Phodopus roborovskii (desert hamster): 127226515
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Entry
127226515 CDS
T08852
Symbol
Trip12
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127226515 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127226515 (Trip12)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127226515 (Trip12)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
HECT type E3
127226515 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
127226515
NCBI-ProteinID:
XP_051046565
LinkDB
All DBs
Position
Unknown
AA seq
2033 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKHKGYIPPESRKSNFKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTGSPSSAKKPRAFQHIESVSGTNKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
VAAGSSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQRSSKSET
SKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGA
AEARRQEKMADPESNQETVNSSAARTDEAPQGAAASSSVAGAVGMTTSGESESDDSEMGR
LQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQASDESQQLQAVIEM
CQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVD
AIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNA
LAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQ
QVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFL
LCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGA
IWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTAR
AIQRKPNPLANTNTSGYSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAV
RHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLP
DIFSVYFRREGVMHQVKHLAESESLLTSPPKACTNGSGSLGSTTPASSGTATAATNASAD
LGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTT
QSPKSSFLASLNPKTWGRLSAQSNSNNIEPARSAGVSGLARAASKDTISNNREKIKGWIK
EQAHKFVERYFSSENMDGSNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVS
SFEIQHSGFVKQLLMYLTSKSEKDAVSREIRLKRFLHVFFSSPLPGEEPIGRVEPVGHAP
LLALVHKMNNCLSQMEQFPVKVHDFPSGNGSGGRGSQALKFFNTHQLKCQLQRHPDCANV
KQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGN
VRHRLQFYIGEHLLPYNMTVYQAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYK
PVREDEESSKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPP
ENITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDP
LVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQD
SRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVS
QELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRF
LGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQK
KRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLE
EYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTL
MECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIV
RKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cataagggatatatccctcctgagagtagaaaatctaattttaaggcacccaaagtgcaa
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttctgaaaggcag
aaaacggggcaggtgcctaagaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccggttctcctagctctgcgaaaaagcccagagcatttcaacacatc
gagtctgtctcaggaaccaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaattgccatcaacaagcaaggctcacaccagaaagagt
gtggctgctggtagttcacggagtcagaaaagaaagaggacagagagttcttgtgtaaag
agtggatctgggtctgaatcaactggtgccgaagagagatctgcaaaacccaccaagctg
gcttcaaaatcagccacctcagccaaagctgggtgtagcaccatcaccgattcttcttct
gctgcttctacttcctcctcatcttcggctgtagcctcggcctcttctactgtaccacct
ggtgccagggtgaaacaaggaaaagaccaaaacaaggccaggcgttcccgttcagcatcc
agccctagtcccagaagaagcagcagggaaaaagaacagaggtcttctaagtcagagaca
tcaaaacctggaccttctggattacaggccaaattagcaagtttaagaaagtctaccaag
aagcgcagtgagtccccacctgctgagctccccagtttgaggaggagcacacgccaaaag
accacgggctcctgtgctagtaccagtcggcgaggctctggcctgggcaagagaggagca
gctgaggcccggcggcaagagaaaatggcagaccctgaaagcaatcaggagacagtgaat
tcctcagctgcccggacagatgaagctccccaaggagctgcagcctctagttctgttgca
ggggctgttggcatgaccacctctggggagagtgaatcggatgattctgagatgggacga
ttacaagccctgttggaggccagaggtcttcctcctcacctgtttggtcctcttggtcct
cggatgtcacagcttttccatagaacaattggaagtggagctagttctaaggcccaacag
cttcttcaaggactacaagcaagtgatgagagtcaacaacttcaggcagtcattgaaatg
tgtcagctattggtcatgggaaacgaggagacacttggagggtttcctgtgaagagtgtt
gttccagctttgataacattactgcaaatggagcataattttgacattatgaaccatgct
tgccgagccttaacctatatgatggaagcgctccctcgatcatctgctgttgtagtagat
gctatcccagtcttcttagaaaagctgcaagttattcagtgtattgatgtggcagagcag
gccttaactgccttggagatgttatcacggcggcatagtaaagccattttacaggcgggt
ggtttggcagactgcttgctgtatctagaattcttcagcataaatgcccaaagaaatgca
ctagcaattgcagccaattgctgccagagtatcacaccagatgagtttcattttgtggca
gattccctaccattgcttacccaaaggctaactcatcaggacaaaaagtcagtagaaagc
acttgcctttgttttgcacgtctagtggacaactttcaacatgaggaaaatttactgcag
caggttgcttccaaagatctgcttacaaatgttcaacaactgttggtagtgacgccgccc
attttgagttctgggatgtttataatggtggttcgcatgttttctttgatgtgttccaac
tgcccaacgttagctgttcaacttatgaaacaaaacattgcagaaacacttcacttcctc
ctgtgtggtgcctccaatggaagttgtcaagagcagattgatcttgttccacgaagtcct
caagaactgtatgaactgacatctcttatttgtgaacttatgccatgtttacctaaagaa
ggcatttttgcagttgataccatgttgaagaagggaaatgcacagaacacagatggtgca
atctggcagtggcgggatgaccgaggcctctggcatccctataacaggattgacagccgg
atcattgaggcagcccatcaggtcggtgaggatgagataagcttgtccactctgggacga
gtttatactattgattttaattctatgcagcaaatcaatgaggacacgggaacagcacgt
gccattcagagaaaacctaatcccttagccaatactaacactagtggatactcagagtta
aagaaggatgatgctcgagcacagctaatgaaagaagatccggaactggctaagtctttc
attaagaccttattcggtgttctctatgaagtgtacagctcctcagcaggacctgcggtc
agacataagtgccttagagcaattcttaggataatttattttgctgatgctgaacttctg
aaggatgttctgaaaaatcatgctgtttccagtcacattgcctccatgctatcaagccaa
gacctgaagatagtagttggagcacttcagatggcagagatcttaatgcaaaagttacct
gatatatttagtgtttacttcagaagagaaggtgtcatgcatcaagtaaaacatttagca
gaatcagagtctttgttgacaagtccaccaaaggcgtgtacaaatgggtcaggatccctg
gggtccacaacaccagccagcagtgggacagccacagctgcaaccaatgcctctgctgat
ctggggtcacccagcttgcagcatagcagagatgattctctggacctgagccctcaaggt
cgattaagtgatgttcttaagagaaaacgactgccaaaacgagggccaagaaggccaaag
tattcacctccaagagatgatgacaaagtagacaatcaagctaaaagccccaccactact
cagtcacctaaatcttccttcctggcaagcttgaatccaaaaacatggggaaggttaagt
gcacagtccaacagcaacaacatcgagcctgcaagatctgcaggagttagtggtcttgct
cgggcagcctcaaaagacaccatatccaataatagagaaaaaattaaaggttggattaag
gagcaggcacataaatttgttgaacgttattttagttctgagaacatggatggaagcaac
cctgccttgaatgtacttcagagactttgtgctgcaactgaacaactcaacctccaggtg
gatggtggagctgagtgccttgtagaaatccgtagcatagtctccgagtcagatgtttca
tcatttgaaatccaacatagtgggtttgtgaaacagctgttgatgtacttgacatctaaa
agtgaaaaagatgctgtcagcagagagatccggttaaagcgattcctacatgtatttttt
tcttctccacttcccggagaagagcccattggaagagtagaaccagtgggccacgcgcct
ttgttggcactagttcacaaaatgaataactgcctcagccaaatggaacagtttccagtc
aaagtgcatgatttccctagtggaaatggatctggaggcagaggatcacaagctttaaaa
tttttcaacacacatcagttaaaatgtcagttacaaagacacccagactgtgcaaatgtg
aagcagtggaaaggtggtcctgtcaagattgaccccctggctttggtgcaagctattgaa
agataccttgtggttagaggatatggaagagtaagagaagatgatgaagacagtgatgat
gatggatcagatgaggaaatagatgagtctctggctgctcagtttttaaattcaggaaat
gtaagacataggctacagttttatattggagaacatttactaccatataacatgacggta
taccaagcagtgcggcagttcagtgtacaggctgaagatgaaagggaatctactgatgat
gagagcaatcctctgggaagagctggtatttggacaaaaactcatacaatatggtacaaa
cctgtgagagaggatgaagaaagtagtaaagattgtgttggtggcaaaagggggagagcc
caaacagctccaacaaaaacctcccccagaaatgcaaagaagcacgatgagttatggcat
gatggagtgtgtccatcagtagcaaatcctttagaagtttacctcattcccacaccacct
gaaaatattacctttgaagacccatctttagatgtgatcctcctcttaagagttttacac
gccatcagtcgatactggtattacttgtatgataatgcgatgtgcaaggagattattcca
actagtgaatttattaatagtaagttaacagcaaaagcgaataggcagcttcaagatcct
ctagtaatcatgacaggaaacatcccaacatggctcaccgagctaggaaaaacctgccca
tttttctttccttttgatacccgacaaatgcttttttatgtaactgcatttgatcgggac
cgggcaatgcaaagattacttgataccaacccagaaatcaaccagtctgattcacaagac
agcagagttgcacctagattggatagaaaaaagcgcactgtgaacagagaggagctgcta
aaacaagctgagtctgtgatgcaggaccttggtagttctcgggccatgttagaaatccag
tatgaaaatgaggttggtacaggtcttgggccgacactggagttttatgcacttgtttct
caggaactacagagggcagatttgggtctctggagaggtgaagaagtaactcttagcaac
ccaaaaggaagccaagaagggaccaagtatattcaaaacctccagggcctgtttgcgctt
ccctttggtaggacagctaagccagctcatatcgcaaaggttaagatgaagtttcgcttc
ttaggaaaattaatggctaaggctatcatggatttcagattggtggaccttccccttggc
ctgcctttttataagtggatgctgaggcaggaaacttcactgacatctcatgatttattt
gatattgatcctgttgtagccagatcagtatatcacctagaagatattgttagacagaag
aaaagactggagcaggacaaatcccagaccaaagaaagtctgcagtatgcgttggaaact
cttacaatgaatggctgctctgtggaagatctgggattggactttacactgccggggttt
cccaacattgaactgaagaaaggagggaaggatataccagtcactatccataatttagag
gaatacctgagattggtgatattctgggcactaaacgaaggtgtttctaggcagtttgac
tcgttcagagatggatttgaatccgttttcccactcagtcatcttcagtacttctaccca
gaagaactggatcagctcctgtgcggcagtaaagcagacacttgggatgcaaagacattg
atggaatgctgcaggcctgatcatgggtatactcatgacagtcgggctgtgaagttcttg
tttgagattctcagtagttttgataatgaacagcagaggttatttctccagtttgtgact
ggtagcccacgattgccggttggagggttccggagtttaaatccacctctgacaattgtg
cggaagacatttgaatcaacagaaaacccagatgacttcttaccctctgtaatgacttgt
gtgaactatcttaagttgccggactattcgagcattgagataatgcgtgacaaactgttg
atagcagcaagagaaggccaacagtcgttccatctttcctga
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integrated database retrieval system
