Phodopus roborovskii (desert hamster): 127228004
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Entry
127228004 CDS
T08852
Symbol
Nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob05014
Amyotrophic lateral sclerosis
prob05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127228004 (Nup98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127228004 (Nup98)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127228004 (Nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127228004 (Nup98)
03036 Chromosome and associated proteins [BR:
prob03036
]
127228004 (Nup98)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127228004 (Nup98)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127228004 (Nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127228004
NCBI-ProteinID:
XP_051048382
UniProt:
A0AAU9ZJE7
LinkDB
All DBs
Position
Unknown
AA seq
1816 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTAGLFGSSPATSSATGL
FSSSTTNSAFSYGQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFGQATTTPNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTTSGGLFGNKPTLTLGTNTNTSNFGFGTNNSGTSIF
GSKPAPGTLGTGLGTGFGTALGAGQASLFGNSQPKIGGPLGTGAFGAPGFNTTTAILGFG
APQAPVALTDPNASAAQQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAA
QKALTTPTHYKLTPRPATRVRPKALQTTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKL
VLKNLNNSNLFSPVNHDSEDLASPSEYPENGERFSFLSKPVDENHQQDGDDDSLVSRFYT
NPIAKPIPQTPESAGNKNNSSSSVDDTIVALNMRAALRNGLEGSSEETSFHDESLQDDRE
ETENNAYHIHPAGIVLTKVGYYTIPSMDDLAKITNDKGECIVSDFTIGRKGYGSIYFEGD
VNLTNLNLDDIVHIRRKEVIVYVDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSP
DRLADINYEGRLEAVSRKQGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEEHPPKTT
SKKLKTTPLPPAGQAATFQMTLNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLD
SVLEECVPEDQEPVSASTHIASSLGINPHVLQIMKASLLIDEEDGDAMDQHFSHFPSKGD
IVQEICSPRLPISASHSSKSRSIVGGLLQSKFVSGAFLSPNASVQECRTPRTSSLMNVPS
TSPWSVPLPLATVFTVPSPAPEVQLKTVGIRRQPGLVPLEKSVTYGKGKLLMDMALFMGR
SFRVGWGPNWTIANSGEQLHGSHELENHQVADSMEYGFLPNPVAVKSLSESPFKVHLEKL
SLRQRKLDEDLQLYQTPLELKLKHSTVHVDELCPLIVPNPGVSVIHDYANWVKESPRDLL
EVEIMKHWSLTWTLCEALWGHLKELDSQLDEPTEYIQVLERRRAFSRWLSRTAAPLIEEE
VSLTRRDSPIEAVFSYLTGNRISEACSLAQQSGDHRLALLLSQLVGSQSVRELLTMQLAD
WHQLQADSFIQDERLRIFALLAGKPVWQLSEQKQINVCSQLDWKRALAVHLWYLLPPTAS
ISRALSMYEEAFQNTSEGDKYACSPLPSYVEGLGYVVEEEKDPRRPLQDVCFHLLKLYSD
RHYDLNQLVEPRSITADPLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESEGL
WEWAIFVFLHIENSSIREKAVRELLTRHCQLSETPESWAKETFLMQKLCVPAEWIHEAKA
VRAHMESNKHLEALYLFKAGHWNRCHKLVIRHLASDAIINENYDYLKGFLEDLAPPELSS
LIQDWETSGLVYLDYIRVIEMLHRIQQVDCSGYELEHLHTKVTSLCNRIEQIPCYNAKDR
LAQSDMAKRVANLLRVVLSLQHAPDAASNSTPDPQQVPLRLLAPHIGRLPMPEDYALEEL
RGLTQSYLRELTVGSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcatttggaaccccctttgggggtggcacagggggctttggcacaact
tcaacatttggacaaaatactggctttggtactactagtggaggagcatttggaacatct
gcttttggttctagcaacaatactggaggcttatttggaaattcacagaccaaaccagga
ggattatttggtaccaattcatttagccagccagcaacctccacaagcactggctttggg
tttggtacatcaacaggaacgtcaaacagtttgtttggaactgcaagtacagggaccagt
cttttctcatcccagaacaatgcatttgcacaaaataaaccaactggctttgggaatttt
ggaacaagtactagcagtggagggctctttggaactacaaacaccacctctaatcctttt
ggtagcacatctggctccctatttgggccaagtagttttacagcagcacctacaggaact
accattaaatttaatcctcccactggtacggatactatggtcaaagctggagttagcact
aacattagtaccaagcatcagtgtattactgctatgaaagaatatgaaagcaagtcttta
gaggaacttcgtttggaggattatcaggctaaccgtaaaggcccacagaaccaagtggga
gcaggtaccacagctggcttatttgggtcttctccagcaacttccagtgcgacaggactc
ttcagctcctccaccactaattcagccttttcatatggtcagaacaaaactgcctttgga
actagtacaactggatttggaacaaatccaggtggtctcttcggccaacagaatcaacag
actaccagtctcttcagcaaaccatttggccaggccacaaccaccccaaatactggcttt
tcctttggtaatactagtacgcttggacagccgagcacaaacactatgggcttatttgga
gtaacccaagcctcacagccaggtggtctttttggcacagctacaaacaccagcactggg
acagcatttggaacaggaacaggtctctttgggcagcccaatactggatttggtgcagtt
ggttcgaccctgtttggcaataacaagcttacaacttttggaaccagcacaaccagtgct
ccttcatttggtacaaccagtggcgggctcttcggtaacaaaccaaccctgactttagga
accaatacaaacacttccaattttggttttggcacaaataacagtggtactagtattttt
ggaagtaagccagcaccagggactctgggaactggacttggtacaggatttggaacagct
ctgggtgctggacaggcatctttgtttggaaacagccaacctaagattggagggcctctt
ggtacaggagcctttggggcccctggatttaatactacgacagccattttgggctttggc
gccccccaggccccagtagctttaacagatccaaatgcttctgctgctcagcaggctgtt
ctccagcagcacctcaatagtctgacatactcaccctttggagactcccctctcttccgg
aatcctatgtcagatcctaagaagaaagaagagagactgaaaccaacgaatccagcagct
cagaaggctcttactacacctactcattataaacttacacctcgccctgccaccagagtc
aggccgaaggctttgcaaacaactggtacagccaaatcacatctctttgatggactagat
gatgatgaaccatccttagccaatggagcattcatgcccaaaaagagcatcaagaagttg
gttttgaaaaaccttaacaatagcaatctcttttctcctgttaatcatgattcagaagat
ctagcatcaccatctgagtatccagaaaatggagagagatttagcttcctgagcaagcct
gttgatgagaaccatcagcaggatggagatgatgactctcttgtatcacgtttttacact
aaccctatagccaaacccattcctcaaacccccgagagtgctggaaacaaaaataatagc
agcagcagtgtggacgacaccattgttgctttgaacatgcgtgctgctttgcgcaatgga
cttgaaggaagtagtgaagaaacgtctttccatgacgagtcgttgcaagatgaccgagag
gaaacagaaaataatgcttaccacatacatccagcaggcattgttctcacaaaagttggt
tactatactattccatcaatggatgaccttgctaaaattaccaatgataaaggagagtgc
attgtttcagacttcactattggtcgtaaagggtatggctcaatctactttgaaggagat
gtgaatttgacaaatctaaatttggatgatattgtgcatatccgaaggaaagaagttatt
gtctatgtagatgataaccagaagccacctgtgggtgaagggctaaatagaaaggctgaa
gttaccttggatggagtttggccaacagataaaacatcccggtgtttaataaagagccca
gatcgacttgctgatatcaactatgaaggaagattggaagcggtctcaaggaagcaggga
gcccaattcaaggagtaccgtcctgaaactggatcttgggtgtttaaggtctcccatttt
tctaaatatggccttcaggattctgatgaagaggaagaggaacacccacccaaaactact
tcaaagaagttgaagactacccctttgccccctgcaggccaggcagccactttccagatg
actcttaatggcaaacctgcacctccacctcagagccagagtcccgaagtggagcagtta
gggagggttgtggaactggacagtgacatggtagatatcacccaggagccagttttggat
tctgtgttagaagagtgtgttcctgaggatcaggagcctgtgtctgcttcgacacacatt
gcatcttcactgggaattaatccacatgtcttacagatcatgaaagcatcattgctcatt
gacgaggaagatggggatgccatggatcaacacttcagtcactttccctccaaaggagat
attgttcaagaaatctgttctcctagactccccatttcagcctcccactcatcaaaatcc
cgctcaatagttggtgggttgctgcaatcaaaatttgtcagtggagcttttctttcacca
aatgcctcagtgcaagaatgccgcactcccagaacatcatctctaatgaatgtcccatcc
acatccccctggtctgtccctctgccactggccactgtgttcacagtgcctagcccagct
cctgaagttcagctgaaaacagtggggatacgcaggcaaccagggctagttcctcttgaa
aaatctgttacatatggcaaggggaaactcctgatggacatggccctattcatgggacgg
tcatttcgagttggttggggccccaactggactattgctaacagtggagaacaactacat
ggctcccatgaactggaaaatcatcaggttgccgattctatggaatatggattcctgccc
aatcctgtagctgttaaatctctgtctgaatccccattcaaagttcatttggaaaaactg
agtttgagacaaaggaagctggatgaagatctgcagttataccagacacctctggagctc
aagttaaaacatagcactgtccatgtagacgagctgtgtcctctcattgtccccaatcct
ggagtttcagtcattcatgattatgcaaattgggttaaggaatcacccagagatttactg
gaagtagaaattatgaagcactggagcctgacgtggacattatgtgaggccctgtggggc
cacctgaaggagcttgacagccagctggatgagcccacggaatacatccaggttctggag
cgaagaagagctttttcccgctggctgtcccgtactgctgcacccctgattgaagaggaa
gtttccttaacccgaagagacagtcccatagaagctgtcttcagctacctcacaggcaac
aggattagtgaggcctgttctctggcacagcagtcaggtgatcatcgccttgctcttctt
ttgtctcagttggtggggagccagtcagtccgagaactgctcactatgcagttggctgac
tggcatcagctccaggctgacagctttatccaggatgagagattgcgcatatttgcccta
ctagctggaaaaccggtgtggcagctctcagaacagaagcaaattaatgtatgctcccag
ctggattggaaacgtgcacttgctgtccatctttggtatttgcttccaccaacagcatcc
atttccagggctctcagcatgtatgaagaagcatttcagaatacttctgagggtgataaa
tatgcctgctcccctcttccttcatatgtggaaggtttgggctatgtggtagaagaagaa
aaagacccacggagaccacttcaggatgtttgcttccaccttctaaaactctatagtgac
agacattacgatctcaatcagctggtggaacctcgaagcataactgcagaccctttggac
taccgactaagctggcacctttgggaagtgcttcgggctcttaactatacccatctctcc
gaacaatgtgagggtgtactgcaggccagttatgctggccaacttgaaagtgaaggactc
tgggagtgggccatttttgtcttcctgcacattgagaactcaagcattcgtgagaaggct
gttcgagagctgcttactcgacactgccagctgtcagagacccctgagtcctgggcaaag
gagactttccttatgcagaagctttgtgtgcctgctgagtggattcatgaggccaaagca
gttcgagcacacatggaatccaataagcacttggaggccctctatttatttaaagccggc
cactggaaccgctgtcacaaacttgtcatccggcacctcgcttctgatgccataattaat
gagaactatgactacctgaaagggttcttagaagatctggcacctccagaactcagcagc
ctaattcaggactgggaaacatctgggcttgtttacctggattatattcgagtaattgaa
atgctccaccgtattcaacaggtggattgctcaggttatgaactagagcacttacacacc
aaagtgacctcattgtgcaaccggatagagcagattccatgttacaatgccaaggaccgc
ctggctcagtcagatatggccaagcgtgtagccaacttgcttcgggtagtgctgagcctg
cagcatgctcctgatgccgcctccaactcaacaccagaccctcaacaagtccctttgcgt
ctcttggctccccacattggcaggctccctatgcctgaggattatgccttggaggaactc
cgtggcctcacacagtcctacctgcgagaactgactgttgggagtcagtga
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integrated database retrieval system
