Phodopus roborovskii (desert hamster): 127228337
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Entry
127228337 CDS
T08852
Symbol
Slx1a
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127228337 (Slx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127228337 (Slx1a)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127228337 (Slx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
Motif
Other DBs
NCBI-GeneID:
127228337
NCBI-ProteinID:
XP_051048927
LinkDB
All DBs
Position
Unknown
AA seq
269 aa
AA seq
DB search
MGPTARPERFFGVYLLYCQNPRHRGRVYVGFTVNPARRARQHNAGRKKGGAWRTSGRGPW
DMVLILHGFPSAVAALRFEWAWQHPQASRRLTHVGPRLRSEASFAFHLRVLAHMLRVPPW
VRLPLTLRWLRPDFRHELSPAPPPHMPIAFGPPPQPLVPKQLTASENDSRRQLDLGSKAS
CMLCARILQDEEGPLCCPHPGCPLKAHIICLAEEFLREEPGQLLPLEGHCPSCKKSLLWG
SLIRQCHVDAEEEEDLELEEEHWTDLLET
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgggacctacagcgagaccggagcgcttcttcggtgtctacctgctctactgccagaac
ccccggcatcggggccgcgtttacgtgggattcactgtcaatcctgctcgtcgggctcgg
caacacaacgccgggcgcaaaaaaggtggcgcctggcggaccagcgggcgaggaccctgg
gacatggtactgatcctgcatggttttccgtctgctgtggctgcccttcggtttgaatgg
gcctggcagcatcctcaagcctcacgccgcctgactcacgtggggccgcgcctgcgcagt
gaggcttcctttgccttccacctgcgggtgttggcacacatgctccgagttcctccgtgg
gtgcgcctccctctaacactgcgctggctgagacctgactttcgccatgaactttctcca
gcaccaccaccacacatgcccattgcctttgggccaccaccccagcccttggtcccgaag
caactcactgcaagtgagaatgacagcaggcgccagctggatctaggttccaaggccagc
tgcatgttgtgtgcgcgtatcctacaggatgaagagggccccctgtgctgtccccaccct
ggttgtcctctaaaagcccacattatctgcctggcagaagagttcctgcgggaagagcct
gggcagcttctgcccctggaaggccattgtccgagctgtaagaagtctctgctttgggga
agtctgatccgacagtgccatgtggatgctgaggaggaagaggacttggaattagaagag
gaacactggacagacttgctggagacctga
DBGET
integrated database retrieval system
