Phodopus roborovskii (desert hamster): 127228736
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Entry
127228736 CDS
T08852
Symbol
Sf1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127228736 (Sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127228736 (Sf1)
Spliceosome [BR:
prob03041
]
Complex A
Other components
Complex A specific factors
127228736 (Sf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
SLU7_N
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
CHP02642
Motif
Other DBs
NCBI-GeneID:
127228736
NCBI-ProteinID:
XP_051049691
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MATGANATPLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHTLITEMVALN
PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
KMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDP
QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPASNPPPPSLMS
TTQSRPPWMNSGPSENRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
PPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctggactttccaagtaagaagaggaagaggagc
cgctggaaccaagatacaatggaacagaagacagtgattccaggcatgcccacggttatc
ccccctggactgactcgagaacaagaaagagcttatatagtgcaactacagatagaagac
ctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtcc
ccttcccctgagccaatctacaacagcgaggggaagcggcttaatactcgagagttccgt
acccgcaaaaagcttgaagaggagcgacatacgctcatcacagagatggtcgctctcaac
ccggactttaagccacctgcagattacaagcctccagcaacacgtgtgagcgataaagta
atgatcccccaagatgaatatccagaaatcaattttgtgggtctcttaattggacccaga
gggaacaccctgaagaacattgagaaggaatgcaatgccaagatcatgatacgggggaaa
ggatctgtgaaagaagggaaagttgggcgcaaagatggtcaaatgttgccaggggaggat
gaacctcttcatgctctggttactgctaatacaatggagaatgtcaaaaaggcagtagaa
cagatcagaaacatcctgaagcaaggtattgaaaccccagaggaccagaatgatctacgg
aagatgcagcttcgagagttggctcgcttgaatggcactctacgggaagatgataacagg
atcttaagaccttggcagagctcagagacccgcagcattaccaatacaactgtatgtacc
aagtgtggaggggctggccacattgcttccgattgcaaatttcagaggcctggcgaccct
cagtcagcccaggataaggcacggatggataaggaatatttgtcccttatggctgagcta
ggggaggctcctgtccctgcatctgtgggctctacctctggacctgctaccacacccctg
gccagtgcaccaagacctgctgctcctgccagcaacccaccaccaccgtctctcatgtct
acaacgcagagtcgcccaccctggatgaattctggtccttcagagaatcggccttaccat
ggcatgcatggaggtggtcctggtgggcctggaggtggcccccacagctttccacaccca
ttacccagcctgacaggtgggcatggtggacatcccatgcagcacaacccaaatggacca
ccaccaccttggatgcagccaccaccaccgccgatgaaccagggcccccacccacctgga
caccatggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtc
tatcgcctgcatcaaggaaaaggtatgatgccgccgccacctatgggcatgatgccacct
cctccgccacctcccagtgggcagcccccgcctcctccctctggtcctcttcctccatgg
cagcagcagcagcagcagcctccaccaccccctccgcccagcagcagtatggcttccagc
acccccttgccatggcagcaaaatacgacgactaccaccacgagcgctggcacagggtcc
atcccgccatggcaacagcagcaggcggctgccgcagcttctccaggagcccctcagatg
caaggcaaccccactatggtgcccctgccccccggggtccagccgcctctgccgcccggg
gcccctccccctccgccgcctccgccacctggttccgccggcatgatgtatgccccaccc
ccccctcctccgcctcccatggacccttctaactttgtcaccatgatgggcatgggggtg
gcgggcatgccgcccttcgggatgcctccagctcccccaccgcctccaccacagaactag
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