Phodopus roborovskii (desert hamster): 127226984
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Entry
127226984 CDS
T08852
Symbol
Vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127226984 (Vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127226984 (Vps8)
Membrane trafficking [BR:
prob04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127226984 (Vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
Beta-prop_WDR36-Utp21_1st
TPR_VPS8_2
zf-RING_Vps41
WD40_CDC20-Fz
Clathrin
TPR_Vps41
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-C3H2C3
Beta-prop_WDR3_1st
WDR55
zf-RING_5
zf-C3HC4
Beta-prop_WDR5
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
127226984
NCBI-ProteinID:
XP_051047145
LinkDB
All DBs
Position
Unknown
AA seq
1425 aa
AA seq
DB search
MESEPEQENLEHNLCARTTEEELNKSFSLEASLSKFSCIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGSQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSISDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVN
NCVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDSVE
KLHVIDRQTQEELETMEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRGWRERMDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDVSKRK
AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDTVPVIVDYCLLLQRKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQVVLMCWENRLYDAMIYVYNKGMNEFISPMEKLFKVIAPSLNAGKTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSVEASSEEEVYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYERAHQYDKIIDCYLHDPLREEDVFNYIHNILSIPGHSAEEKQSVWQKAM
DHMEELVSLKPCKAAELVATHFSGQIEVVIGQLQNQVLLFKFLRSLLDPREGVHVNQELL
RIPPSVTEQFIELLCQFSPDQVIETLQVLECYRLEETIQITQKYQLHQVTAYLLEKKGDV
HGAFLLLLERLQSRLQEITRQGGNSKEALPLKGVEDAMVETIALCQRNSQSLNQQQREAL
WFPLLEAMMAPQKLSNSAAPPLHSEALKSLTMQVLNSMAAFIVLPSILQRILQDPIYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVSRGLNPKQDYCSICL
QQYKRHQEMADEIIVFSCGHLYHSFCLQSKECTLDTEGQTRWTCYKCSSSNKAGKLSENP
SENKKGQLASSQVKMSPSYQSKGDSPARKANSDSALDPQQIQAFDQLCRLYRGSSRLALL
TELSQNRSGDSCRPFAGSQSGPAFNSIFQNENFQLQLTPPPVAED
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgaaccagagcaggagaatttggaacacaacctgtgtgccaggactactgag
gaagagttgaacaagtcttttagtctagaagcttctctctcaaaattctcttgtatagat
ctggataaggagctggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagtggatacccctccaactctggaaagcatacttaatgagaccgatgatgaagatgag
tcctttgttcttgaggaccctacgttgctaaacatcgacaccattgattctcactcttat
gacacctcatctgtggcgagctcagacagcggcgacaggaccaacttaaagaggaagaag
aagctgcctgactccttctcactgcatgggtcggttatgcggcattcacttctgaagggg
atatctgcgcagatcgtgtccgcggccgacaaagtagatgccggcttgcccacagcaatt
gcagtgtccagtctgatagcagtgggcacctctcatggattggctttaatatttgatcag
aatcaagctctgcggctctgccttggcagcacgagtgtcggaagtcagtatggagccatc
tctgccctcagcatcaacaatgactgctcaagacttctctgtggctttgctaaaggacag
atcaccatgtgggatttggccagcgggaaacttctcaggtcaatatcagatgctcatcct
ccagggacagccatcttgcacatcaagtttacagacgacccaactcttgcaatctgcaac
gacagcggaggctctgtttttgaactaacatttaagagagtgatgggagtgaggacctgt
gagtccaggtgtctgttcagcggctccaagggtgaagtctgctgcattgagcccctgcat
tctaagcctgagttgaaggatcaccccatcacgcagttttcactattggccatggcgtct
ttaactaagatactggtcattgggttgaaaccatccctgaaagtgtggatgacttttccc
tatggacggatggatccatccagcgttccattgctggcctggcactttgtggcagtgaat
aactgtgtgaatcccatgcttgctttctgcagaggagatgtggttcattttcttttggtc
aaaagggatgagtcaggcgcaattcacgttaccaagcaaaagcatcttcacctgtactac
gatctgatcaactttacctggataaactcacgcacaattgtgcttttagacagcgtggag
aagctgcacgtgattgacaggcagacacaggaggaactagagacaatggagatctcagaa
gtccagctggtctataacagcagccacttcaagtcactggccactggagggaacgttagc
caggcgctggctttggttggagagaaggcttgctatcaatccatcagtagctatggtggt
cagatcttctatctggggacaaagtctgtttacgtgatgatgctgaggggctggagggag
agaatggatcatctcctgaaacaggattgtcttacagaagccttggctcttgcgtggtct
tttcatgagggaaaggcaaaagcagtcgtgggactgtcgggggatgtcagtaagaggaag
gctgtcgttgccgatcggatggtagagattctgttccattacgcggatcgggctctgaaa
aaatgcccagaccagggaaaaatccaagtgatggagcagcactttcaggatacggtgcct
gtcatagtggactattgcctcctgcttcagcgaaaggatcttttgtttagccagatgtat
gacaaattaagtgaaaactcagtggcaaaaggagtgtttttggagtgcctcgagccatat
attttaagtgacaaattggtgggaattacaccccaggttatgaaagacttgattgttcat
ttccaagacaaaaaactaatggaaaatgtggaagccctcattgtacacatggacatcacc
agcctagatattcagcaggtggttctcatgtgttgggaaaatcgtctgtatgatgccatg
atctatgtctataacaagggcatgaatgagttcattagccccatggagaaactgttcaaa
gtcattgccccttctctgaatgcaggaaaaactcttacagatgagcaagttgttatgggc
aacaagctcctggtatacatcagctgttgcctggcaggtcgtgcctatcccctgggtgac
atccctgaagatcttgttcccttggttaaaaaccaggtgtttgagtttctgattcgtctg
cattctgtagaagcatcctctgaggaggaagtctatccttatgttcggactttgctacat
ttcgacacaagagaatttctgaatgtgttggcactgacctttgaagattttaaaaatgac
aagcaagcagtggaataccaacagcgcattgtggacattttactgaaagttatggtggag
aattcagattttaccccatcacaagtggggtgtctctttacattccttgctcggcagctt
gccaagcctgacaataccttgtttgtgaacagaactctcttcgatcaagtccttgagttc
ctctgtagccctgacgatgactcccgccactctgaaaggcagcaggtccttttagaattg
ctgcaggctggaggtatagttcagtttgaagaaagtcggctcatccgcatggcagaaaag
gctgaattctatcaaatctgtgaatttatgtatgagcgagcacaccagtatgacaaaatc
attgactgctacctgcatgacccattgagggaggaagatgtcttcaattatatccacaac
atcttatctattcctggccatagtgctgaggagaagcagtctgtgtggcagaaagccatg
gatcatatggaggaacttgtgtcgctgaagccctgtaaggctgcggagctggtcgcaact
cacttctctggacagattgaagtagtcattggtcagcttcaaaaccaggttttgcttttc
aaatttttgaggagtcttcttgacccaagggagggtgttcatgtcaaccaggaattgctt
cggattccaccatctgttacagagcagttcatcgagctgctgtgtcagttcagtccggac
caagtcatagagacactgcaagtccttgagtgctaccgtttggaggaaaccattcagatt
acacagaagtatcagctccatcaagtcactgcgtatctattggagaaaaaaggggatgtt
cacggcgccttcctcctgctgctggagagactgcagagcagactgcaagagataacacgg
cagggtggaaacagcaaggaggctttgccactgaagggtgttgaagatgccatggtagag
acgattgccctttgccagaggaattctcagagtttgaatcagcagcaacgagaggcgctt
tggtttccattgttggaggcaatgatggcaccacagaagctgtccaactcagctgcccct
cctctgcacagtgaagctctgaagtctttgactatgcaagttctgaacagcatggcagca
ttcattgtcctcccgtcgatcttacaaaggatcctgcaggacccaatttatgggaaagga
aaacttggagaaatccagggccttattctggggatgttggacacctttaactatgagcaa
accttactggaaacaaccaccagccttctgaaccaagacctccactggtcactgtgtaac
ctgagggcttcagtctccaggggactcaaccccaaacaggactactgttctatatgttta
cagcagtacaaaagacaccaagaaatggctgatgaaatcattgtctttagctgtggccac
ttgtatcattcattctgcctacaaagcaaggaatgcaccttagatactgagggccaaaca
agatggacgtgttacaagtgcagctcaagcaacaaagcgggcaagctcagtgaaaaccct
tctgaaaacaagaaaggacagttggcctcttcacaggtaaaaatgtcgccatcttatcag
tccaaaggggactctcctgccaggaaggcaaactcagactctgctctggacccacagcaa
atccaagcctttgaccagctctgtcggctctaccgcggaagttcccggctggctctcctt
acggaactgtcccagaaccgcagtggtgacagctgtaggccatttgcgggttcccagagt
ggccctgctttcaacagcatcttccagaatgagaacttccagctgcagctcacacctcca
cctgtggctgaagactga
DBGET
integrated database retrieval system
