Phodopus roborovskii (desert hamster): 127226593
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Entry
127226593 CDS
T08852
Symbol
Sned1
Name
(RefSeq) LOW QUALITY PROTEIN: sushi, nidogen and EGF-like domain-containing protein 1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
prob04990
]
127226593 (Sned1)
Domain-containing proteins not elsewhere classified [BR:
prob04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
127226593 (Sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
NIDO
EGF_TEN
fn3
EGF_2
EGF_CA
Fn3_Dep-1_4th
cEGF
Ig_DSCAM-DSCAML_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
127226593
NCBI-ProteinID:
XP_051046620
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MRGGAAWTLLLAAALGLGARGVRAAVALADFYPFGTKRGDAVTPKQDDGGSGLQPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPAVLQRATEDIRRYFPELPDFSATWVFVATWYRVTFFGGSPSSPVNTFQIVLITDGR
FSFTIFNYESVLWTTGTHASSGGDADGLGGIAAQAGFNAGDGHRYFNIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCGHTTSVCLVLRPCLNGGKCIDDCVTGNPSYTCSCL
AGFTGRRCHLDVNECASHPCLNGGTCTHGVNSFSCQCPAGFKGLTCESAQSPCDNKVCQN
GGRCQAESSSAACVCQAGYTGATCETDVDECNPDPCLNGGSCVDLVGNYSCVCVEPFEGP
RCETGSYPVPSPCLSSPCQNGGTCVEADQGYVCECPEGFVGLDCRERIPNDCECRNGGSC
LGANTTLCQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNISHS
LPSPCDSDPCFNGGSCDAHDDSYTCECPRGFHGRHCEKARPHLCSSGPCRNGGTCKETGN
EYHCTCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNGGTCEDRGADFFCRCQPGYTGHRCQAEADCGRPEEVKHATMRFNGTHVGSVA
LYTCDRGFSPSALSHMRICQPQGVWSQPPQCIEVDECQSQPCLHGGSCQDLTAGYQCLCS
PGYEGVHCELETDECQAQPCRNGGSCRDLPGAFICQCPEGFTGGHCETEVDACASSPCQH
GGRCEDGGGAYLCVCPEGFFGYHCETVSDPCFSSPCGGRGYCLASNGSHSCTCKVGYTGK
GCTKELLPPTALRVERVEESGVSISWSPPEGTVARQMLDGYAVTYASSDGSSRRTDFVDR
SRSSHQLRALAAGRAYNISVFSVKRNTNNKNDISRPVVLPVRTRPRAIEDFDVTNVSANA
ISVQWALHRIQHVTVSRVRVSILHPEASVAQSTEVDRSVDRVTFGDLLPGRRYTVQLTTL
SGPGGADYPTESLASAPLNVWTRPLPPANLTASRVTATSAHVVWDTPTSGISLEAYVINV
TTSQSTKSRYIPNGKLVSYTVRDLLPGRRYQLSVTAVQSTEQGQLHSEPAHLYIITSSRD
GTDRRWHQGGHPLRMLRNRPAPVRLPELHLLNDHSAPETPTQPPRFSELVDGRGRVSARF
GGLPSKSVTVRSQPTTLAPLKNTEEAPEQVRLALQLPKNSSKDTESAPGGCSEGACQNGG
TCVPGANAHSCDCRPGFKGRHCELACEKVPRPCTRLFSETKSFPVWEGDVCHHVYKKVYK
VHQDICFKERCESTSLKXTPNRKQSDSQTLKKS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcggcgccgcatggacgctgctgctggccgcagccctggggctcggggcgcgc
ggggtgcgcgctgcggtggccctcgccgacttctacccgttcggcacgaagcgcggcgac
gccgtcaccccgaaacaggacgacggcggctcagggctgcagcccctctcggtgcccttc
ccgttcttcggcgccgagcactccggactctacgtgaacaacaacgggatcatctccttc
ctgaaggaggtttctcagttcacccccgtggccttccccattgccaaagaccgctgtgtg
gtagcagccttctgggcagatgtggacaaccgacgcgcgggtgacgtctactaccgggag
gccactgacccagccgtgctgcagagagccacagaggacatcagacggtactttcctgag
ctcccggacttctctgctacctgggtttttgttgccacctggtaccgtgtgaccttcttt
ggaggcagtccctcttcccccgtcaacacattccaaatagtgctcatcactgacggcagg
ttctctttcaccatcttcaactatgagtctgtcttgtggaccacaggcacacacgccagc
agcgggggtgatgctgacggcctgggaggaatcgcagcccaggctggtttcaacgcaggt
gatgggcaccgttacttcaacatccctgggtcacgcacagcagacatggctgaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgtttagaatcgatgatgcccaggtg
cgcgtggggggctgcggccatacaacctctgtgtgcctggtcctgcgtccgtgcctcaat
ggtggcaagtgcattgatgactgtgtcacaggcaacccctcctacacctgctcctgcctc
gctggcttcacagggcggaggtgccacctggatgtgaacgagtgtgcttcccacccatgt
ctaaacggtgggacctgcacccatggtgtcaacagcttcagctgccagtgccccgccggc
ttcaagggactcacctgtgaatcagcccagtctccgtgtgacaacaaagtgtgtcaaaat
ggcggccggtgccaggcagagagcagctctgcagcttgtgtgtgccaggctgggtacact
ggggccacctgtgagacagatgtggatgaatgcaaccctgacccatgcctgaatggagga
tcctgtgtcgacctggttgggaactacagctgtgtttgtgtggagccctttgagggacct
cgatgtgagacagggagctacccagtgccttccccctgcctctccagtccctgccagaat
gggggtacctgtgtagaagcggatcagggatatgtgtgtgaatgtcctgaaggcttcgtg
ggcttggactgcagagagagaattcctaatgactgtgagtgccggaacggtggcagctgc
ctgggggccaacaccaccctctgccagtgtcctccaggcttctttgggctcctttgtgaa
tttgaagtcacagccacgccctgcaacatgaacacacagtgtccagacggaggctactgc
atggagtatggtgggagctacctgtgtgtctgccacacagaccacaacatcagccactct
ctgccgtcaccctgcgattccgacccttgctttaatggaggctcctgtgacgcccacgac
gactcctacacgtgtgagtgcccacgtggattccacggcaggcactgcgagaaagcccgg
ccacacctctgcagctcagggccctgccggaatggcggcacatgcaaagagacaggcaat
gagtaccactgcacctgcccttaccgcttcaccgggagacactgtgagattggaaagcca
gactcctgtgcctccggcccctgtcacaacggtggcacttgctttcactacattggcaaa
tacaagtgtgactgccctccaggcttctctgggcggcactgcgagatagccccctccccc
tgcttccggagcccatgcatgaatgggggtacctgtgaggaccgaggggcagatttcttc
tgccgctgccagccggggtatacaggacaccggtgtcaggcagaggcggactgtggtcgc
cctgaggaggtgaagcatgctaccatgcgcttcaatggaactcacgtgggctcagtggcc
ctgtacacgtgtgaccgtggcttcagcccgagtgccctcagccatatgcgtatctgccag
ccacaaggtgtctggagccagcctccccagtgcattgaagtagatgagtgccagtctcag
ccatgtctgcatggaggctcctgccaggatctcactgctggttaccagtgcctctgcagc
ccggggtatgaaggagtccactgtgagctagagacagacgagtgccaagcacaaccctgc
aggaatggaggctcctgccgggacctccccggggctttcatctgccagtgtcctgaaggg
ttcactggaggccactgtgaaacagaggtggacgcctgtgcctccagcccctgccagcac
ggaggccggtgtgaggacggtggcggggcctacctgtgtgtgtgtccagagggcttcttt
ggctaccactgcgagacagtgagtgacccctgcttctctagcccctgtgggggccgcggc
tactgcttggccagcaacgggtcccacagctgtacctgcaaagtgggctacacaggcaag
ggctgcaccaaagagctcctcccaccaacagctctcagggtagagagggtagaggagagc
ggggtctccatctcctggagcccacctgagggcaccgtggccagacagatgctagatggc
tatgcagtcacctacgcctcctcggacggctcctcccggcgcacagacttcgtggaccgg
agccgctcctctcaccagctgcgggccctagcagccggccgggcctacaacatctccgtt
ttctcagtcaaacgaaacaccaacaacaaaaacgatatcagcaggccggtggtactgccc
gtccgaacccgaccccgtgctattgaagacttcgatgtcaccaatgtttcagccaatgcc
atctcagtgcagtgggctcttcacaggatccagcatgttactgtcagcagggtccgagtg
tccatcctccaccctgaggcctctgtggcccagtccactgaggtggacagaagtgtggac
cgagtcacatttggggacctgctaccaggaagaagatacactgtgcagctaaccaccctc
agtgggcctggaggagctgactaccctactgagagcctggcctcagcaccactgaacgtg
tggacccggcctttgcctccagcaaacctgactgcctctcgggtcacagccacctctgcc
cacgtggtctgggacacccccacttcaggtatctccctggaggcttatgtcatcaatgtg
accaccagccagagcaccaagagccgctacatccccaatgggaagctggtgtcctacaca
gtgcgtgacctgctgccaggtcggcggtaccagctctcggttacggccgtgcagagcaca
gagcagggccagctgcacagtgagcctgcccacctctacatcatcacctcctccagggat
ggcactgacagacgttggcaccagggaggacaccccctacggatgctcagaaacaggcca
gcccctgtgcgcctgccagagctgcacctgctcaatgaccacagtgcccctgaaacacca
actcagccacccaggttctcggagcttgtagatggaagaggaagagtgagtgccaggttt
ggtggcttgcccagcaaatcggtcaccgtgagatcacaacccaccactctggcaccactc
aagaacacagaggaggcccctgagcaggtccgcctggccctccagctacccaagaacagc
agcaaggacacagagagtgctcctggtggctgttcagaaggtgcctgtcagaatggaggc
acctgtgtgccaggtgccaatgcccacagctgtgactgcaggcctgggttcaaaggaaga
cactgtgagcttgcctgtgaaaaagtgccccgcccctgcacacggctgttctctgagacg
aagtcgttccctgtctgggaaggagatgtctgccaccatgtgtataagaaagtctacaaa
gttcaccaggacatttgttttaaagagcgctgtgagagcacaagcctcaagnaaactcca
aacaggaaacaaagtgacagccagacactgaagaaatcttaa
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