Phodopus roborovskii (desert hamster): 127226699
Help
Entry
127226699 CDS
T08852
Symbol
Hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04371
Apelin signaling pathway
prob04613
Neutrophil extracellular trap formation
prob05034
Alcoholism
prob05203
Viral carcinogenesis
prob05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
127226699 (Hdac4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
127226699 (Hdac4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
127226699 (Hdac4)
05203 Viral carcinogenesis
127226699 (Hdac4)
09165 Substance dependence
05034 Alcoholism
127226699 (Hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127226699 (Hdac4)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127226699 (Hdac4)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
127226699 (Hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
127226699
NCBI-ProteinID:
XP_051046757
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPARVNHMSSTVDVATALPLQVAPAAVPMDLRLDHQFSLP
LEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAM
KHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLN
KKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFPL
RKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVATALKKRPLDVTDSACSSAPGSGPS
SPNSSSGNVSTENGITPTVPSAPAETSLAHRLVTRDGSVAPLPLYTSPSLPNITLGLPAT
GPAAGAAGQQDTERLALPALQQRISLFPGTHLTPYLSTSPLERDGGAAHNPLLQHMVLLE
QAPTQTPLVTGLGALPLHTQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQALQHLV
IQQQHQQFLEKHKQQFQQQQLHLSKMISKPSEPPRQPESHPEETEEELREHQALLDEPYL
DRLPGQKEPSLAGVQVKQEPIESEEEEVEPTREADPSQRPATEQELLFRQQALLLEQQRI
HQLRNYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLVYDTLM
LKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSEAHTLL
YGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGCVVELV
FKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIVDWDVH
HGNGTQQAFYNDPNVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPM
GDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLTKQLMG
LAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLQQRPNANAVHSMEKVMD
IHSKYWRCLQRLSSTVGHSLIEAQKCENEEAETVTAMASLSVGVNPAEKRSEEEPMEEEP
PL
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggccgagaccagccggtggagctgctg
aatcctgcccgtgtgaaccacatgtccagcactgtggacgtggctacagcgctgcctctg
caagtggcccctgcagcagtacccatggacctgcgcctggaccaccagttctcgctgccc
ttggaacccgctctgcgggaacagcagctgcagcaggagcttctagcactgaaacagaaa
cagcagatccagcggcagatcctcattgctgagttccagcggcagcatgagcagctgtcc
cggcagcacgaggcccagctgcatgaacatatcaagcagcagcaggagatgctggccatg
aagcaccagcaagagctgctggagcaccagcggaaactggagcggcaccggcaggagcag
gagctggagaagcagcaccgtgagcagaagctgcagcagctcaagaacaaggagaagggc
aaagagagtgccgtagcaagcaccgaggtgaagatgaagctgcaggagtttgttctcaac
aagaagaaggcgctggcccaccggaacctgaaccactgcatttccagcgatccccgctac
tggtatgggaagacacagcacagctcccttgaccagagctctccaccccagagtggggta
tcagcctcctacaaccacccagtcttgggaatgtacgatgccaaagatgacttccctctt
aggaaaacagcttctgagcccaacctgaaattacggtcaaggcttaagcagaaagtagct
gagagacggagcagccccctgttgcgcaggaaagatggccctgtggcaactgctctaaaa
aagcgacccctggatgtcacagactctgcgtgcagcagcgcccctggctccggtcccagc
tctcccaatagcagctctggcaacgtcagcactgaaaatggcatcacgcccaccgtgccc
agcgctccagctgagacgagcttggcacacagactcgtgactcgagacggctcagtcgcc
ccactccctctctacacatctccatccttacccaacatcaccttggggctccctgccacc
ggccctgctgctggtgcagcaggccagcaggatactgagaggcttgctctcccagccctc
cagcagcggatctccctgttccctggcacccacctcaccccgtacctgagcacctcgccc
ttggagcgggatggtggagcagctcacaacccccttctgcagcatatggtcctgctggag
caggcacccacccagacaccccttgtcacaggcctgggggcgctgcccctccacacacag
tccctggttggtgcggacagggtgtccccatccattcacaagctgcggcagcaccgcccc
ctggggcgcacgcagtcagcacccctgccgcagaatgcacaggccctgcagcacctggtg
atccagcagcagcaccagcagttcctggagaagcacaagcaacagttccagcagcaacag
ctgcacctcagcaagatgatctccaaacccagcgagccaccccggcagcctgagagccac
cctgaggagacggaggaggagctccgtgaacaccaggccttgttagatgagccctaccta
gaccggctccctgggcagaaggagccctctttagctggtgtgcaggtgaagcaggagccc
atagagagtgaggaggaagaggtggagcccactcgagaggcggaccccagccagcggcca
gcgactgagcaagagctgctcttcagacagcaagctctcctgttggagcagcagaggatc
caccagctaaggaactaccaggcatctatggaggctgctggcatccctgtgtcatttggc
agccacagacctctgtcccgggcacaatcctccccagcatctgccaccttccccatgtca
gtccaggagccccccaccaaaccaaggttcaccacaggccttgtgtatgatactctgatg
ttgaagcaccagtgcacctgtgggaacaccaacagccacccagagcatgctgggaggatc
cagagcatctggtcccggctgcaggagactggcctccgtggcaagtgtgagtgcatccgt
ggacgcaaggccacattggaagagctgcagacagtgcactcggaggcccacacactcctc
tacggcacaaaccctctcaacagacagaaactggacagtaagaaacttctaggctcgctg
acctccgtgtttgtcaggctgccttgtggtggtgttggggtggatagtgacaccatatgg
aatgaagtacactcttcaggggcagcccgcctggctgtgggctgcgtggtggagctggtc
ttcaaggtggccacaggagagctaaagaatggctttgctgtggttcgtcccccaggacat
catgccgaggagagcacacccatggggttctgctactttaactccgtggcagttgcagcc
aaacttcttcagcagagactgaatgtgagcaagattctcattgtggactgggatgtacac
catgggaatgggacccagcaggccttctacaatgaccccaatgttctctacatgtccctt
caccgctatgacgacggcaacttcttcccaggaagtggagcaccagatgaggtgggcaca
gggccaggcgtgggtttcaatgtcaacatggctttcacgggtggcctcgaaccccccatg
ggagatgcagagtacctggcagccttcagaacggtcgtcatgccaattgcaaatgagttt
gccccagatgtggtactggtgtcatcagggttcgatgctgtggagggccaccccacacct
cttggagggtacaatctctctgccaaatgctttgggtacttgacgaagcagctgatgggc
ctagctggtggccgaattgtgctggctcttgagggcggccatgacctgacggccatctgt
gacgcttctgaagcatgtgtttctgctctgctgggaaatgagcttgagcctctgccagaa
aaggttctgcagcagagacccaatgccaatgccgtccactccatggagaaagtgatggac
atccacagcaagtactggcgctgcctgcagcgtttgtcctccaccgtggggcactctctg
attgaggcccagaagtgtgagaatgaagaagctgagacagtcaccgccatggcctcactg
tctgtaggcgtaaaccctgctgagaagagatcggaggaagagcctatggaggaggagcca
ccactgtag
DBGET
integrated database retrieval system
