Phodopus roborovskii (desert hamster): 127226502 Help Entry 127226502         CDS       T08852                                  Symbol Col4a3 Name (RefSeq) collagen alpha-3(IV) chain   KO K06237   collagen type IV alpha Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04151   PI3K-Akt signaling pathway prob04382   Cornified envelope formation prob04510   Focal adhesion prob04512   ECM-receptor interaction prob04820   Cytoskeleton in muscle cells prob04926   Relaxin signaling pathway prob04933   AGE-RAGE signaling pathway in diabetic complications prob04974   Protein digestion and absorption prob05146   Amoebiasis prob05165   Human papillomavirus infection prob05200   Pathways in cancer prob05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:prob00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     127226502 (Col4a3)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127226502 (Col4a3)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127226502 (Col4a3)   09142 Cell motility    04820 Cytoskeleton in muscle cells     127226502 (Col4a3)  09150 Organismal Systems   09152 Endocrine system    04926 Relaxin signaling pathway     127226502 (Col4a3)   09154 Digestive system    04974 Protein digestion and absorption     127226502 (Col4a3)   09158 Development and regeneration    04382 Cornified envelope formation     127226502 (Col4a3)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     127226502 (Col4a3)   09162 Cancer: specific types    05222 Small cell lung cancer     127226502 (Col4a3)   09172 Infectious disease: viral    05165 Human papillomavirus infection     127226502 (Col4a3)   09174 Infectious disease: parasitic    05146 Amoebiasis     127226502 (Col4a3)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     127226502 (Col4a3)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:prob04147]     127226502 (Col4a3)    00536 Glycosaminoglycan binding proteins [BR:prob00536]     127226502 (Col4a3) Exosome [BR:prob04147]  Exosomal proteins   Exosomal proteins of other cancer cells    127226502 (Col4a3) Glycosaminoglycan binding proteins [BR:prob00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127226502 (Col4a3) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  127226502 NCBI-ProteinID:  XP_051046528 LinkDB All DBs Position Unknown AA seq 1671 aa AA seqDB search MHAEAAPRLQALLLPILLLLLAIPSVVSKGCVCKGKGQCLCVGTKGEKGEKGYPGPPGFP GQKGFPGPEGFAGPQGPKGSPGLPGLTGPKGIRGITGLPGFSGPPGLPGIPGHPGPPGLD GLPGCNGSKGEQGFPGIPGTPGYLGLPGPIGVKGQKGEPAQEGDRRFDGKGDPGPPGPPG FQGFPGPPGFPGPAGPPGPQGDFGFPGAVGPRGPKGHMGDYAIGEKGEKGEKGLTGPPGP EGTVIVTLLRPYNKSDFEGEKGDKGEMGEPGRPGSPGPPGDSYGSEKGIPGEPGPRGKPG KDGAPGFPGTEGAKGSRGFPGLMGESGIKGWKGDIGPPGFPGPTVYYDSSYLEKGEKGMP GPPGPKGARGPQGPSGPPGVPGSPGPSKPGLRGPPGWPGLKGNKGERGPPGKDTMGPPGP LGCPGSPGLPGPPGPPGHPGDVLFHPGPPGDHGVPGSIGPPGDPGIDGSKGEPGLPCTQC LCMPGPPGLPGFPGLDGVKGIPGGRGTPGMRGNSGSPGSAGLPGFAGFPGDQGHPGLKGS KGETPLPWGQVGDPGDPGLRGLPGRKGFDGIPGRPGAKGLPGPRGEPALSGSKGDQGPPG APGSPGPPGPAGPAGPPDYGPQGETGPKGTQGVPGAPGPPGEAGLKGEPGTSTPVPGPPG PPGHPGQAGRRGLPGLPGPMGKCDPGLPGPDGEPGIPGAGFPGPPGPKGDQGFPGTKGSP GCPGEIGKPGRPGEPGHPGAKGEAGLGMPGEPGKRGFPGERGDSGENGEIGLPGLPGLPG SPGKEGLDGPPGDSGQPGPPGVKGPPGRCTQGPKGVQGLPGLNGLKGQPGRRGDAGPKGD PGIPGLDRSGVPGEPGPPGMPGHPGEMGPPGQKGYPGTSGPPGPPGKKGEVGMMGYPGTI GPPGPPGELGSQGQRGSLGIPGVKGERGRPGAKGERGEKGIPGLSQIQHLKGEKGEPGLK GFVGNPGEKGNRGIPGLPGLKGLEGLPGLPGPPGPRGDMGRSGNPGGPGPGGMPGSMGNM GVPGPKGNKGTLGLPGLAGRPGHPGSHGPQGDKGEQGHAEGARPGLPGPKGDPGLPGDKG KKGERGLPGPPGQSGPAGPDGTLGNPGSPGYPGNPGPGGDLGLKGKKGFPGSPGSTGLPG PPGLPGPPGPMGVRGNQGHDGIPGPPGEKGETGLLGAFPGPEGSPGVPGVKGDKGAPGLP GLSGRKGSMGDVGPRGPPGIRGLPGPPGLPGALVPGPKGNRGLPGPRGNPGKPGPRGPPG HIVKGVKGDKGYMGQPGPKGLPGDVGGIGPPGHPGAPGTPGLPGLRGDPGFPGFPGIKGE KGNPGFLGSIGHPGPPGPKGPPGARGKPGTLKIISLPGSPGPPGPPGQPGMKGDPGPLGP PGIPGPCGPRGKPGKDGKPGSPGPVGEKGNKGSKGQQGPPGLDGLPGLKGKPGDRGTPAS GTRIRGFVFTRHSQTTATPSCPEGTRPLYSGFSLLFVQGNERAHGQDLGTLGSCLQRFTT MPFLFCNINNVCNFASRNDYSYWLSTPALVPMDMAPITGRALEPYISRCTVCEGPAMAIA VHSQTTAIPPCPHGWVSLWKGFSFVMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGR GTCNYYSNSYSFWLASLSPERMFRKPIPSTVKAGNLDKIISRCQVCMKKRP NT seq 5016 nt NT seq  +upstreamnt  +downstreamnt atgcatgctgaggctgctccaaggttgcaggcactcctgctgcctatcttgctgctgctc ctggccataccatctgtggttagcaagggctgtgtctgcaaaggcaagggccagtgtctc tgcgtggggaccaaaggggagaagggggagaaaggctatcctggaccccctggttttcct ggccagaaaggatttccaggtcctgaaggctttgctggaccacagggacccaagggctct ccaggacttccaggactcactggtcccaaaggcatcaggggaataactggattaccagga ttttcaggtcctcctggacttccaggcatcccaggccaccctgggcctcctgggctggat ggtctaccaggatgcaatggttctaagggtgaacaaggattcccaggtattcctgggaca ccaggctatttggggctcccaggtcctattggtgtgaaaggacaaaagggtgagcctgct caagaaggagacaggagattcgatggaaaaggtgaccctgggcctccagggcctccaggc ttccagggttttccaggccccccaggttttccagggcctgctggtccaccaggtcctcag ggagattttggttttccaggtgctgtgggacccagaggaccaaaaggtcatatgggtgac tatgccataggagaaaaaggagaaaagggtgagaaaggattaacaggacctcctgggcct gaaggaaccgtgattgttacactcctccgcccatacaacaaatcggactttgagggggag aaaggagataagggagagatgggtgaacctggacgtcctggatccccgggaccacctgga gactcctatggatcagaaaagggtattcctggagaacctggcccaagggggaaacctgga aaagatggtgctcctggcttccctggcactgagggagccaagggcagcaggggctttcct gggttaatgggtgaatctggcattaagggatggaaaggagacattggccctccaggattt cctggtcctacagtatactatgactcgtcatacctggaaaagggagagaaaggaatgcca ggcccacctgggcccaaaggtgctcgtggcccacagggtcctagtggtccccctggagtt cctggaagccctggaccatcaaagcctggcctcagaggacccccaggatggccaggcttg aaaggaaataagggggagagaggcccccctggaaaggacactatgggccctccaggaccc ctgggctgccctggttcgccaggtctgccaggcccaccaggccctccaggacatccaggt gacgttctttttcaccctggtccacctggtgaccatggcgtgccaggcagtataggacct ccaggagacccaggaattgatgggtccaaaggagaaccaggccttccgtgtacacagtgc ctttgcatgccagggccccctggtctccccggatttccaggattagatggtgtcaaagga atcccaggaggacgaggcacacctggtatgagaggaaactcggggtcccctggaagtgcg ggtctcccaggatttgcaggattcccaggggaccaaggacacccaggactgaaaggaagc aaaggtgaaacacccctaccctgggggcaagtgggtgacccaggcgatcctgggctcaga ggcctgccagggagaaagggcttcgatggaatccctggaagaccaggagctaaaggactg ccaggacctagaggtgaaccggccctgagtggaagcaaaggggaccagggacctccaggg gctcctggatcacctgggcctccaggacctgcaggaccagctggaccaccagactatgga cctcaaggagaaacaggtccaaaagggacacaaggagttcctggagccccgggaccacct ggagaagccggtcttaaaggagaacctggcacatcaacaccggttccaggtcccccagga cctccagggcatcctggtcaggctggccgacgaggtctacctgggttgcctggacctatg ggaaaatgtgatcctggtcttcccggacctgatggagaaccagggatcccaggagctgga tttcctgggcctccaggacctaagggtgatcaaggtttcccaggaacaaaaggatcacct ggttgtcctggggaaattggaaagccaggccgtcctggagagccaggccacccaggagcc aagggagaagcaggactaggcatgcctggggaaccaggaaaacgcggcttcccaggagaa agaggcgattctggggaaaatggagaaattggactccctgggcttccaggcctccctgga tctccaggaaaagaagggcttgatgggcctccaggagactcaggacagcctggaccacct ggagtaaaagggcctccagggaggtgcacacagggacccaagggtgtccaaggacttccg ggattaaatggattgaaagggcaaccaggtagaagaggtgatgcggggccaaagggagac cctggcatcccaggcttggacaggtcaggagttcctggagaacctggaccgccgggaatg ccgggtcacccaggtgagatgggaccacctggccagaaaggatatccaggaacttcagga cccccaggcccaccaggcaagaaaggagaggttgggatgatgggctatcctggaaccatt ggtccaccaggacctcctggggaactaggttcacaggggcagagaggcagccttggaatc ccaggagtaaagggggaaagaggacgcccgggagccaaaggtgaacgaggagaaaaggga attcccggactttcccaaatccaacacttaaagggggaaaaaggagaacccgggctcaaa ggatttgtaggaaatccgggtgaaaaaggaaacagaggaattccagggttaccaggtctg aaaggcctcgagggattgcctgggctaccaggacctccaggccctagaggagatatggga cgcagtgggaatcccggaggaccaggaccaggcggcatgccaggaagcatggggaacatg ggtgtgccaggccctaaggggaataaaggaactttgggactgccaggtcttgctggaaga ccaggacatccagggagtcatggtccccaaggggataagggggaacaaggtcatgcagaa ggtgcaaggccgggactcccgggacctaagggtgatccaggactgccaggtgacaaagga aagaaaggagagagaggcctacctgggccacctggacagtcggggcctgctggacctgat ggaacccttgggaaccctgggagtcctggctacccagggaatccgggtcctggtggtgat ttgggtctgaaaggaaagaaaggcttccccggctctccaggaagcactggccttccaggc cctccaggactcccaggacctcctgggccaatgggtgtgagaggtaaccaagggcatgat ggaattcctggtccacctggggaaaagggagaaacaggcttgctgggtgcctttccaggc ccagaagggagccctggtgttccaggtgtcaaaggagacaagggagctccaggcttgcct ggcctctctggcaggaagggctccatgggagatgttggacctcgaggacccccaggcatc aggggactcccaggaccaccaggtctacctggggcacttgtccctggcccaaaaggaaac agaggtctgcctggcccaagaggaaatccaggtaaaccaggcccccggggacctccagga catatcgtaaaaggcgtaaaaggtgataaaggatatatgggccaacctggccccaaaggt ctacctggagatgtaggcggcataggcccaccaggtcacccgggagcaccaggcacccca ggccttccaggtctcagaggtgatcccggattccctggatttccaggcataaaaggagag aagggtaatccaggatttcttggatcaattggacatccaggaccaccagggccaaaagga ccacctggtgcacgtggaaaaccaggcacacttaagatcatctcccttccgggaagccca ggcccacctggtccacctggacaaccaggaatgaaaggagatcctgggccactgggacca cctggaatcccagggccctgtggaccaagaggcaaaccaggcaaggatggaaaaccagga tctccaggaccagttggtgaaaagggcaacaaaggctctaagggccaacaaggaccacct ggattggatggattgccaggcttaaaagggaaacctggagacagaggaacacctgcctct gggacaagaattcgagggtttgtcttcacccggcacagtcaaaccacagccactccttca tgtcctgaaggaacacgaccactctacagtgggttttctcttctttttgtacaagggaac gaacgtgcacatggacaagaccttggcaccctgggcagttgcctccagcgattcaccaca atgccattcttattctgtaacatcaataatgtatgtaattttgcatcacggaatgattat tcatactggctgtcaacaccagctttggtgccaatggacatggctccaattactggcaga gctcttgaaccctatattagcagatgtactgtttgtgaaggtcctgcgatggccatagct gttcacagccaaactactgctatccctccatgtccccatggctgggtctctctctggaaa ggtttttccttcgttatgttcacaagtgcaggctctgagggcgctggccaagcacttgca tcacctggctcctgcctggaggaattccgagccagtccgtttatagaatgccacggacgg gggacatgtaactactactcaaactcctatagtttctggctggcttcattaagcccagaa agaatgttcagaaaacctattccatcaactgtgaaagctggaaatttagacaaaatcata agccgctgtcaggtgtgcatgaagaaaagaccctga

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