Phodopus roborovskii (desert hamster): 127226415
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Entry
127226415 CDS
T08852
Symbol
Xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
127226415 (Xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127226415 (Xrcc5)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
127226415 (Xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_PK_bind
Ku_C
DUF6005
CttA_N
VWA
Motif
Other DBs
NCBI-GeneID:
127226415
NCBI-ProteinID:
XP_051046391
LinkDB
All DBs
Position
Unknown
AA seq
732 aa
AA seq
DB search
MAWSANKAAVVLCLDVGVAMGNSFPGEESPFEQAKKVMSMFVQRQVFSESKDEIALVLFG
TDSTENALADDDQYQNITVRRHLMLPDFDLLEDIESKIQLGSRQADFLDALIVCMDLIQR
ETIGKKFGRKHIEVFTDLSSPFSQDQLDVIICNLKKSGISLQFFLPFPISKNHEAEDGGD
CDLGLDHHGPSFPKKGITEQQKEGIHMVQRMMVSLEGEDGLEEIYSFSESLQQLCVFKKI
ERRSMPWPCQLTIGPNLSIQIVAYKSIVPERVKKSWMVVDARTLKKEDIKKETVYCLNDD
DETEVSKEDIIQGFRYGSDIIPFSKVDEEQMKYKSEGKCFSVLGFCRSSQVHRRFFMGYQ
VLKVFAAKDDQAAAVALSSLIHALDELNMVAIVRYAYDKRANPQVGVAFPYIKDSYECLV
YVQLPFMEDLRQYMFSSLKNNKKCTPTEAQLSAIDELIDSMSLVKKSEEEDTIEDLFPTS
KIPNPEFQRLFQCLLHRVLHPQERLPPIQQHILNMLDPPTEMKAKCEIPLSKVRTLFPLT
EAIKKKDQVTAQDIFKDNHEEGPTAKKYKMEKEESHINISSLAEGTVTKVGSVNPVENFR
VLVRQKIATFEEASLQLISHIQQFLDTNETLYFMKSMECIKAFREEAIQFSEEQRFNSFL
EALREKVEIKQLNHFWEIVVQDGVTLITKDEGPGSSVTTEEATKFLAPIDTAKEDAAGFE
EGGDVDDLLDMM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtccgctaataaggcagctgttgtgctgtgtctagatgtgggcgttgccatg
ggtaactcctttcctggagaagaatctccatttgaacaagcaaagaaagtgatgagtatg
tttgtccaacgacaggtcttttctgagagcaaggatgagattgctttagttctctttgga
acagacagcactgagaatgcccttgctgatgacgaccaatatcagaacatcacagtacgc
agacacctgatgctaccagattttgatttgctagaagacatcgaaagcaaaatccaacta
ggctctcgacaagccgacttcttggatgccctgattgtgtgcatggatctgattcagcgt
gaaaccatagggaagaagtttgggaggaagcatattgaagtgttcactgacctcagcagc
ccgttcagccaagatcaactggatgttatcatttgtaacttgaagaagtctggcatctcc
ctgcagttcttcctgccttttccaatcagcaagaaccatgaggctgaggacggaggagat
tgtgacttgggtttggaccaccatggaccttcctttcctaaaaaaggaattactgagcag
caaaaggaaggcatccacatggtacagaggatgatggtgtctttagaaggtgaagatggg
ctggaggagatttattccttcagtgagagtctacagcagctgtgtgtctttaagaagatt
gagaggcgctccatgccctggccctgccagctgaccatcggccccaatttgtctatacag
attgtagcctataaatcgatcgtaccggagagagttaaaaagagctggatggttgtggat
gcaagaaccctaaagaaggaagatattaaaaaagaaactgtctattgcttaaatgacgat
gatgaaactgaagtttccaaagaggacattattcaagggttccgctatggaagcgatata
attcccttttctaaagtggatgaggagcaaatgaaatataaatcggaggggaagtgcttc
tctgttttgggattctgtagatcttctcaggtccataggagattctttatggggtatcaa
gttctaaaggtctttgcagcaaaagatgatcaggcggcggctgttgctctttcttccctt
attcatgctttggatgaattaaacatggttgccatcgttcgatatgcttatgacaaaaga
gctaatcctcaagttggtgtagcctttccttatattaaggattcctatgagtgtttagtt
tatgtgcagctgcctttcatggaagacttgcggcaatacatgttttcatccctgaaaaac
aataagaagtgcactcccacagaggcacagttgagtgctattgatgagctgattgattct
atgagcttggtaaagaaaagcgaggaagaagacaccattgaagacttgtttccaacctcc
aaaattccaaatcccgaatttcagagattgttccagtgtctgctgcacagagtcttacat
ccccaggaacgtctgcccccaattcagcagcacattttgaatatgctggatccccccact
gagatgaaagccaaatgtgagattcctctctctaaagtaaggaccctcttcccgctgacg
gaagccatcaagaaaaaggatcaagtgactgctcaggacattttcaaagacaatcacgaa
gaggggcccactgccaaaaaatataagatggagaaagaagaaagtcatatcaatatctcc
agcctggctgaagggactgtcaccaaggttggaagtgtgaaccctgttgaaaacttccgt
gttctagtgaggcagaagatcgccacctttgaggaggcaagtctccagctaataagtcac
atccagcagtttttggataccaacgaaacactgtattttatgaagagtatggagtgcatc
aaagctttccgggaggaggccatccagttttcagaagagcagcgcttcaacagtttcctt
gaagcccttcgagagaaagtggaaattaagcaattaaatcatttctgggaaatagttgtt
caggatggagttactttgatcaccaaggatgaaggccctggaagctctgtcacaactgag
gaagccacaaagtttctggctcccatagacacggcaaaagaagatgcagcaggatttgaa
gaaggtggcgatgtggatgatttactggacatgatgtag
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