Phodopus roborovskii (desert hamster): 127228010
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Entry
127228010 CDS
T08852
Symbol
Xndc1n
Name
(RefSeq) protein XNDC1N
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127228010 (Xndc1n)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127228010 (Xndc1n)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Motif
Other DBs
NCBI-GeneID:
127228010
NCBI-ProteinID:
XP_051048399
LinkDB
All DBs
Position
Unknown
AA seq
1260 aa
AA seq
DB search
MAPVKISHVVSFSSQDPKYPVENLLNPDSHRGPWLSCPQDKSGQLKVELQLERVVPISYI
DVGNCGCAFLQIDVGRSSWPLDRPFVTLLPATMLMSLADSKEGKNRSGVRMFKDDDFLTP
ASGESWDRLRLTCSQPFTRHQSFGLSFLRVRSSLDHLADPVMDLSAPGGSGLNQNSSDTL
ESDPRPWLANPSIRRTFFPGPQTSTKEISELKSMLKQLQPGPLGRAARMVLSAAHKAPPA
SAVSPKNSHGEPGPSHPKSAEPRAEEQNRKNDVGRRKRRKLQEQRPLLNSSSQPNRRGTA
RARKRQHQPQTKNDNSVQATGQCPICTGSFSIETLPLHAATCGESSPPLPASPSSSSSSQ
SVLRWHYVSNCPLPSFTQPQPNWTEIVNKKLKFPPTLLGAIQEGQLGLVQQLLESGSDTS
GGGSGGPLRNVEESEDRSWREALNLAIRLGHEAITDVLLANIKFDFRQIHEALLVAVDTN
QPAVVRCLLARLEREKGRKVDTKSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQL
LMDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAA
FQLSRELRRLARKEPEFKPQYIALESLCQDYGFELLGMCRNQSEVTAVLNDLGEDSETES
EGLGQAFEEGIPNLARLRLAVNFNQKQFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFV
AFLIFLTMPFLCIGYWLAPKSRLGHLLKIPVLKFLLHSASYLWFLIFLLGESLVMETQLS
TFKGRSQSVWETSLHMVWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLASFAL
RLLLAGLAYMHCQEASDSTTCHYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYIL
PAHESLGTLQISIGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETEKLGNFNETFQF
LFWTMFGMEEHKVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDDA
DVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAVFYLVRRIFWFICCCSSCCKAKKSDY
PPIPTFTNPGARAGPGEGEHGSYRLRVIKALVQRYIETARREFEETRRKDLGTRLTELTK
TVSRLQSEVASVQKTLAAGGTPRPPDGASILSRYITRVRNSFQNLGPPTPETPAELTMPG
IVETEVSLEAGLDDVGETETPASGEPSHSSPAHVLVHREQEADGAEDLPLDECLETKGKS
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtgaagatcagccatgtggtatcattttcctctcaggatcccaagtatcct
gtggagaacttgctgaacccagacagtcataggggaccttggctcagctgtcctcaggac
aagagtgggcagctgaaagtggagcttcagctggagagggtggtccccatcagttatatc
gatgtcggtaactgtggctgtgctttcctgcagattgatgtgggtcgctcttcctggccc
ctggacagaccttttgtcacccttctccctgcaaccatgctaatgtccctcgctgactca
aaagaggggaagaaccgctcaggggtccggatgtttaaagatgatgatttcctgactcca
gcctcaggagaatcatgggatcgacttagactgacctgctcccaacctttcacacgccat
cagtcctttggcctgtccttcctgcgggtgcgttcctctctggaccacttggctgaccct
gtgatggatctctctgcccctgggggctctgggctaaaccagaactcttctgatacactg
gagtctgatcctaggccttggctggctaatccttctatccggaggacattcttcccaggt
ccccagacgagcaccaaggaaatttcagagctcaaaagtatgctgaagcagttgcaacca
ggacctctggggcgggcagcccgcatggtgctctctgctgcccataaggcacctccagcc
agtgcggtaagcccaaagaacagccatggggaaccaggtcccagtcatccaaagagtgca
gagcccagagcagaagaacaaaacaggaagaatgatgtgggcagaaggaagagaaggaaa
ttgcaggagcaaagaccattgttgaactcaagttctcagccaaataggagggggacagca
agagcaaggaaaagacaacaccaacctcagaccaaaaatgacaatagtgtccaggctact
ggacagtgtcccatttgtacaggctccttcagcatcgagacacttcctttgcatgctgcc
acttgtggagagagctccccaccgcttccagcttctccctcttcctcatcttcctcgcag
tctgtgctgagatggcattatgtgagcaactgtcctcttccctccttcactcagccacag
cccaactggactgagattgtgaacaaaaagctcaagttcccacccacactcctgggtgcc
atccaggagggccagctgggtctcgtgcagcagctgctggagtcaggctccgatacctca
ggaggtgggtcaggtggacctctgcggaatgtggaagagtctgaggaccgctcctggagg
gaagccctcaatctggccatccgcctgggccatgaggccatcactgatgtgctgctggcc
aacattaagtttgacttccggcagatacatgaagctttgctagtggcagtggacacaaac
cagccagcagtggtgcgttgcctactagctcggctggaacgggagaagggtcggaaagta
gacaccaagtctttctctctagccttctttgactcatcaatcgatggctcccgctttgcc
cctggtgtcactccactcacactagcctgccagaaggacctgtatgagattgcccagttg
ctcatggaccagggccacactattgcacggccccacccagtttcctgtgcctgccttgag
tgtagcaatgcccgccgatacgacctgcttaagttctcattatcccgaatcaacacctac
cgtggcattgcaagccgggctcacctctcactggccagcgaggatgccatgctggctgcc
tttcagcttagccgggagctcaggcgcctggcacgaaaggagcctgaatttaagcctcag
tacattgccctggagtcactctgccaagactatggctttgaactgttgggcatgtgccgg
aatcagagtgaggtcaccgctgtgctcaatgacctgggtgaggatagtgagactgagtct
gagggcctgggccaggcctttgaggagggtatccccaacctggcaagattgcggttggct
gtcaacttcaaccagaaacagtttgtagcacaccccatctgccagcaagttctgtcttcc
atctggtgtgggaacctggctggctggcgtggaagcaccaccatctggaaactcttcgtg
gcctttctcatcttcctcaccatgcccttcctctgcattggctactggctggcacccaag
tccaggctgggtcacctgctgaagatcccagtgttgaagtttctgctgcactctgcctcc
tatctgtggttccttatcttcttgctgggagagtccctggtcatggagactcagctgagt
accttcaaaggccgcagccagagtgtctgggagacctcgctacacatggtttgggtcacg
ggcttcctgtggttcgagtgtaaggaggtatggatcgagggcttgcgcagctatctcctg
gactggtggaacttcctggatgtggtcatcctgtccctgtacttggcgtcatttgcactg
cgcctccttctggctgggcttgcctacatgcactgccaggaagcctcagacagtaccacc
tgccattatttcaccacggctgagcgaagtgagtggcgcacagaggacccccagttcttg
gccgaggtgctctttgctgtcaccagcatgctgagcttcacccgacttgcatatattctg
ccagctcacgagtctctgggcactctgcagatttccattggcaggatgatcgacgacatg
atccggttcatgttcatcctcatgatcatcctgactgccttcctctgcggcctcaacaac
atctacgtgccatatcaggagacggagaagctgggcaacttcaacgagacattccagttt
ctattctggaccatgttcggcatggaagaacacaaagtggtggacatgcctcaattcctg
gtgcctgagttcgtgggccgggccctgtatggcatctttaccatcgtcatggtcatcgtg
ctgctcaacatgctcattgccatgatcaccaactccttccagaaaattgaggatgatgct
gatgtggagtggaagtttgctcgctctaagctctacctgtcctacttccgagagggtttg
acactgcctgtgcccttcaacatcctgccctccccaaaggctgtcttctaccttgtcagg
agaattttctggttcatttgctgttgctcctcctgctgcaaagctaagaagtcagactac
ccccccatcccaacctttaccaaccctggggcaagggcagggcctggggaaggagaacat
gggtcttaccgccttcgtgttatcaaggctctggtacagcgctacatagagactgctcgg
cgcgagtttgaggagacccgcaggaaagacctgggcaccagactgacagagctgaccaag
actgtgtctcgactgcaaagcgaggtggccagtgtgcagaagactctggcagcaggtggg
acaccacggcctcccgatggtgccagcatcctcagtcgctacatcacccgagtgcgcaac
agcttccagaatctgggcccccccacccctgagaccccagctgagctgaccatgccgggg
attgtggagaccgaggtctctttagaagctggccttgatgatgtaggggagactgagact
ccagcgtctggagaacccagccactcctcccctgctcatgtgctggtgcacagggagcaa
gaagcagatggggcagaggacctgcccctggacgaatgtctggagaccaagggcaaatcc
taa
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