Phodopus roborovskii (desert hamster): 127228266
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Entry
127228266 CDS
T08852
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127228266
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prob02000
]
127228266
Transporters [BR:
prob02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127228266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
ABC2_membrane
RsgA_GTPase
AAA_29
DUF2110
AAA_6
Motif
Other DBs
NCBI-GeneID:
127228266
NCBI-ProteinID:
XP_051048785
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MNWLIVNQLTVLLWKNFTLKKRQMISSVTEILAALLFVIMLLIFRAFTDISVVGPYHFTP
QPIATMPSFIKDAKEWELVYVPSDIDVVTEIIENVKKNLNTSIKVRGFPSEAEFEKYILF
DYTSQKVLAAIVFDCGFKNKNDPLPLQVKYHLRFVGVQRTISWPEKIGWKITFLFPNRPS
LQPRNPNVLDGGSPGYIREGFLAVQHALDVSIMLYHESSAGQKLFDEINVLIQRFPYPAH
PQDKLLWISSPFIPLMFILTFSSIVLSIMRSIVFEKEKRLKEYQLIIGLRNWIIWAGYFF
TFFPLYAIIILLICALLFIQVTEPILRYSDFSFIFVFLICYAIASICFAFMISTFFNKTH
LAASAGNLLFFASFFPYNFISEHYEMLDLTSKVTACLSANVALALGINILIKLEIQEIGV
KWHNLWTPANLEDNLIFGYMFGMLLFDAFLYSLVTWYVETVFPGQCGVPQPWYFFLMRSY
WFGKPKIRKIAEETKCLPTIHNCFEVEPTNLVAGIQIKRLHKEFRNNPAINNLSLNVYEG
QITVLLGHNGAGKSTILSILTGMYQSPFRAKGEAYINGYNISDNMTEIRKDLGFCPQHDL
LFDDLTLSEHIFFYCTIKGIYQNINYMEIDHMLSIFNLKDNFHTLSGSMSGGVRRKLSII
IALTGCSKVVILDEPSSGMDPMSRRATWDILQHYKCNRTILLTTHYMDEADILGDRIAIM
VRGTLHCCGSSVFLKQIYGAGYCIVMEKEQHCDINNIFAMIQHHVPGAVLKNDLGSELSF
ILPKKYVSRFEALFTDLEINQKTLGIANFGASITTMEEVFLKVNKLAAPQRNIQAIKPYY
LTYGKMRQDKQQNVNIPRNYNRQKFSYLSEITTIKFNTGFPLYRQQFCSMFIKRALFIWR
NWKLMLLQIIIVLVVTTYLLLALHLDDNDIPERELDLSHYGGTIVPYSISGNSDLALNLT
KNLKIFLKTKNQSLRKIKGDVNDYILESKECRSFCIIALSIKVEKNKTVLTVFFNNEAYH
SSAISLAVLDNILFMTLSGPNASITVFNKPQPQPYYGSNTVPVNGLQIVQCLAFGISVVV
GTFSLQTVTERVSQAQHIQFLSGVYVLTYWLSALLCDLIFFFIPSCILLGIFRFCQVDAF
VVSYNFLDTMLIFMLYGWCVVPLMYLGSFLFHSSTTAYIKLTLFNYFSTVFSIVIYTIVQ
FYDSDFPKFINSLIKTALMILPSYNFAMSISRYFDDYEVKTLCARKFRSIYMDCSEPYTQ
NNVYGFGEHGIGKFLITLAAMGLVFLLLLLSLETVSWNLKNFVFRNIIFYFYNKIRKSRQ
AVVSNQQTKKDEDEDIRQERRKVLTLSSLRSQDTPLILNEVTKIYFKCPVVKAVRNISLM
VRKSECFGLLGLNGAGKTTTFKILTGEETITSGVALIDGNSVIENPRKIRSRIGYCPQTE
SVLNHMTGWELLSMYSRLWGVPEQNINEYVETFLHSMHLEPIANQLIHTYSGGSKRRLST
AIALMGKSSVVLLDEPSTGMDPVAQHLLWDTVTWICKTGKAIIITSHRMEECETLCTRLA
IMLKGSFTCLGSPQHVRKRFGHVYTLTVKINIAKDRDKVAEFKRFIKTTFPGNIKNQEFQ
GIIGYYIPSKEICWGKVFEIMEEAKMLFNLEDYSFKQVTLEQIFLTLANTDKMRLQPNQ
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atgaattggttgatagtcaaccaattaacagttctcctctggaaaaattttacattaaag
aagaggcagatgattagttcagtaacagaaatcttggcagcattgttgtttgtaataatg
ttgttgatattccgtgcattcactgatataagcgttgttggaccatatcatttcacacct
caacccattgctaccatgccttctttcatcaaagatgccaaagaatgggaattggtttat
gtaccttctgatattgatgtggtaactgaaatcattgagaatgtaaagaagaatctcaac
accagtataaaagttcgaggttttccttcagaagctgagtttgagaagtatattctgttt
gattatacatctcagaaagtgctggctgctattgtttttgactgtggcttcaaaaacaaa
aatgatcctctgccacttcaggtaaaatatcatttgcgttttgttggtgtgcagaggacc
atctcgtggccagaaaagataggctggaaaataacatttctttttcctaatcgcccttct
ctgcaacccaggaatccaaatgttcttgatggaggaagtcctgggtatataagggaagga
ttcctggcagtgcagcatgccttggatgtgagcattatgttgtatcatgaaagcagtgct
gggcaaaagctatttgatgaaatcaacgttctcatacagagatttccatacccagctcat
cctcaggataaattactttggatctccagtcctttcatccctttgatgttcatacttacg
ttctcttccattgtactttccattatgcgatccattgtgtttgaaaaggaaaaaagatta
aaggaataccagctcataattgggcttagaaattggatcatttgggctggctatttcttc
acgttcttccctttatatgccatcattatccttttgatatgtgcattactctttatccag
gtaacggagccaatcttgcgatacagtgactttagtttcatctttgtctttcttatatgt
tatgccatcgcatccatatgctttgcctttatgattagcacattcttcaataaaactcat
ttagctgcttctgctggaaacctcctgttttttgccagtttctttccctataacttcatc
tctgaacactatgaaatgttggaccttacttccaaggtgactgcttgtttgagtgcaaat
gttgcattggcactggggattaatattttaatcaagttggaaatacaagagattggtgtt
aaatggcataacctttggacaccagccaatcttgaggataacctcatctttggctatatg
tttggaatgcttttgtttgatgctttcttatacagccttgtcacctggtatgtagagact
gtctttcctgggcagtgcggtgttcctcaaccatggtactttttccttatgcgttcatac
tggtttggcaaaccaaaaattagaaagattgcagaagagacaaagtgcttacccacaata
cataactgttttgaggttgaacctaccaacttggtggcaggtatccaaatcaaacgtttg
cacaaggaatttagaaacaaccccgcaataaacaacttgtcattgaacgtgtatgagggg
cagatcactgttcttctgggacacaatggggcaggaaaatccacaatcttgtctattctc
acaggtatgtatcaatctccattcagggcaaaaggagaggcctatattaatggatataat
atttcagataacatgactgaaattagaaaagacttgggcttctgccctcaacatgaccta
ttgtttgatgacttgacactatcagaacacatttttttctactgtacgataaaaggaata
tatcagaacataaactatatggaaattgatcatatgctgtctatttttaacctgaaagat
aatttccatacattatcaggctcaatgagtggaggagtgaggcgcaagctctccatcatt
atagcacttactgggtgctccaaggtagttattcttgatgaaccatcatctggcatggac
ccgatgtcaagaagggccacctgggatatacttcagcattataaatgcaatcggaccatt
ttattgaccacacactacatggatgaagctgacatcctgggtgaccgcattgccatcatg
gtcaggggaaccttgcactgctgtggctcttcagtcttcctgaaacaaatatatggtgct
ggatattgcatagtcatggagaaggaacaacattgtgatattaacaacatctttgcaatg
attcagcatcatgttccaggtgctgtattgaaaaatgatttaggaagtgagttatcattt
atcctacccaaaaagtatgtatcaagatttgaagctttgtttactgatttggaaataaat
cagaaaacactgggcattgctaactttggagcttcaatcactacaatggaagaggttttc
cttaaggtcaataagctggcagctccccaaaggaatattcaggctatcaaaccctattac
ttgacgtatggaaagatgagacaagataagcagcagaatgtgaatatacccagaaattat
aacagacaaaaattttcctatttgagtgaaattactaccattaaatttaacactgggttt
ccactttaccgtcagcaattttgttccatgtttataaaaagagcactattcatttggcgc
aactggaagttgatgttgctacagataataatagttttggttgttactacatatctctta
ttagctctgcacttagatgataacgacatacctgaaagggaactggatttgagtcactat
ggtggaaccattgtgccttactcaatttcagggaattctgatttggctctgaatctcaca
aagaaccttaagatttttctaaagacaaagaatcaaagcttacgaaaaataaaaggtgac
gtaaatgattacatattggaaagtaaagagtgccgtagcttctgcattattgcactttct
attaaggttgagaaaaataaaacagtactcactgttttcttcaataatgaggcatatcat
tcatctgcaatatccctggcagtattagataacattctttttatgacactatctggaccc
aatgcttccataactgtcttcaataagcctcagcctcaaccttattatggttctaacaca
gtgcctgtaaatggattacaaatagtacagtgtttggcttttggcatttctgtggtggtc
gggacctttagtctccaaacagtgactgaaagggtcagtcaggcccagcacatccagttc
ctgagtggggtatatgtcctcacttactggctttctgccttgttgtgtgatctcatcttc
ttcttcattccttcctgcatactactgggcatattcagattctgccaagtggatgcattt
gttgtgagttacaactttctggacacgatgctgatttttatgttgtatggctggtgcgtt
gtgcctctcatgtatcttggaagcttcctgttccatagtagcactactgcctacatcaag
ctcacactctttaactacttttcaactgttttcagtatcgtcatttacactatagtacaa
ttttatgatagtgactttcctaagttcatcaacagcctcataaaaacagctttaatgatt
ctgcctagttacaactttgcaatgagtatcagcaggtattttgatgactatgaggtgaag
acactttgtgctagaaaattcagaagcatatacatggattgtagtgagccatatactcag
aacaatgtgtatggctttggagagcatgggattggaaaatttctaatcacactggctgcc
atgggtttagttttcctcctcttacttttatccctagagactgtttcctggaacctgaag
aactttgtctttcgtaacattattttttacttctacaataaaatcagaaaaagcaggcaa
gctgtagtatctaatcagcaaaccaaaaaagatgaagatgaagacataaggcaagaaaga
aggaaagtcctcacactgtcatctctcaggtcacaggataccccactgatccttaatgaa
gttacaaagatttattttaagtgtcctgttgtcaaggctgtgagaaatatctcccttatg
gtcaggaagtctgagtgctttggattacttggattaaatggagctggaaaaactacaact
ttcaaaatactgaccggagaagagactatcacttctggagttgcacttattgatggcaat
agtgtcattgaaaatccaagaaagattaggtcaagaattggttactgtcctcagactgaa
tctgtgctgaaccacatgacaggttgggaactactgagcatgtactctaggctgtggggg
gtcccagagcaaaacattaatgagtacgtggaaacctttctgcattcaatgcacctggaa
cccattgccaaccagctcatccacacatacagtggcggaagtaaacgcaggctaagtact
gctattgccttaatgggaaagtcttcagttgtcctcctggatgaaccatctactggcatg
gacccagtggctcagcatctgctgtgggacacagttacatggatctgtaagactggtaaa
gctatcatcataacttctcacagaatggaagaatgtgagacactctgtactaggctagcc
atcatgctgaaagggagttttacatgcctaggcagcccccagcatgtcagaaagaggttt
ggtcatgtatacactctaacagtgaagatcaatattgctaaggacagagataaagttgca
gagttcaaacgatttattaaaacaactttcccaggtaacatcaaaaaccaggaatttcaa
ggaatcattggctactatattccaagcaaggaaatctgctggggaaaggtatttgaaatt
atggaggaagctaaaatgctgtttaatctagaagactattctttcaaacaagtaacactg
gaacaaatctttctgaccttggctaatacagataaaatgagattgcagcccaaccagtga
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integrated database retrieval system
