Phodopus roborovskii (desert hamster): 127226758
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Entry
127226758 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: interphotoreceptor matrix proteoglycan 2-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
prob00536
]
127226758
Glycosaminoglycan binding proteins [BR:
prob00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
127226758
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SEA
EGF
MscL
DUF5020
Motif
Other DBs
NCBI-GeneID:
127226758
NCBI-ProteinID:
XP_051046847
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
CARELIWEAFRTFWDRLPGREEYRYWMDSCEDGITSVFEMGTHFSQSNGALRSLILKVSC
YIKVQESHSCSDEACGPELSSPVPVGDTSTLAGDIPSASDPGXASESSVVSPEESISNEI
ETVTEEPTQPAVEQIAEFSIRLLGKQYTEELRDPSSAIYRLLVEEFISEVENAFADLPGY
KGIRILEFSLPEENRNGIDVHYAVTFNGEAIGNTTWDLISLHSNKVENHGLVEMDDKPTA
VYTISNFRDDIAETLRQNFLMGNSSLNLDPKSLQLINVKGVLLPQTEDIVWNARSSSLQV
TTSSALDNTLQTEWLSADEPTTTNISPLDFSSGPPSATGRELRTESALGDLGSTPKLASP
SEVVLSASPEVLEGSSLTLHSVTPAELQIGLPVASEGRTSGSSILEDGLVSIEEPEDASV
DVLPSSSLVQTVPKETVPPIEDSGMTLLTSSPHLTSSVIEDHATDVTAPSGLDSLASKVT
DQLDVSPWFPDTSEEKEFTFESGLGSGSGENVDLTTWLWSETSLDKTTETLSKSWSEDEY
RFLPTKTTEKLHIDGRVDSRGQITDSSEHRYSDRSLSFAEEESLGVSAIPIFVESVTQST
SLILSKHTSDIPDTDSYSVTKVPFLLEAIATSASTDTLRKEDMVQTESSGHKGLHSEKPD
MQPVWTILPESDVVWARTSSLGKLSRDTLASTPASTDSLWLKASVTQSTELSPTTSSTQL
EDEVIMGVQDISLELDRVGTDYYQTELAQEQNGKVGSYVEMSPNVHYTEMPIVAHPTKGG
DLSHTQTAGTLVVFFSLRVTNMMFSEDLFNKNSLEYKALEQRFLELLVPYLQSNLSGFRN
LEILNFRNGSIVVNSRVKFAEAVPPDVNNAMYLILEDFCTTAYQTMNLDIDKYSLDVESG
DDANPCKFQACNEFSECLVNPWSGEAKCKCYPGYLSVDELPCQSLCDLQPDFCLNDGKCD
IMPGHGAICRCRVGSNWWYRGQHCEEFVSEPFVIGITIASVVSLLLVASAVIFFLVKILQ
AQNIRRERQRPTSSSRQPDSLSSVENAVKYNPAFESHLAGCEQYEKPLSLHPLYGSASEE
VLGGLSREEIRQMYESSGLSKEEIQERMRILELYANDPEFAAFVREHQMIVSNSLIVSPD
QGLEKPATLSSYLTDMTYFLGFMDSFSIQASP
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
tgtgccagggagctcatctgggaagccttcaggacgttttgggaccgacttcctgggcgt
gaggaataccgttactggatggattcatgtgaagacggaatcacaagtgtgtttgaaatg
ggcacacattttagtcagtccaatggagcacttagaagcttaatcctgaaggtgagctgt
tacattaaagtccaagaatcccatagttgttcagatgaggcctgtgggcctgagttgtcc
tctccagttcctgttggtgatacctcaacattggcaggtgatattcccagtgcttcagat
ccagggntggcctcagagagcagtgtggtatcaccggaagagagtatcagtaatgaaatt
gagacagtgacagaggagcccacacagccagctgtggaacagatagctgaattcagcatc
cgacttctggggaagcaatatactgaagaactgcgggatccctctagcgccatctaccga
ctcctcgttgaagagttcatttcagaggttgaaaatgcgttcgctgatttaccaggatac
aagggcatccgcattcttgagttcagcctccctgaagaaaatcgtaatgggatagacgtt
cactatgcagtcaccttcaatggcgaggccatcggcaataccacctgggacctcataagc
cttcactccaataaggtggaaaaccatggccttgtagagatggatgacaaacccactgcc
gtctacacaatcagtaacttcagagatgatatcgccgagacactacgccagaactttttg
atgggaaattcctctttgaatctagaccccaagtctctccagcttatcaatgtgaaagga
gttttgctcccccaaacagaagacatagtttggaacgcccgaagttcaagtcttcaggtg
acaacatcctctgctctggacaatacccttcaaactgaatggctctcagcagatgaaccc
accaccaccaatatttcaccacttgatttcagctctggtcctccctcagccactggcagg
gagctccggacagaaagtgctttgggtgatttagggtctacacctaaattagcctctccc
tcggaggtggtcctcagcgcttccccggaggttttagagggtagcagcttgactcttcat
tctgttaccccagcagagcttcagattggcttgcctgtggcttctgagggaaggacttct
ggatcttccatattagaagatggattagtcagtattgaagaaccagaagatgcttctgtg
gatgtgttgccttcaagctcattagtacaaactgtgccaaaagaaacagtaccacccatc
gaagactctggtatgactctcttgacatcctcaccacatctgacctcttctgtcatagaa
gaccatgctacagacgtaactgcaccttctggcttggactccttggcttccaaagtcaca
gaccagttggatgtgagcccatggtttccagacacctctgaagaaaaagagttcactttt
gaaagtggtttgggttctggctctggggaaaacgttgatctgactacttggctatggagt
gagacttcattagacaagaccactgaaacactgtcaaagtcatggtctgaagatgagtat
agattcttgccaactaagactacagaaaaattacatatagatggcagagtagattccaga
ggacaaataactgactcttcagaacatagatacagtgatagatccttaagttttgcagag
gaagaatcccttggagtgtctgctatacccatctttgtagaatctgtaactcagtcgaca
tctctaattctttccaagcatacgtcagacataccagacactgattcctactcagttacc
aaagtgccctttttactggaagctatagcaacttctgcttccactgataccctgcgaaag
gaagacatggtgcaaacagagtcatccggtcacaaagggcttcacagtgagaagccagat
atgcagcctgtgtggaccatattgccagaatcagatgtagtttgggcaagaacttcttcc
ttggggaaattgtccagggacacattggcaagtacaccagcgagcactgacagcctctgg
ttgaaagcttccgtgacacagtccactgaattgtctccaacaaccagctccacccagcta
gaagatgaagtaataatgggcgtacaggatatttcattagaactagatcgggtaggcaca
gattactatcagactgagctagcacaagaacaaaatggcaaggttggtagttatgtggaa
atgtctccaaatgttcactacacagagatgcctattgtggcccatcccacaaaaggaggt
gacttgagtcacacccagaccgcaggaacattggtggttttctttagcctccgagtgaca
aacatgatgttttcagaagacttgtttaataaaaactctttggaatataaagccctggaa
caaaggttcttagaattgctggttccctatcttcagtcgaatctgtcagggttccggaac
ttggaaatcctgaacttcagaaatggcagcattgtggtgaacagccgagtgaagtttgcc
gaggctgtccctccagatgtcaacaatgccatgtatctgattctggaagacttttgtact
actgcctaccaaaccatgaacttggatattgataagtactccttggacgtggaatcaggt
gatgatgccaacccttgcaagtttcaggcctgtaatgaattttccgagtgtttggtaaat
ccgtggagtggagaagcaaagtgcaaatgctacccggggtacctgagtgtggatgaactg
ccttgtcaaagtctttgtgatctacagcctgacttctgcttgaatgatggaaagtgtgac
attatgcccgggcatggggccatttgtagatgccgggttggttcgaactggtggtatcga
ggccaacattgtgaggagtttgtgtctgagccctttgtcataggcatcaccatagcctct
gtggttagccttctccttgtcgcatctgctgtcatcttcttccttgtgaagatacttcaa
gctcagaatatcaggagagaaagacagaggcccaccagctccagcaggcagcccgacagc
ctgtcatctgtagaaaatgctgtcaagtacaaccctgcattcgagagccacttggctgga
tgtgaacagtatgagaagcccctgagcctgcacccactctatggctctgctagtgaggag
gtgcttggtggcctgagcagagaagaaatcagacagatgtatgagagcagcggcctttcc
aaagaggaaattcaagagcgaatgaggattttggagctgtatgctaatgatcctgagttt
gcagcttttgtgagagaacatcaaatgatagtgagtaatagcttgattgtaagccccgat
caaggcctggaaaagcccgccactctgagctcatacctcaccgatatgacctactttctg
ggctttatggactcattttccatccaagctagtccttga
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