Phodopus roborovskii (desert hamster): 127228201
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Entry
127228201 CDS
T08852
Symbol
Ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127228201 (Ctr9)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
127228201 (Ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_19
TPR_2
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
TPR_Slam
ARM_TT21_5th
ARM_TT21_4th
TPR_9
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
127228201
NCBI-ProteinID:
XP_051048648
UniProt:
A0AAU9ZK52
LinkDB
All DBs
Position
Unknown
AA seq
1171 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQSD
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVV
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGETEATKE
KKRGGGGGRRSKKGGEFDEFVNDDTDDDLPVSKKKKRRKGSGSEQEGEEEDGGERKKKRR
RRPAKGEEGSDDDETENGPKPKKRRPPRAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADEGHPRNSNSDSDDDERPNRRASSESESDDNHNKSGSEAGSPPRSGRQESD
EDSDSDQPSRKRRRSGSEQSDNESVQSGRSPSGGSENDSRPASPSAESDRESEQGSDNEG
SGQGSGNESEPEGSNNEASDRGSEHGSDDSD
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagattcccctccgggatactgacgaggtcattgaacttgac
ttcgatcagttaccagagggagatgaagttatcagtattctgaagcaggagcacacacag
ctgcacatatggattgctctggcgctggagtactacaaacaagggaaaacagaagagttt
gtaaagttgctggaagcagcacggatagatggcaatttagactatcgagaccacgagaaa
gaccagatgacttgcttggatacattggcagcctactatgtgcaacaggctcggaaagaa
aagaacaaagataataagaaggaccttattacacaggcaaccttattgtatacaatggct
gataaaattattatgtatgatcagaaccatttgttgggaagagcctgcttctgcctgctg
gaaggtgacaaaatggatcaagctgatgcacagtttcattttgtacttaaccagtctcca
aacaatattccagcccttcttgggaaagcatgcatttcatttaacaagaaggattataga
ggagctcttgcttactataaaaaagcattgcgtactaacccaggatgtccagctgaagtt
cgtttaggaatgggccattgctttgtcaaacttaacaaactggagaaagctcgtctagca
ttcagcagagccctggaactcaactctaagtgtgtgggagcactggttggactggctgtt
ctagaactcaacaataaagaggctgactccatcaaaaacggtgtgcagcttctctccagg
gcctatactattgaccccagcaaccctatggtactgaaccacttggcaaaccactttttc
ttcaagaaggattatagtaaagtgcagcacctggctctccatgcattccacaacacagag
gtggaggctatgcaagcagaaagctgttaccagctggctcgatcattccacgttcaggaa
gattatgaccaagcctttcaatactactatcaagccacacagtttgcttcatcctccttt
gtactaccattttttggtttgggccagatgtatatttatcgaggtgacaaagagaatgca
tctcagtgcttcgagaaagttttgaaagcttatcccaacaattacgaaacgatgaaaatt
cttggctccctctatgctgcctcggaagatcaggagaaacgagacatagccaagggccat
ttgaagaaggtcacagaacagtatcctgatgatgtggaagcttggattgaattggcccag
atcttagaacagactgacatacagggagccctttcagcctatggaacagccacccgcatc
ctgcaggagaaggtgcaggctgacgtccctcctgagattctgaataacgttggggcccta
cattttagacttggtaacctaggtgaagcaaagaaatacttcctggcatcactggaccgt
gcaaaggcagaagccgagcatgatgaacactattacaacgccatctcagttaccacatct
tacaatttagctaggctctacgaggccatgtgtgaattccatgaagcagagaaactgtac
aaaaatattttacgagagcatcctaactatgttgactgctatctgcgcctaggagccatg
gccagagataaaggaaacttctatgaagcttcagattggtttaaagaagcccttcagatc
aatcaggatcacccagatgcctggtctttgattggtaacctccatctggcaaaacaagaa
tggggcccaggccagaagaagtttgaaagaatattaaaacagccatccacacagagtgac
acttactctatgctggcccttggcaatgtgtggctccagactttgcaccagccaacccga
gaccgagaaaaggaaaaacgtcatcaagaccgtgccctggccatctacaaacaagtcctc
agaaatgatgccaagaacctgtatgctgccaatggcataggagcagttttggcccacaaa
ggatacttccgtgaagctcgtgatgtgtttgcccaagtgagagaagcaacagcagatatc
agtgatgtgtggttgaacttagcacacatctacgtggagcagaagcagtacatcagtgct
gttcagatgtatgagaactgcctcagaaagttctataagcaccagaacactgaagttgtg
ctctacctggcccgggccctcttcaagtgtggcaagttgcaggaatgcaagcaaactctg
ctgaaggccagacacgtggcacccagtgatacagttttgatgtttaacgtggccttggtc
ttgcaaagattagctacctctgtcctgaaagatgaaaaaagtaatctgaaggaagtcctt
aatgctgtgaaagagctggagctggcccacagatacttcagttacctgagtaaagtagga
gataaaatgagattcgatttggcccttgctgcctctgaagcaaggcagtgctccgactta
ctgagccaggcccagtaccatgtggcccgggcacgcaagcaggatgaggaagaaagggag
ctgcgggccaagcaggagcaggagaaggagctcttaagacagaagcttctcaaagagcag
gaagagaaacgtctgagagaaaaggaagagcaaaagaaacttttggagcagcgggcccag
tatgtggagaagaccaaaaatatcctcatgttcactggagaaacggaagcaacaaaggag
aagaaaagaggaggaggtggagggcggcgttctaagaaaggaggagagtttgacgagttt
gtcaatgatgacaccgatgatgacctccctgtatccaaaaagaagaagagaaggaagggc
agtggcagtgaacaggaaggcgaagaggaggacggtggagagaggaagaagaagaggcgg
agaagacctgcaaagggagaagaagggtcagatgatgatgaaacagaaaatggccccaaa
ccaaagaagcgccgtccaccaagagcagagaagaagaaggctcccaagccagaacgcctg
cctccttcaatgaaggggaaaataaaatccaaagccattatatcatcaagtgacgattct
tcagatgaggataaactgaaaattgctgatgaaggccatcccaggaatagcaacagcgat
tccgatgatgatgaacggcccaatagacgggcctcctctgagagtgaatcggatgacaac
cacaacaagtctggcagcgaggcaggcagccctccgaggtcaggaagacaggagtcggat
gaggattccgacagtgaccagccatccagaaagagaaggcgctcgggctctgagcagtca
gacaatgagtctgtgcagtctgggagaagtccctccggaggttcagaaaatgattctcgc
ccggcttctccaagtgcagagtcagaccgtgaatcggagcaggggtccgacaacgagggt
tctggccaaggctctggaaatgaatcagaaccagagggctcaaacaatgaggcctcagac
cgaggctcagaacatggatcagatgatagtgactag
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integrated database retrieval system
