Phodopus roborovskii (desert hamster): 127227496
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Entry
127227496 CDS
T08852
Symbol
Synj1
Name
(RefSeq) synaptojanin-1 isoform X1
KO
K20279
synaptojanin [EC:
3.1.3.36
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00562
Inositol phosphate metabolism
prob01100
Metabolic pathways
prob04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
127227496 (Synj1)
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
127227496 (Synj1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127227496 (Synj1)
Enzymes [BR:
prob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.36 phosphoinositide 5-phosphatase
127227496 (Synj1)
Membrane trafficking [BR:
prob04131
]
Endocytosis
Clathrin-mediated endocytosis
Inositol 5-phosphatases
127227496 (Synj1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos2
Syja_N
DUF1866
Exo_endo_phos
RRM_1
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
127227496
NCBI-ProteinID:
XP_051047800
LinkDB
All DBs
Position
Unknown
AA seq
1566 aa
AA seq
DB search
MAFSKGFRIYHKLDPPPFSLIVETRHKEECLMFESGAVAVLSSAEKEAIKGAYTKVLDAY
GLLGVLRLNLGDTMLHYLVLVTGCMSVGKIQESEVFRVTSTEFISLRVDASDEDRISEVR
KVLNSGNFYFAWSASGVSLDLSLNAHRSMQEHSTDNRFFWNQSLHLHLKHYGVNCDDWLL
RLMCGGVEIRTIYAAHKQAKACLISRLSCERAGTRFNVRGTNDDGHVANFVETEQVIYLD
DCVSSFIQIRGSVPLFWEQPGLQVGSHRVRMSRGYEANAPAFDRHFRTLKDLYGKQIVVN
LLGSKEGEHMLSKAFQSHLKASEHASDTLMVSFDYHQMVKGGKAERLHSVLKPQVQKFLD
YGFFYFDGSEVQRCQSGTVRTNCLDCLDRTNSVQAFLGLEMLTKQLEALGLAEKPQLVTR
FQEVFRSMWSVNGDSISKIYAGTGALEGKAKAGKLKDGARSVTRTIQNNFFDSSKQEAID
VLLLGNTLNSDLADKARALLTTGSLRVSEQTLQSASSKVLKNMCENFYKYSKPKKIRVCV
GTWNVNGGKQFRSIAFKNQTLTDWLLDAPKLAGIQEFQDKRSKPTDIFAIGFEEMVELNA
GNIVNASTTNQKLWAVELQKTLSRDNKYVLLASEQLVGVCLFVFIRPQHAPFIRDVAVDT
VKTGMGGAAGNKGAVAIRMLVHTTSLCFVCSHFAAGQSQVKERNEDFVEIARKLSFPMGR
MLFSHDYVFWCGDFNYRIDLPNEEVKELIRQQNWDSLIAGDQLINQKNAGQIFRGFLEGK
VTFAPTYKYDLFSEDYDTSEKCRTPAWTDRVLWRRRKWPFDRSAEDLDLLNASFQDESKI
LYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVEAEERQKVYKEVIAAQGPPDGTVL
VSIKSSAQENTFFDDALIDELLQHFAHFGEVILIRFVEDKMWVTFLEGSSALNVLSLNGK
ELLNRTITITLKSPDWIKNLEEEMSLQKIGATLPSSTSSTLLGEDAEVAADFDMEGDVDD
YSAEVEELLPQHLQPSSSSGLGTSPSSSPRTSPCQSPTVPEYCAPSLPVRPSRAPSRAPG
PPGSQGSPVDSQPAPQKDSSQTLEPKRPPPPRPGAPPARPAPPQRPPPPSGARSPAPARK
EFGGVGAPPSPGVARREMEAPKSPGTTRKDTIGRNQPSPQAGLAGPGPAGYAAARPTIPA
RAGVISAPQSQARASAGRLTPEAQSKPPETSKGPAVLPEPLKPQTAFPLQPPLPPPAQKM
QEPLVPMVAPMPPSGAQPNLETPPQPPPRSRSSHSLPADSSPQLQVKTNGVSGVKQEPAL
KSDPFEALSLSLLAVSKAQLSAQMSPVLTPDPKIQLPSASQSSVNSLSSVSCMPAMSPVP
ARSKSQGSMGSSANPVPSLPSRNPFTDMTAAPGNPFRVQSQESEVTSWLSKEEPAPDSPF
PPLMPLSRGTSKPSTSLDGFEDNFDLQSQPTAKTSNPKGWVTFEEDDNFPTAGKSKSVCS
DTLGNAPASFDDDWNKGTSVSFCVLPARRPPPPPVPLLPPSTSSSSAGPSTTLASKASPT
LDFTER
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcagcaaagggttccgcatctaccacaaactggatcccccacccttcagcctc
atagtggaaactcggcataaggaagaatgtctcatgttcgagtctggggctgtggctgtg
ctctcatctgcagaaaaggaagcaattaaaggtgcatataccaaagtactggatgcatat
ggacttttgggagttttacgattaaatcttggtgataccatgttgcattatctggtccta
gtcacgggatgcatgtctgttgggaaaatccaagaatctgaagttttccgagttacttcc
actgagtttatatcactccgagttgatgcttctgatgaggaccgcatttcagaagtccga
aaggttctgaactcgggaaacttctactttgcatggtctgcctctggggtcagcttagat
ctgagtctgaatgctcatcgcagcatgcaggagcactcaaccgacaacagattcttctgg
aatcagtctttgcatttgcatctcaagcactacggtgtgaattgtgatgactggctatta
cgcctcatgtgtggaggagtagaaatcaggacaatttatgctgcccataagcaagcaaaa
gcctgcctcatctcaagactgagctgtgaacgagctgggacaaggtttaatgtccgaggg
acaaatgacgatggccacgttgccaattttgtagaaacagagcaggttatatacttagat
gactgtgtttcttccttcatacaaatccgtggatctgtcccgttgttctgggagcaacca
gggttgcaggtgggatcccatcgtgtccgtatgtcgaggggatatgaagcgaatgcacct
gcttttgacaggcatttccggacacttaaggatttgtatggtaaacaaatagtagtaaac
ttacttggatctaaggaaggagaacatatgctaagtaaggctttccagagtcatttgaaa
gcttctgagcacgcgtccgataccctcatggtgtcttttgactatcaccaaatggttaaa
ggagggaaggcagagagactacacagtgttctcaaacctcaagtccagaagtttctagat
tatggatttttttatttcgatggcagtgaagttcaaaggtgccagagtggtacagttcga
acgaactgcttggattgtcttgatagaacaaacagcgtgcaggcattccttggattagag
atgctaactaaacagctggaagctctgggcttggctgaaaagcctcagctggtgactcgc
tttcaagaagttttccggtccatgtggtctgtgaatggcgactccatcagtaagatatac
gccggcaccggagccttggaagggaaggccaaggctgggaagttaaaagatggtgctcgc
tctgtcaccagaaccattcagaacaacttcttcgacagctccaagcaagaagccattgat
gtcctgctcctgggaaacactctcaacagtgacctagctgacaaagcccgggcgctccta
accactgggagtttgcgtgtttctgaacagacattacagtcagcatcttccaaagtctta
aagaacatgtgtgagaacttctacaaatactcaaaacccaagaagattcgagtgtgtgtt
ggaacctggaatgtgaatggtgggaagcagttccgcagcatcgcgtttaagaaccagacg
ctcacggactggcttctggatgctcccaagttagctggcatccaggagttccaagataag
agaagtaaaccaaccgatatatttgcaattggctttgaagaaatggtggagttgaatgct
gggaacattgtgaatgcaagcacaactaaccagaagctgtgggcagtggagctgcagaag
acgctctccagagacaacaagtatgtgctgctggcatccgagcagctggtgggcgtctgc
ctgtttgtctttatcagaccgcagcatgccccttttatcagggacgttgcggtcgacacc
gtgaagactgggatgggaggcgcggctggaaataagggggccgtcgcgattcggatgctc
gtgcacaccaccagcctgtgctttgtctgcagccactttgccgcagggcagtcacaagtg
aaagagagaaatgaagacttcgtagaaatagcacggaagttgagttttcccatgggaagg
atgctgttttcccatgactatgtgttttggtgtggtgatttcaactatcgaattgatctt
cctaatgaagaagttaaagagctcataagacagcaaaattgggattctcttatagcgggg
gatcaactcatcaatcagaaaaatgcagggcagatttttagaggatttttagagggaaaa
gtgacatttgctccaacctataaatatgacttgttttctgaagactatgacaccagtgag
aagtgccgcacccctgcgtggacagaccgggtcctctggaggaggaggaagtggccgttt
gacagatcagctgaagatttggatcttctgaatgctagtttccaagatgaaagcaaaatc
ctttacacatggaccccgggcactttgctgcactatgggagagccgagctgaagacttct
gaccataggcctgtcgttgccctgattgatatagatatatttgaagttgaagctgaagag
agacaaaaagtttataaagaagtcattgcagcccagggcccaccagatggcacagtactg
gtgtcgatcaaaagctctgcacaagaaaatactttctttgacgatgctttgattgacgag
ctcctgcagcacttcgcacactttggtgaagtcatactcatcagattcgtagaagataaa
atgtgggttacatttttggagggcagctctgccttgaatgttctgagcctaaatgggaaa
gagttattaaatcggactataacaattactttaaaaagcccagactggatcaagaatttg
gaagaagagatgagtttacagaaaatcggtgccacgttgccttcgtcaacaagctccacc
ctgcttggggaggatgcagaggttgcagcggatttcgacatggaaggtgacgtcgatgac
tatagtgctgaagtagaggagcttcttcctcagcatctacagccatcgtccagttctggc
cttggcacttccccaagttcctcaccccggaccagtccctgccagtctcctacagtgcca
gagtactgcgcaccgtctcttcccgtcagaccaagccgcgcaccatcgagagctccaggc
cctccgggttcacagggttccccggttgacagtcagccagcaccccagaaggactcttcc
cagaccttagagcccaagaggccaccgcctccccgcccaggcgctcctccagcacgtcct
gccccgccgcagagaccgcctccaccttcaggggctaggagtcctgcacctgctagaaaa
gaatttggaggtgttggagcccctcccagtcctggggtagctaggagagagatggaagca
cccaaaagcccgggaacaacacggaaagatactatagggcgtaatcagccttcacctcaa
gcaggacttgcaggcccaggacctgctggatatgccgctgccagaccgactattccagca
cgggctggagtgatcagtgctcctcagagccaggcccgggcatctgccggaaggctaact
cctgaagctcagagcaagcccccagagacatcgaaaggtccagctgtccttccagagcca
ctgaagcctcagactgcgtttcctctgcagcctccactgcctccacctgctcaaaaaatg
caggagcctctggtccccatggtggcacccatgcctccttctggcgcccagccgaatctg
gaaaccccaccacagcccccacctcggagtaggtcctctcacagcttgcctgcagactcc
tcgcctcagctgcaagtaaaaacaaatggagtttctggtgtcaagcaagagccagcgttg
aagagtgacccatttgaagctctctcccttagtctgcttgctgtatcaaaggctcagctg
tctgctcagatgtcacctgttctaaccccagacccaaagattcagttgccttctgcatcg
caaagtagtgttaactctttgagttctgtaagctgcatgccagccatgtctccagttcca
gcacggagcaagtcacaggggagtatggggagctctgcgaacccggtccccagcctgccc
agcaggaaccctttcacagacatgactgctgcccctggaaatccattccgagttcagtct
caagagtcggaggtaacttcttggctctccaaggaagagcctgctcctgacagccctttc
ccccctctcatgcctctcagtcggggcaccagcaagccgtcaacttcacttgatggtttt
gaggacaattttgacctgcagagccagcctacagcaaaaacaagcaaccccaaaggatgg
gtaacctttgaggaagatgacaactttcctacagcagggaagtcaaagtcagtttgttca
gacacactgggtaacgcaccagcttcatttgatgatgactggaataaaggtacaagtgtt
tctttctgtgtgttgccagccagaagaccaccacctcctcctgtccctctgctcccgccc
agcacgagctcatcctctgcaggaccttccacaaccctggcgtctaaggcgtctcccaca
ctggacttcacagaaagatag
DBGET
integrated database retrieval system
