Phodopus roborovskii (desert hamster): 127228224
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Entry
127228224 CDS
T08852
Symbol
Sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127228224 (Sox6)
Transcription factors [BR:
prob03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127228224 (Sox6)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
127228224
NCBI-ProteinID:
XP_051048689
LinkDB
All DBs
Position
Unknown
AA seq
828 aa
AA seq
DB search
MSSKQATSPFACTADGEETMTQDLTSREKEEGGDQHAASHLPLHPIMHNKPHSEELSTLV
STIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSREREIMNSVTFGTP
ERRKGSLADVVDTLKQKKLEEMTRSEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGT
PESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQ
QQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKP
GDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINPRLKGISDRFGRNLDTFEHGGGH
SYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNTAGAVSPTGIKNEKRGTSPVTQVKDE
TTAQPLNLSSRPKTAEPVKSPTSPTQSLFPASKTSPINLPNKSSIPSPIGGSLGRGSSLD
ILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQPHGVDGKLSSMNNMGLSNCRNE
KERTRFENLGPQLTGKSGEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGA
TVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWK
SMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQE
MRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTY
GMKMDGASLAGNDMINGEDEMEAYDDYEDDPKSDYSSENEAPEPVSAN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaagcaagccacctctccatttgcctgtacagctgatggagaggaaacaatg
acccaggatttgacctcaagggaaaaggaagagggcggtgatcaacatgcagcctcccat
ctgcctctgcaccccataatgcacaacaaacctcactctgaggagctatcaacgcttgtc
agtaccattcaacaagatgctgactgggacagcgttctgtcatctcagcaaagaatggag
tcagagaataataagttatgttccctatattccttccgaaatacgtctacctcaccacat
aagcctgacgaagggagtcgggagcgcgagataatgaacagtgttacttttggaacccca
gaacgccgcaaagggagccttgcggatgtggtggatacactgaagcagaagaagctggag
gagatgactcggtcagaacaagaggattcctcctgcatggaaaaactactttcaaaagat
tggaaggaaaaaatggaaagactaaatacgagcgaacttcttggagaaatcaaaggtaca
cctgagagcttagcagagaaggaacggcaactctctacgatgattacccagctgatcagc
ttgcgggagcagctcctggcagcgcacgatgaacagaaaaagctggcagcctcccagatc
gagaaacagcggcagcaaatggaccttgctcgccaacaacaagaacagatcgcaagacaa
cagcaacaacttctccagcagcagcacaagatcaatctcctgcagcaacagatccagcag
gttcaggggcacatgcctccgctcatgatcccaatttttccacatgaccagcggaccctg
gcagcagctgctgcggcccaacagggattcctcttcccccctggaataacatacaaacca
ggtgataactaccctgtacagttcattccatcaacaatggcagctgctgctgcttctgga
ctcagccctttacagctccagaagggtcatgtctctcacccacaaattaacccaaggcta
aagggcataagtgaccgttttggcaggaatttggacacctttgaacatggtggtggccac
tcttacaaccacaaacagattgagcagctctatgcggctcagctggccagcatgcaggtg
tcacctggagcaaagatgccatcaactccacagccaccaaacacagcaggggcagtctca
cctactgggataaaaaatgaaaagagagggaccagccctgtaactcaagttaaggatgaa
acaacagcccagccgctgaatctctcatcgaggcctaagacagcagagcctgtgaagtcc
ccaacatctcccacccagagcctcttcccagccagcaaaaccagtcctatcaacctgcca
aacaagagcagcatccccagccccattggagggagcctgggaagagggtcctctttagat
atcctgtccagtctcaactctcctgccctgtttggggaccaggacacagtgatgaaagcc
attcaggaggctcggaagatgcgagaacaaatccagcgggagcagcaacagcagccacat
ggggttgatgggaaactgtcctccatgaacaacatgggtctgagcaactgcaggaatgag
aaggaaagaacacgctttgagaacttggggccccagttaacagggaagtctggtgaagat
gggaagctgggcccaggtgtcattgatctcactcggccagaagacgcagaaggaagcaaa
gcaatgaatggctctgcagctaaactacagcagtattattgttggccaacaggaggcgcc
actgtggctgaagcacgagtctacagggatgcccgcggccgtgccagcagtgaacctcac
atcaagcgaccaatgaatgcattcatggtttgggcgaaggacgaaaggaggaaaattctt
caggctttccctgacatgcataactccaacattagcaaaatcttaggatctcgttggaaa
tccatgtccaaccaggagaagcaaccttactatgaagagcaggcccggctaagcaagatc
cacttagagaagtacccaaattacaagtacaaaccccggccgaagcgcacatgcatcgtg
gatggcaagaagctgcggattggggaatacaagcaactgatgcgctcccggaggcaggag
atgcgacagttcttcactgtggggcaacagcctcagattcccatcaccacaggaacaggt
gttgtgtatcctggtgctattactatggcaacgaccacaccatcacctcagatgacatct
gactgctctagcacctctgccagcccagagcccagcctccctgtcatccagagcacgtat
ggtatgaagatggacggcgcaagcctggctgggaacgacatgattaatggagaggatgaa
atggaagcctatgacgactacgaagatgatcccaaatcagactatagcagcgaaaatgag
gccccagagcctgtcagtgccaactga
DBGET
integrated database retrieval system
