Phodopus roborovskii (desert hamster): 127228166
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Entry
127228166 CDS
T08852
Name
(RefSeq) high mobility group protein B1
KO
K10802
high mobility group protein B1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03410
Base excision repair
prob04140
Autophagy - animal
prob04217
Necroptosis
prob04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127228166
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127228166
09143 Cell growth and death
04217 Necroptosis
127228166
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
127228166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127228166
03400 DNA repair and recombination proteins [BR:
prob03400
]
127228166
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prob04147
]
127228166
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
127228166
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
127228166
MMR (mismatch excision repair)
Other MMR factors
127228166
Exosome [BR:
prob04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127228166
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
127228166
NCBI-ProteinID:
XP_051048598
LinkDB
All DBs
Position
Unknown
AA seq
212 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNSEFSKKCSERWKTMSAKEKGKFE
DMAKADKARYEREMKTYIPPKGETKKKFKDPNVPKRPPSAFLFCSEYRPKIKGEHPGLSI
GNVAKKLGEMWNNTAADDKPPYEKKAAKLKEKYGKDIAAYRAKGKPDAAKKGVVKAEKSK
KKKEEEDDEEDEEDEEEEEEEEDEDEEDDDDE
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaaaaagccaagaggcaaaatgtcctcatatgcattctttgtg
caaacttgccgggaggaacacaagaagaagcatccggatgcttctgtcaactcagagttt
tccaagaaatgctcagaaaggtggaagactatgtctgctaaagaaaaggggaaatttgaa
gacatggcaaaggcggacaaggctcgttatgaaagagaaatgaaaacctacatccccccc
aaaggggagacaaaaaaaaagttcaaggaccccaatgtacccaagaggcctccttcggcc
ttcttgttctgttctgagtatcgcccaaaaatcaaaggagaacacccaggcttgtccatt
ggtaatgttgcaaagaaactaggagagatgtggaacaacactgctgcagatgacaagccg
ccctatgaaaagaaggctgccaagctgaaggagaagtatggaaaggatattgctgcttac
agagctaaagggaaacccgatgcagcgaaaaagggggtggtcaaggcagaaaagagcaag
aaaaagaaggaagaggaagatgatgaggaggatgaagaggatgaggaagaggaggaagaa
gaggaagacgaagatgaagaagatgatgatgatgaataa
DBGET
integrated database retrieval system
