Phodopus roborovskii (desert hamster): 127227004
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Entry
127227004 CDS
T08852
Symbol
Rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03030
DNA replication
prob03410
Base excision repair
prob03420
Nucleotide excision repair
prob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127227004 (Rfc4)
03410 Base excision repair
127227004 (Rfc4)
03420 Nucleotide excision repair
127227004 (Rfc4)
03430 Mismatch repair
127227004 (Rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prob03032
]
127227004 (Rfc4)
03036 Chromosome and associated proteins [BR:
prob03036
]
127227004 (Rfc4)
03400 DNA repair and recombination proteins [BR:
prob03400
]
127227004 (Rfc4)
DNA replication proteins [BR:
prob03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127227004 (Rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
127227004 (Rfc4)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127227004 (Rfc4)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127227004 (Rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
127227004 (Rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
DUF815
AAA_16
AAA_assoc_2
AAA_30
AAA_22
AAA_11
AAA_24
Mg_chelatase
RuvB_N
AAA_28
SLFN-g3_helicase
AAA_19
AAA_5
KH_DUF2096_C
ResIII
Viral_helicase1
AAA_7
Motif
Other DBs
NCBI-GeneID:
127227004
NCBI-ProteinID:
XP_051047177
UniProt:
A0AAU9ZJ48
LinkDB
All DBs
Position
Unknown
AA seq
364 aa
AA seq
DB search
MQAFLKGTSVSTKPQFTKDRVIPATAGTSGETKKVKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEKENVKISHEGIAYLVKISEGDLRK
AITFLQSATRLTGGKEVMGDVITDIAGVIPPTTIDGILTACQSGSFDKLEAAVKDLIDEG
HAAVQLVNQVHDKVVEDEELSDKQKSIITEKLAEVDKCLADGADEHLQLMSLCATVMQQL
TQNC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttctaaaaggcacatctgtcagtactaaaccacaattcaccaaggatcgg
gtaatacccgccactgctggaaccagtggggaaaccaagaaagtcaagccagtgccttgg
gtggaaaaatatcgtccaaagtgtgtggatgaagttgctttccaggaagaagtggttgca
gtacttaaaaaatctttagaaggagctgatcttcctaatctcttattctatggaccacct
ggaactggcaaaacatccacaattttggcagcagctagagaactctttgggcccgaactc
tttcgattaagggttcttgagctaaatgcatctgatgaacgtggaatacaagtagtccga
gagaaagtgaaaaattttgctcagttaactgtgtcaggaagtcggtcagatgggaagcca
tgtccaccctttaagattgtaattctggatgaagcagattctatgacttcagctgctcag
gcagctttaagacgtaccatggaaaaagagtctaaaacaaccagattctgcctcatctgc
aactatgtcagtcgaataattgaacccctcacttctagatgttcaaagttccgtttcaag
cctctgtcagataaaattcagcaggagcgattactggatattgctgagaaggaaaatgtc
aaaattagccatgagggaatagcttatcttgttaaaatatcagaaggagatctacggaaa
gccattacatttcttcaaagtgctactcgactaacaggtggaaaggaagtcatgggggat
gtgatcacagacattgctggggtaataccacccacaaccattgatggaatactaactgca
tgtcaaagtggctcctttgacaaactagaagctgcagtaaaggacctaatagatgaagga
catgcagctgttcagcttgttaatcaagttcatgataaggtggtagaagatgaagaactt
tctgataaacagaagtctattattacagaaaaacttgctgaagtggataaatgtttagca
gatggtgcagatgaacacctgcaattgatgagcctctgtgcaactgtgatgcagcagcta
actcagaattgttga
DBGET
integrated database retrieval system
