Phodopus roborovskii (desert hamster): 127228210
Help
Entry
127228210 CDS
T08852
Symbol
Bmal1
Name
(RefSeq) basic helix-loop-helix ARNT-like protein 1 isoform X1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04710
Circadian rhythm
prob04728
Dopaminergic synapse
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09150 Organismal Systems
09156 Nervous system
04728 Dopaminergic synapse
127228210 (Bmal1)
09159 Environmental adaptation
04710 Circadian rhythm
127228210 (Bmal1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127228210 (Bmal1)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127228210 (Bmal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
127228210
NCBI-ProteinID:
XP_051048664
LinkDB
All DBs
Position
Unknown
AA seq
626 aa
AA seq
DB search
MADQRMDISSTISDFMSPGPTDLLSSSLGTSGVDCNRKRKGSATDYQESMDTDKDDPHGR
LEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGATNPYTEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKIL
NYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGPSRLC
SGARRSFFCRMKCNRPSVKVEDKDFTSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDE
DNEPDNEGCNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAI
LAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRW
FSFMNPWTKEVEYIVSTNTVVLANVLEGGDPTFPQLTASPHSMDSMLPSGEGGPKRTHPT
VPGIPGGTRAGAGKIGRMIAEEIMEIHRIRGSSPSSCGSSPLNITSTPPPDASSPGGKKI
LNGGTPDIPSTGLLPGQAQETPGYPYSDSSSILGENPHIGIDMIDNDQGSSSPSNDEAAM
AVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccagagaatggacatctcctcaacaatcagtgacttcatgtccccaggcccc
accgaccttctctccagttccctgggcaccagtggtgtggactgcaaccgcaagaggaaa
ggcagtgccaccgactaccaagaaagtatggacacagacaaagatgatcctcatggaagg
ttagaatatgcagagcaccaaggaaggatcaagaatgcaagggaggcccacagtcagatt
gaaaagaggcgtcgggacaaaatgaacagtttcattgatgaattggcttctttggtacca
acatgcaatgcgatgtccaggaagttagataagctcaccgtgctaaggatggctgttcag
cacatgaaaacattgagaggtgccacgaacccatacacagaagcaaactacaagccaaca
tttctatccgatgatgaactgaaacacctaattctcagggcagcagatggatttttgttt
gtcgtaggatgtgacagagggaagatccttttcgtctctgagtctgtcttcaagattctc
aattatagccagaatgaccttattggccagagtttgtttgactacctacatcctaaagat
attgccaaagtcaaggaacagctatcttcctcagacaccgcaccccgggaacgactcatt
gacgcaaagactggacttccggttaaaacagatataacccctgggccatcccgactgtgc
tctggagctcgccgctctttcttctgtaggatgaaatgcaacaggccttcagtaaaggtg
gaagataaggacttcacctctacctgctcaaagaaaaaagcagatcgaaaaagcttctgc
accatccacagcacaggctatctgaaaagctggccacccacaaagatggggctggatgaa
gacaacgagccagacaacgagggctgtaatctcagctgcctcgtcgcaattgggcggctg
cattcacatgtggttccacaaccagtgaacggggaaataagggtcaaatctatggagtat
gtttctcgacacgccatagatgggaaatttgtttttgtagaccagagggcaacagctatt
ttggcatatctaccacaggaacttctaggcacatcatgttatgagtattttcatcaagat
gacataggacatcttgcagaatgtcacagacaagttttacagacaagagaaaagatcaca
actaattgttataagtttaagatcaaagacggttcctttatcacactacgaagtcgatgg
ttcagtttcatgaacccgtggaccaaggaagtagaatacattgtctcaaccaacactgtc
gttttagccaatgtcctggaaggcggggacccaaccttcccacagcttacagcatccccc
catagtatggacagcatgctgccctctggagaaggtggcccaaagaggactcatcccact
gttccaggcattccagggggaaccagagctggggcaggaaaaataggtcgaatgattgca
gaagaaatcatggaaatccacaggataagagggtcatcaccttccagctgtggctccagc
ccactgaacatcacaagtacgcctccccctgatgcctcctctccaggaggcaagaagatt
ctaaatggagggactccagacattccttccactggcctactaccagggcaggctcaagag
accccaggttatccatattctgatagttcttctattcttggtgagaacccccacataggc
atcgatatgatagacaacgaccaaggatccagtagtcccagtaatgacgaggcagcgatg
gctgtcatcatgagcctcttggaagcagatgcgggcctgggtggacccgttgactttagc
gacttgccatggccgctgtag
DBGET
integrated database retrieval system
