Phodopus roborovskii (desert hamster): 127228243
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Entry
127228243 CDS
T08852
Symbol
Vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127228243 (Vps35l)
Membrane trafficking [BR:
prob04131
]
Protein recycling
Others
Retriever complex
127228243 (Vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4698
ArsP_2
Motif
Other DBs
NCBI-GeneID:
127228243
NCBI-ProteinID:
XP_051048749
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MAVFPWHSRNRNYKAELASCRLETVPLECGDYHPLKPITVTESKTKKVSRKGSTSSTSSS
SSSSVVDPLSSVLDGTDPLSMFAATSDPAASGTVTDSSRKKRDKDDNSFVGPDFEPWANK
RGEILARYTTTEKLSINLFMGSEKGRAGAVASAMSEKVRTRLEELDDFEEGSQKELLNLT
QQDYVSRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDT
FGKLVYERIYSMCADSRSALPDHFSPENVNDTAKETCLNWFFKIASIRELIPRFYVEASI
LKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYARAYLCRVGMEVAPHLKESLNKNFFD
FLLTFKQIHGDTVQNQLVAQGVELLSYLPLYSPAMGWIFQCVSYHAPEALLMEMMERCKK
LGNNALLLNSVMSAFRAEFIATRSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPPEN
DRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCRHFTKREVNTVLADVIKHMTPDRAFE
DSYPQLQSIIKKVIAHFHDFSVLFSVEKFLPFLDMFQKESVRVEVCKCIMEAFINTGVEV
RGNKHQQEPTKDPVILNALMHICKTMHDSVNALTLEDEKRMLAHLINGFIKMVSFGRDFE
QQLSFYVESRSMFCNLEPVLVQLIHSVNRLAMETRKVMKGNHSRKTAAFVRACVAYCFIT
IPSLVGIFTRLNLYLHSGQVALANQCLSQADAFFKAAIGLIPEVPKMISIDGKLRPSEPF
LLEFLCNFFSTLLIVPDHPEHGVLFLVRELLNVIQDYTWEDNSDDKIRIYTSVLHLLSAM
SQDTYLYHIDKVDSNDSLYGGDSKFLAENSKLCEAVMAQILEHLKTLAKDEALKRQSLLG
LSFFNSILAHGDLRNNKLNQLSVNLWHLAQRHGCADTRTMVKTLDYIKKHSKQPGMSHLT
ELALRLPLQTRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtttccctggcactcccggaacaggaactacaaagcggagctggcatcttgt
aggttggagacagtgcccctggagtgtggggactaccacccactgaagcccatcactgtt
actgagtcaaagacaaagaaggtgagccgtaaaggaagcacttcatccacatcctcctcc
tcttccagctccgtggtcgaccctctgagcagtgtccttgatggcaccgaccccctctcc
atgtttgcagccacctcagaccctgcagcctcagggacagtcacagacagctccagaaaa
aaacgtgataaggatgacaactccttcgtgggacctgattttgagccttgggccaacaaa
cggggagaaatccttgcccggtacacgactacagagaagctctcaattaatctgtttatg
ggatcagaaaaaggcagagccggggctgtggcttctgccatgtcagagaaggttcggaca
cgcctggaagagttggatgactttgaggagggatcccagaaggagctgttgaacctgacc
cagcaggattatgtgagccgcatagaggagctcaaccagtccctgaaggatgcctgggcc
tcggaccagaaagtgaaggctctgaagattgtcatccagtgttcaaagctgctgtcagac
acgagcgttattcagttctacccaagcaaatttgtccttatcactgacatccttgatacg
tttggaaagctggtctatgagcgcatctactccatgtgtgcggacagccgaagcgcttta
ccagatcacttttccccagagaacgtgaacgacacagccaaggaaacatgcctgaattgg
tttttcaagatcgcttccatccgggaactcattccaagattttacgtggaagcatccatc
ctgaagtgtaacaaattcctctccaaaacaggcatttcagagtgcctgccccgactgacc
tgcatgatcagagggattggggacccgctcgtgtccgtgtacgcccgggcctacctgtgc
cgggtggggatggaagtggccccgcacctcaaggaaagcctcaataagaacttctttgac
ttcctgcttacatttaaacagattcacggagacactgtccagaatcagctggtggcccag
ggtgtggagctgttgtcctatctccctctgtactcgcctgccatgggttggatcttccag
tgtgtctcctaccatgcccctgaggctttgctgatggagatgatggagagatgtaagaaa
ctcggcaacaatgctttgctcttgaactccgtgatgtcagctttcagggctgagttcatt
gccaccaggtctatggacttcattggcatgattaaagagtgcgatgagtctggcttcccc
aagcatctcctttttcgttcgctggggctaaacttggccttggctgatcctcctgagaat
gatcgacttcagattctcaatgaagcttggaaagtcatcactaaattgaagaatccacag
gactacattaactgtgcggaggtgtgggtagagtacacctgcaggcatttcacgaaacga
gaagtgaacactgttctggctgatgtcatcaagcatatgactccggatcgagcatttgag
gactcctatccccagcttcagtcaataattaagaaagtcatagcccacttccacgatttc
tcagttcttttctcagtggaaaagtttctgccatttctggacatgttccagaaagagagt
gtgcgggtggaggtttgcaagtgcatcatggaagcctttatcaatacaggtgtggaggtc
agaggaaacaagcaccagcaggagccaaccaaggaccctgtcatcctgaatgcccttatg
cacatttgcaagaccatgcacgactctgtgaacgctctcactttggaggatgagaagagg
atgctggcccacttgatcaatggatttataaaaatggtctccttcggtcgtgattttgaa
cagcagctcagcttttatgttgagtccaggtcgatgttttgtaacctggagcctgttctt
gtccagttgattcatagtgtgaaccggttggcaatggaaacaagaaaagtcatgaagggg
aaccactccagaaagacagctgcatttgtccgggcctgtgttgcctactgcttcatcacc
attccctccctggtggggatctttacccgcctcaacctctacctgcattctggtcaggtt
gccttggccaaccagtgcctctcccaagctgatgcttttttcaaagctgccattggcctc
attccagaagtcccaaagatgataagcattgatgggaagctgcggccatcggagcccttc
ctcctggagttcctgtgcaatttcttctccacgttattgattgtgccggatcatccagaa
catggagtcctatttttggttcgagaacttctcaacgtgattcaggactacacctgggag
gacaatagtgatgacaaaatccgaatctacacctctgtcctgcacctgctgtctgctatg
agccaggatacctatctttaccacatagacaaagttgactccaatgacagcctgtacggg
ggcgactccaagttcctggctgagaacagcaagctatgtgaggcggtcatggctcagatc
ctggagcacctgaaaaccctggccaaggacgaggccctgaagcgacagagcttgctgggc
ctctccttcttcaatagcatcctagcccatggggaccttcgtaacaataagctgaaccaa
ctctccgtcaacctgtggcacctggcacagaggcacggctgtgcagacacaaggaccatg
gtgaagactctggactacatcaagaagcacagcaagcaacctggcatgagtcacctgaca
gagctggccctgaggctccctctgcaaaccaggacctga
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