protein PMS1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127226199 (Pms1)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
127226199 (Pms1)
BRITE hierarchy
Motif
Pfam:
DNA_mis_repair
HMG_box
HATPase_c_3
HMG_box_2
HATPase_c
HMG_box_5
Motif
Other DBs
NCBI-GeneID:
127226199
NCBI-ProteinID:
XP_051046081
LinkDB
All DBs
Position
Unknown
AA seq
929 aa
AA seq
DB search
MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG
IKAVDVPVMAVKYYTSKINSHEDLEKLTTYGFRGEALGSICSVAEVVVTTRTAADDFSTQ
YVLDGSGHILSQKPSHLGQGTTVTALKLFKNLPVRKQFYSTAKKCKDELKNVQDLLISYG
VLKPDIRIVFVHNKAVIWQKSRVSDHRMALMSVLGTAVMGNVESVQHHCEESQIHLSGFF
PKLDADHNSTSLSTPERSFIFINNRPVHQKDLLKLIRRYYNLKCLKESARLYPIFFLKID
VPSAELDVNLTPDKSQVLLQNKEHVLIALENLMVTCYGPLPSTESCESNKADVSSANIAA
CETRETDVLFNKMESSGNNYPSADTLAIHFQNDESRKNIDHYLNQQINVNDHCDSHFRSE
HSSINKDTRSTFQNIPMNSSSSEDVQSKYRKTHFAGSSEHSQGENGRNRTDECGGHGGDG
REALLEKPVEICADDWSKGNVFNAMGENIKPVKILVPQKSLACDVSDNSHPTLEPKNLND
GPCSKPSNAIDSRSGQLTAYDLISSRAVKKPLSASALFLQDHRAQFLAEHPKTGLEDATA
QIEALWETLSEEEKLKYEEKAKKDLERYNNQMKKAIEQEPQVSLKDGRKKMRATSAWGLT
QKHKLKASLSNQPKLEELFQSQNEKWKSENMKVAKVPFSMENLKGNFKKQKKVDLEEKDE
ICLIHSLKFPDAWLVTSRTEVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIVLTESLF
NGSHYLEVLHKISAVDQRCSGSTYLSDPRLTANGFKIKLIPGVSSTENYLEIEGMAKCLP
FYGVMDLKEILNAIIDRNAKELYECRPRKVASYLEGEAVRLSRQLPMYLPREDIQDLICR
MKHQFGNDVKGCVHGRPFFHHLTHLPETP
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagttgcctgcagcgacagttcgcctcctctccagttctcagatcatcacgtca
gtggtcagtgttgtaaaagagctcattgaaaactccttggatgctggagccaccagcatt
gatgttaaactggagaactatggatttgataaaattgaggttcgggacaatggcgagggc
atcaaggctgtggatgtacctgtgatggcagtgaaatactacacctcaaagataaacagt
catgaagaccttgagaagctgacaacctatggctttcggggtgaagccttggggtcaatt
tgtagtgttgcagaggtggtagtcacaacaaggacagctgctgatgactttagcacccaa
tatgttttagatggcagtggccacatactttctcagaaaccttcacatcttggtcaaggt
actactgtaactgctcttaagttgtttaagaatctacctgtgaggaagcaattttattca
actgctaaaaagtgtaaagatgaactaaaaaatgtacaggatctccttatcagctacggt
gtccttaaacctgacataaggattgtttttgtacataacaaggcagttatttggcagaag
agtagagtatcagaccacaggatggctctcatgtcggttctgggaactgctgtgatgggc
aacgtggaatctgttcagcaccactgtgaagagtctcagattcacctaagtggattcttc
ccaaagcttgatgcagaccacaattccacaagtctttcaaccccagaaagaagtttcatc
tttattaataatcgaccagtacaccagaaagatctactaaagctaatccgacgttattat
aatctgaagtgcctaaaggaatctgctcggttgtatcccattttctttctgaaaattgat
gttccttcagctgagctggatgtaaatctaacaccagataaaagtcaagtattattacag
aataaggaacatgttttaattgctcttgaaaatctgatggtgacctgttacggaccgcta
cccagtacagagtcttgtgaaagtaacaaagcagatgtttcctcggccaacatagctgct
tgtgaaacaagagaaacagatgtgctctttaataaaatggagtcatctggaaataattat
ccaagtgctgacactttggctattcacttccaaaatgatgaatctagaaaaaacattgat
cattatttaaatcaacagataaatgtaaatgaccactgtgatagtcattttagaagtgaa
cattctagcattaataaggacactagaagtacattccaaaatatccccatgaatagttca
tcatcagaggatgttcagagtaaatacagaaagactcactttgcaggttccagtgagcat
agccaaggagaaaatggcaggaacaggaccgacgagtgtgggggacatgggggagatggg
agagaagcacttcttgagaaacctgtggaaatctgtgcagatgactggagcaagggaaat
gtgttcaatgctatgggagagaatatcaaacctgtgaaaattttagtgccacaaaaaagt
ttagcatgtgacgttagtgataatagtcacccaacccttgaaccaaagaatctcaatgat
ggtccttgtagcaagccgtcaaatgcaatagatagcagatctggacagcttacagcctat
gatttaattagcagtcgagcagtcaagaagcccctgtcagcaagtgccctgtttctccaa
gatcatcgagctcagttcctagcagaacatcccaagactggtttggaggatgcaacagca
cagattgaagcactgtgggagacactgagtgaggaggaaaaactgaaatatgaagaaaaa
gctaaaaaagacttggaacgatacaataatcaaatgaagaaagctattgaacaggagcca
caagtatcattaaaagatggcagaaaaaagatgagggccaccagtgcgtggggcttgaca
caaaaacacaagttgaaagcctccttatctaatcagccaaaacttgaggagctctttcag
tcccagaatgaaaaatggaagagtgaaaatatgaaagtagccaaggtccccttttctatg
gaaaacttaaaagggaattttaagaaacagaagaaagttgatttggaagagaaggatgag
atttgcctgatccacagtctcaagtttcctgatgcatggctagtcacgtccagaacagag
gtcatgttactgaacccatacagagtggaggaagccctgctatttaaaagacttcttgag
aatcataaactccctgcagagccactggaaaagccaattgtgctaacagagagtcttttt
aatgggtctcattatttagaggtgctacataaaatatcagcagttgaccagagatgcagt
ggatcaacttacctgagtgaccctcgtcttacagcaaatggcttcaagatcaaactgata
ccaggagtttccagtactgaaaactacttggaaatagaaggcatggctaagtgtctccca
ttctatggagtgatggatttaaaggaaattcttaatgccatcatagacagaaatgcaaag
gagctctacgaatgcaggccgcgcaaagtggccagttacctggagggagaagcagtccgg
ctgtcaaggcaattacccatgtacttaccaagagaggacatccaagatcttatctgtaga
atgaagcaccagtttggaaatgatgttaaagggtgtgttcatggtcgccctttttttcac
catctaactcatcttccagaaactccatga
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