Phodopus roborovskii (desert hamster): 127228670
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Entry
127228670 CDS
T08852
Symbol
Npas4
Name
(RefSeq) neuronal PAS domain-containing protein 4
KO
K26457
neuronal PAS domain-containing protein 4
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127228670 (Npas4)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127228670 (Npas4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
PAS
HLH
Motif
Other DBs
NCBI-GeneID:
127228670
NCBI-ProteinID:
XP_051049566
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MENLGPCIPSLALHRLSPAGPLRSLLLPPSPAPSLSCSTSQDDVGSQGGRRSAPPPQPVA
PAAACFSPASRLPLPPPSLKRAPHACQELYKADGGRRGGQRCRAEPRSGAGASESLSERS
GSKKEEASCASGQDRRCSGAGAGAPQPAIMYRSTKGASKARRDQINAEIRNLKELLPLAE
ADKVRLSYLHIMSLACIYTRKGVFFAGGTPLAGPTGLLSAQELEDIVAALPGFLLVFTAE
GKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTMPSALDADRLFRCRF
NTSKSLRRQSAGNKLVLIRGRFHAHPPGAYWAGNPVFTAFCAPLEPRPRPGPGPGPGPAS
LFLAMFQSRHAKDLALLDISESVLIYLGFERSELLCKSWYGLLHPEDLAHASSQHYRLLS
ESGDIHAEMVVRLQAKHGGWAWIYCMLYSEGPEGPITANNYPISDTEAWSLRQQLNSEDT
QATYVLGTPAMIPSFPESVFSQEQCSNPLFMPALGRPRSTSFPRAPELGLISTSEELPQP
SKELDFSYMPFPSRPEPSLQADLSKDLVCTPPYTPHQPGGCAFLFSLHEPFQTHLPTPSS
SLHEQLTPSTVTFSDQLTPSSATFPDPLTSSLQGQLTETSARSYEDQLTPCTSTFPDQLL
PSTATFPEPLGSPSHEQLTPPSTAFQAHLNSPSQTFPEQLSPNPTKTYFAQEGCSFLYEK
LPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLLTPEASPVKQSFFQYSEKEQNEID
RLIQQISQLAQGMDRPFSAEAGTGGLEPLGGLEPLNPNLSLSGAGPPVLSLDLKPWKCQE
LDFLVDPDTLFLEETPVEDIFMDLSTPDPNGEWGSGDPEAEVPGGALSPCNNLSPEDHSF
LEDLATYETAFETGVSTFPYEGFADELHQLQSQVQDSFHEDGSGGEPTF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctgggtccctgcattccaagcctggctctgcacaggctctcgccagccggc
cccctccgcagcctccttctccccccttcccccgccccctccctctcctgttcgacgtca
caagatgacgtaggaagccagggagggaggaggagcgccccccctcctcagccagtggct
cccgctgcagcttgctttagcccagcctcccgcctcccgctccccccaccgtctctaaaa
cgagccccccacgcctgccaggagctatataaggcggatggaggcaggcgaggggggcag
cgctgccgagcggagcccaggagtggagcgggagcgagcgagagcctgagcgaaaggtcg
ggaagcaagaaagaggaagcctcctgtgcatcgggacaggatcgcaggtgttcgggagcc
ggagctggagctccacagccggcaatcatgtaccgatccaccaagggcgcctccaaggcg
cgccgcgaccagatcaacgctgaaatccggaacctcaaggaactgctgccgttggctgaa
gcggacaaggtccggctatcctacctgcacattatgagtcttgcctgcatctacactcgc
aagggtgtcttctttgctggaggcactcctctggctggccccacggggcttctctcagct
caagagcttgaagacatcgtggcagcactacctggatttctgcttgtgttcacagctgaa
gggaagttgctgtacctgtctgagagtgtgagcgagcatctgggtcactctatggtggac
ctggttgcccagggtgacagtatctacgacatcattgaccctgctgaccatctcactgtt
cgccagcagctcaccatgccctctgctctggatgctgatcgccttttccgttgccgattc
aacacctccaagtcccttcggcgccagagtgcaggaaacaagctggtgcttatccgaggt
cgattccatgctcatccacccggggcctactgggcaggaaaccccgtgttcacagctttc
tgtgccccactggagccaagaccccgccctggccctggccctggtcctggtcctgcttca
ctcttcctggccatgttccagagccgacatgctaaggacctggccctactggacatctct
gaaagtgtcctaatctacctgggctttgagcgcagcgaactgctctgtaagtcatggtat
ggactgctacaccctgaggacctggcccacgcttcttctcaacactaccgcctgttgtct
gaaagtggagatattcatgcagaaatggtagtgagacttcaagccaagcatggaggctgg
gcgtggatttactgcatgctatactcagaaggtccagaaggccctattactgccaataac
taccctatcagtgacacggaagcctggagcctccgccagcagctaaactctgaagacacc
caggcaacctatgtcctaggaaccccagccatgataccctcatttcctgagagtgtcttc
tcccaggagcagtgttctaacccactcttcatgccagccttggggcgtcccagaagcacc
agcttcccccgggcacctgaactaggactgatctcaacatcagaagagcttccccaaccc
tccaaagagctggacttcagttacatgccattcccttctaggcctgagccttccctccaa
gcagacctgagcaaggatttggtgtgtactccaccttacacaccccaccagccaggaggc
tgcgcctttctcttcagcctccacgaaccattccagactcacttgcccaccccttccagc
tctcttcacgaacagctgacaccaagcaccgtgactttctctgatcagttgacacccagc
agtgcaacattcccagacccactaactagttcactacaaggacagttgactgaaacctca
gccagaagctatgaagaccaattgactccgtgcacctctaccttcccagaccagctgctc
cccagcactgccacattcccagaacctctgggtagcccctcccatgagcagctgactcct
cccagcacagccttccaagcacacctgaacagccccagccaaaccttcccagagcaactg
agccccaatcctaccaagacttacttcgcccaggagggatgcagttttctctatgagaag
ttgcccccaagtcctagcagccctggtaatggggactgcacactcctggccctagcacag
ctccggggccccctctctgtggatgttcccctggtgcctgaaggcctgcttacacctgag
gcctctccagtcaagcaaagtttcttccaatactccgagaaagagcaaaatgagatagat
cgtctcatccagcagatcagccaattggctcagggcatggataggcccttttcagctgag
gctggcactgggggactggagccacttggaggactggaacccctgaaccccaacttgtcc
ctgtcaggggctggaccccctgtgcttagtctggatctgaagccctggaaatgccaggag
ctggacttcctggttgaccctgatactttattcctggaagagacgccagtggaagacatc
ttcatggatctctctactccagaccccaatggggaatggggatcaggggatcctgaggca
gaggtcccaggaggggccctgtcaccttgcaacaacctgtccccagaagatcacagcttc
ctggaggacttggccacctatgaaaccgcctttgagacaggtgtctcaacgttcccctac
gaagggtttgctgatgagttgcatcaactccagagccaagttcaagacagcttccatgaa
gatggaagtggaggggaaccaacgttttga
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