Phodopus roborovskii (desert hamster): 127227998
Help
Entry
127227998 CDS
T08852
Symbol
Trpc4ap
Name
(RefSeq) short transient receptor potential channel 4-associated protein isoform X1
KO
K11796
Trpc4-associated protein
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
prob01009
]
127227998 (Trpc4ap)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127227998 (Trpc4ap)
Protein phosphatases and associated proteins [BR:
prob01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127227998 (Trpc4ap)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
127227998 (Trpc4ap)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3689
Carm_PH
Motif
Other DBs
NCBI-GeneID:
127227998
NCBI-ProteinID:
XP_051048368
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MAAVPAAAGAGASRGRQSAATAAAWGGWGGRPRPGNILLQLRQGQLTGRGLVRAVQFTET
FLTERDKLSKWSGIPQLLLKLHAASHLHSDFIECQNILKEISPLLSMEAMAFVTEDRKLT
QEATYPNTYIFDLFGGVDLLVEILMRPTISIRGQKLKISDEMSKDCLSILYNTCVCTEGV
TKRLAEKNDFVIFLFTLMTSKKTFLQTATLIEDILGVKKEMIRLDEVPNLSSLVSNFDQQ
QLANFCRILAVTISEMDTGNDDKHTLLAKNAQQKKSLSLGPSAAEINQAALLTIPGFVER
LCKLATRKVSESTGTASFLQELEEWYTWLDNALVLDALMRVASEESEHNQASTMFPPLGT
SEENALPHTSARTQLPQSMKIMHEIMYKLEVLYVLCVLLMGRQRNQVHRMIAEFKLIPGL
NNLFDKLIWRKHSASALVLHGHNQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQE
LNELSAISLKANIPEVEAVLNTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVE
SFLRGTTSYADQMFLLKRGLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRF
NKYINTDAKFQVFLKQINSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYIS
QVPTQMSFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKK
YPGFLLNNFHNLLRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALV
SYIEEPYMDIDRDFTEE
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgcctgcagcggctggagctggggccagccgggggagacagtcggcagct
acagcggcggcatggggcggatggggaggccggccccggccgggtaacatcctgctgcag
ctgcggcagggccagctcaccggtcggggcctggttcgggcggtgcagttcactgagacc
tttttgaccgagagggacaaattgtccaaatggagtgggattcctcagttgctccttaag
ctgcatgctgccagccacctccacagtgacttcattgagtgccaaaacatcctaaaggag
atttcccctcttctctccatggaggccatggcatttgttactgaagacaggaaacttact
caagaagctacgtatccaaacacatatatttttgatttgtttggaggtgttgatcttctt
gtagaaattcttatgaggcctacaatctctatccggggacagaaactaaaaataagtgac
gagatgtcaaaggactgcttgagcatcctgtataatacctgtgtctgtacggaaggtgta
acaaagcgtttggcagagaagaatgattttgtgatcttcctgtttacactgatgacaagt
aagaagacattcttacaaacagcaacactcatcgaagatattttgggtgttaaaaaggaa
atgattcggctagatgaagttcctaatctgagttccttagtatccaatttcgatcagcag
cagcttgctaacttctgccggattctggctgtcaccatttcagagatggacacagggaat
gacgacaaacatacacttcttgccaaaaatgctcagcagaagaagagcttgagcttgggt
ccttctgcagctgaaattaaccaagctgctcttcttaccatccctggattcgtggaacgg
ctttgcaaactggcaactagaaaagtgtcagagtcaacgggcacagccagcttccttcag
gaactggaggagtggtacacgtggctagacaatgcgctggtgctagatgccctgatgcga
gtggccagtgaggagtctgaacacaatcaagcctccactatgttccctcctctaggcact
tcagaggagaatgcactgccacatacctcagccaggactcagctgccccagtcaatgaag
attatgcatgaaatcatgtacaaactggaagtgctctatgtcctctgtgtgctgctgatg
ggacgtcagcgaaaccaggtccacaggatgattgccgagttcaagttgatcccaggactc
aataatttgtttgacaaactgatttggaggaagcattcagcatctgcccttgtcctccat
ggtcacaaccagaactgtgactgtagcccggacattaccttgaagatccaatttttgagg
cttctgcagagtttcagtgaccaccatgagaacaagtacctgctgctcaacaatcaggag
ctaaatgaactcagtgccatctctctgaaagccaacatccctgaggtggaagctgtcctc
aacactgacaggagtttggtgtgtgatggcaagaggggcttactaactcggctgctgcag
gtcatgaagaaggagccagcggaatcttccttcaggttttggcaagcccgggctgtggaa
agtttcctccgagggaccacctcctatgcagaccagatgttcctgctgaagcgaggcctt
ctggagcacatcttatactgcattgtggacagcgagtgcaagtccagggatgtgctccag
agttactttgaccttctgggagagctgatgaagttcaatgtcgatgcattcaagagattc
aataaatatatcaacactgatgcaaagttccaggtgttcctgaagcagatcaacagctcg
ctggtggactccaacatgctggtacgctgtgttactttgtcactggaccgatttgaaaac
caggtggacatgaaagtggctgaggtcctgtccgaatgccgcctgcttgcctacatatcc
caggtgcccactcagatgtccttcctcttccgcctcatcaatatcatccacgtgcagacg
ctaacccaggagaacgtcagctgcctcaacaccagcctagtgatcctgatgctggcccgg
cggaaagagcggctgcccctctatctgcggctgctacagcgaatggagcacagcaagaaa
taccctggcttcctgcttaacaacttccacaacctgctgcgcttttggcagcagcattac
ctgcacaaggacaaggacagcacctgcctggagaatagctcctgcatcagcttctcatac
tggaaggagacagtgtccatcttgttgaacccagaccgtcagtcgccttctgccctggtc
agctacattgaggagccctacatggacatagacagagacttcactgaggagtga
DBGET
integrated database retrieval system
