Phodopus roborovskii (desert hamster): 127228215
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Entry
127228215 CDS
T08852
Symbol
Copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127228215 (Copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prob04147
]
127228215 (Copb1)
Membrane trafficking [BR:
prob04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
127228215 (Copb1)
Exosome [BR:
prob04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
127228215 (Copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT
HEAT_2
Cnd1
HEAT_EZ
Arm
MMS19_N
CRAL_TRIO_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
127228215
NCBI-ProteinID:
XP_051048677
UniProt:
A0AAU9ZLQ6
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDNLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEVTVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGDFFVAASLATTLTKIALRYVALVQEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKLSQKKESEK
RNVTVQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEAADPLSSKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPVHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSL
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggcagcagagaacgtgtgctatacgttaattaacgtgccaatggattcagaaccc
ccttctgaaatcagcttaaaaaatgatctggagaaaggtgatgtgaaatccaaaactgaa
gctttgaagaaagtaattattatgattctgaatggagagaagctccctggactcctgatg
actatcatccgttttgtgctgccgcttcaggatcataccatcaaaaagttgcttctcgtg
ttctgggagattgttcctaaaacaactccagatgggagacttttacatgaaatgattctt
gtgtgtgatgcctatagaaaagatcttcagcatcctaatgagtttattcgaggatcgact
cttcgtttcctttgcaaattgaaggaagcagaattgctagaacctttaatgcctgctatc
cgtgcttgtttagaacatcgtcacagctatgtcaggagaaacgctgtattagcaatctac
actatctacagaaattttgaacatcttatacctgatgctcctgagctgatacatgatttt
ctggtaaatgaaaaggatgcaagctgcaaaagaaatgcatttatgatgctaattcatgca
gatcaggatcgagctttggattatttaagtacatgtattgatcaagttcagacatttgga
gacattctacagttggttattgttgaactaatatataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgctgtatctataacttactgcaatcatctagtcctgctgta
aaatatgaagctgctggaacattggtaacactgtccagtgcaccaaccgcaataaaggct
gctgctcagtgttatattgatttaattattaaggagagtgataacaatgtaaagctcata
gttctggaccgattggtagaattaaaagaacatcctgctcatgaacgagtcctccaggat
ctggtcatggacatcctaagagtactgagtacaccagacttagaagtgcgtaagaaaact
ctgcaattagcactggatcttgtctcttctaggaatgttgaagagttggttattgtcttg
aaaaaggaagtaattaaaacaaataatgtgtctgagcatgaagacactgacaaataccga
caactccttgtgcgaacactgcattcctgctctgtccgatttccagacatggctgcaaat
gttattcctgtgctaatggagtttctcagtgacagtaatgaagcagcagctgctgatgtc
ttggagtttgttcgtgaagccattcagcgctttgacaacctgagaatgctcattgttgag
aagatgcttgaagtcttccatgctattaaatctgtcaagatttatcgaggagcattgtgg
atcctgggagaatactgtagtacaaaggaagacattcagagtgtgatgactgaggtccgc
aggtcccttggggagattccaattgttgagtcagaaataaagaaagaagctggtgagtta
aaacctgaagaggaagtaactgttgggccagttcagaaattggttacagagatgggtacc
tatgcaacccagagtgccctcagcagttctagacctaccaagaaagaagaagacagacca
cccctgagagggttccttctggatggagatttctttgttgctgcctcccttgccacaact
ctgaccaagattgcattacgctatgtagcgttggttcaggagaagaaaaagcaaaactct
tttgttgctgaggctatgttgctcatggcaactatccttcatttgggaaaatcctctctt
cctaagaagccaattactgatgatgatgtagaccgaatttccctgtgcctcaaggtctta
tctgaatgctcacctttaatgaatgacatttttaataaggaatgcaggcagtctctttcc
caaatgttatctgccaaactcgaagaagagaaactatcccaaaagaaagaatctgaaaag
aggaatgtaacagtacaacctgatgaccccatttccttcatgcaactaactgctaagaat
gaaatgaactgcaaggaagatcagtttcagctgagtttgttggcagcaatgggtaataca
cagaggaaagaggcagcagatcccttatcgtccaaacttaacaaggtcactcaattgaca
ggtttctcggatcctgtatatgcagaagcttatgttcatgtcaatcagtatgatattgtc
ctggatgttcttgttgtaaaccaaaccagtgatactttgcagaactgcacattagagtta
gctactctaggggatctgaaacttgtagaaaaaccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtcaaggtagcatcaacagaaaatggaataattttt
ggcaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggtcctcagt
gatatccatattgacataatggactatatccagcctgcaacttgcactgatgccgagttc
cgtcagatgtgggccgaatttgaatgggaaaataaagtgacagttaacaccaatatgatc
gatttaaatgattatttacaacatatcttaaagtcaaccaatatgaagtgcctgactcca
gagaaggccctttctggctactgtggctttatggcagccaacctgtatgctcgttctata
tttggagaagatgcacttgcaaacgtaagcattgagaagccagttcaccagggaccagat
gctgctgttactggccatataaggattcgtgcaaaaagtcagggaatggccttgagcctt
ggagataaaatcaacctgtctcaaaagaagactagtctataa
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