Phodopus roborovskii (desert hamster): 127226422
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Entry
127226422 CDS
T08852
Symbol
Smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127226422 (Smarcal1)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
127226422 (Smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
127226422
NCBI-ProteinID:
XP_051046396
UniProt:
A0AAU9ZGG2
LinkDB
All DBs
Position
Unknown
AA seq
935 aa
AA seq
DB search
MSLPLTEEQKKKIEENRQKALARRAEKLSEQPPSAASGSTVSGPSQPQQGRFVTLPAGSS
QPVGHGVPFKQQNLNNSFPTDQRPHSSDHFQPSIPEPAMGMWKIQGERSTACSNPAPSPA
NISHRQLLGYKSDQGHPQASHKIKLTPIATTMQELMAKGPSSQDTAASSSGPFPRDPELE
AKTVKPSTSGQSGLDTFYALGGETPRTEVGRPPKKLQTSTQKASCLQGTCIRTGDRFRVK
IGYSEELIAVFKSLPSRHYDPVTKTWDFSMTDYRALMNAAKQLSTVSLQPLEGVDGSVRG
QTSLPSAPSLAFVTGRCMLISRARFEVDIGYSEELIALFKQMDSRNYDAKTRKWSFLLEE
HNKLIAKSRDLRQVQLEPLPKTVTLAFASQLEKTSLNARAHVPEADLSGVDAKLVSNLMP
FQREGVSFAISKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRFTWEQAFL
RWLPSLNPENINVVVTGKGRLTAGLVNIVSFDLLSKLEKQLKTPFKVVIIDESHFLKNIK
TARCRAAVPILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFFPQFHAFGLRYCDAKRL
PWGWDYSGSSNLGELKLLLEEAIMLRRLKSDVLSQLPAKQRKMVLVNPGRISTRAKAALD
AAAKEMTKNKTKQQQKEALIVFFNRTAEAKIPCVIEYILDLLESGREKFLVFAHHKVVLD
AVVKELERKKVQNIRIDGSTPSADREDLCQQFQLSKGHTVAVLSITAANMGLTFSSADLV
VFAELFWNPGVLIQAEDRVHRIGQTNSVGIHYLVAKGTADDYLWPLIQEKIKVLGEAGLS
ETNFSEMTEATDYLYKDPKQKTIYDLVQQSFEEDGNDMEFLEAAESFDPGSTSGTSGSSS
QDLGDLLDDNTLTDSPPQKRRFEFFDNWDSFTFPF
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgccacttacagaggagcagaagaaaaagattgaagagaatcgacaaaaggct
ctggcccgtcgagctgagaagttatcagaacagcccccaagcgcagcttcaggctccact
gtttctggcccttcccaaccccagcagggccgttttgtgactctcccagcagggtcttct
cagccagtaggccatggtgtccctttcaagcaacagaatctcaataattcattccctact
gaccagagacctcacagttccgaccattttcagcccagcataccagaacccgcaatgggg
atgtggaagattcaaggagagagatctacagcatgctctaaccctgccccaagtcctgcg
aacatctctcaccgacagcttttgggttataagtcagatcagggtcatccccaggcttct
cataagatcaagttgacacccattgctaccacaatgcaggagctgatggctaaaggaccg
agttcccaagacacagcagcttcctcctctggaccatttcccagggatccggagttagag
gccaagacagtgaagccctctacctctgggcagagtggtttagacactttttatgcctta
gggggggaaacacctagaacagaggtggggagacccccaaagaaactgcaaacctcaacc
caaaaagcaagctgtctgcaaggaacttgcataaggactggagatcgttttcgggtaaag
attggctacagtgaagagctcattgcggtgtttaaatctctgcccagcagacactatgat
cctgttaccaagacatgggacttcagcatgactgactacagagccttgatgaatgcagcc
aagcaactctccacggtctccctacagccattggaaggggttgatggcagtgtcagggga
cagaccagccttccctcagctccttcccttgcctttgtcacagggaggtgcatgctcatc
tcccgggcccgctttgaggttgacattggctattcggaggagttgatcgcactctttaaa
cagatggactccaggaattacgatgccaagaccaggaagtggagctttcttctggaggag
cacaacaaactgattgcaaagtcacgtgatctccgacaagttcagctggaacctctgccc
aagacagtgaccctggcatttgcatctcagctggagaagacgtctctcaatgccagagcc
catgtgcctgaagctgacctttccggagtggatgccaagcttgtgtctaatctcatgccc
tttcagagagagggcgttagctttgccatatccaaaagaggccgcctactacttgctgat
gacatgggcctggggaagaccatccaggccatctgtatagcagccttttacagaaaggaa
tggccactcctggtggtcgtgccttcctctgtgcgcttcacctgggagcaggcctttctt
cggtggctgccatctctgaacccagagaacatcaacgtggtggtaaccgggaagggccgc
ctaacagctggcttggtcaacattgttagttttgatcttcttagcaagttggaaaagcag
ctaaaaacccctttcaaagtcgtcattattgacgaatcacacttcctcaaaaacattaag
actgcccgttgccgagcagctgtgcctatcctaaaggttgccaagagggtgatcctgctg
tcaggcacgccagccatgtcccggcctgcagagctctacacacagatcattgctgtcaag
ccaacattcttccctcagtttcacgcctttggacttcgctactgtgatgccaagcggctc
ccttggggctgggactactcaggctcctccaacctgggcgagctgaaactgctgctggag
gaggcaatcatgctgaggcgactcaaatctgatgtcctttcccagcttccagccaagcag
cgcaagatggtgttggtcaaccctggtcggatcagcaccagggccaaagcggccctggat
gcagcagccaaagaaatgaccaagaacaaaactaaacagcagcagaaagaagccctcatt
gtcttcttcaacagaacagcagaagctaaaatcccctgcgtcattgaatatatcctggac
cttttggagagtggacgagagaagtttctagtgtttgcacaccataaggtggttctggat
gctgttgtaaaggagcttgagaggaagaaagttcagaacatccgaattgacggctccacc
ccgtcagcagaccgtgaggatctgtgccagcagttccagctgtccaaagggcacacagtg
gcagtgctgtccatcactgccgccaatatgggcctcaccttctcctcagctgatctggtg
gtgtttgctgagctcttttggaacccaggggtgctgatccaggctgaggaccgcgtgcac
cgcattggacagacaaactctgtgggcattcactacctggtggcaaaaggcacagcagat
gactacctttggcctctgattcaagagaagattaaagttctgggggaagcagggctttct
gagaccaatttctcagaaatgacggaagctactgattatctctacaaggacccaaagcag
aagacaatctatgacctagtccagcagtcctttgaagaagacggaaatgatatggaattc
ctggaagcagcagagtcctttgacccaggaagtacttcaggaacctctggaagtagttcc
caggatctgggagacctcttggatgataacactttgacagacagtcctccacagaaaagg
agatttgaattttttgataattgggacagctttacttttcccttttaa
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integrated database retrieval system
