Phodopus roborovskii (desert hamster): 127228739
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Entry
127228739 CDS
T08852
Symbol
Syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04120
Ubiquitin mediated proteolysis
prob04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127228739 (Syvn1)
04120 Ubiquitin mediated proteolysis
127228739 (Syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127228739 (Syvn1)
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127228739 (Syvn1)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127228739 (Syvn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf_RING_Vps8_fungal
zf-RING-like
zf-ANAPC11
FAR1_N
zf-HC5HC2H
zf-C3H2C3
zf-Nse
zf-RING_Vps41
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
127228739
NCBI-ProteinID:
XP_051049704
UniProt:
A0AAU9ZMY4
LinkDB
All DBs
Position
Unknown
AA seq
611 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAAAPPSTSAAVSRPSGTA
TTTAASTSTSAPTSGSVPGPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSVNPTEET
ASAVSAAPSTSAPSSEVPTPSPGASPPVPEVEKPPAPESVGAAEEIPEDGEPDAAELRRR
RLQKLESPVAH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggcagtggtggcc
catgcctactacctcaaacaccagttctaccccactgtagtatatttgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttcctcttgggcaaagtg
atgggcaaggtgttctttgggcagctcagagcagcagagatggagcaccttttggagcgg
tcgtggtatgctgtcactgagacttgtttggctttcactgtttttcgggatgacttcagt
cctcgcttcgtggcgctctttactctcctcctcttcctcaaatgtttccattggttggct
gaagaccgtgtggactttatggagcgcagccccaacatctcctggctctttcactgccga
atcgtctctcttatgttcctcctgggtatcctggacttcctctttgtcagccacgcttat
catagcatcctgacccggggggcttctgtgcagctggtgtttggctttgagtatgccatt
ctgatgaccatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agcgagaacccgtgggacaataaggctgtgtacatgctctacacggagctgtttacaggc
ttcatcaaggtcctgctgtacatggccttcatgaccattatgatcaaagtgcacaccttc
ccactctttgccattaggcccatgtacctggctatgaggcagttcaagaaagcagtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacacactgtacccagatgccacc
cctgaggagcttcaggcaatggataatgtctgtatcatctgccgcgaagaaatggtgaca
ggtgctaagagactgccctgcaaccacatcttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgcccgacctgccgtatggatgtgttgagggcatcgttgccagcc
cagtcaccaccaccccccgagcctgctgaccaaggaccaccccctgctcctcatcctcca
ccacttctgccacagcctcccaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggcccccaatgggcccctttccacctgtcccacctcccccaagctca
ggagaggctgcagctcctccatccaccagtgcagctgtttctcggcccagtggaacagcc
accaccacagctgctagcactagtacctctgccccaacatctggctctgtccccggccca
gaggctgggcctgcccctggcttccccttccctcctccttggatgggtatgcccctaccc
ccaccttttgccttccccccaatgcctgtgcctcctgcgggctttgctggcctgacccca
gaggagctgcgggcactggagggccatgagcggcagcacctggaagcccggctgcagagt
ctgcgcaacatacacactctgctggatgctgccatgctgcaaatcaaccagtacctcact
gtgctggcctccttggggcctcctaggccagctacttcagtcaaccccactgaagagact
gcctctgcagtatctgctgctccctccaccagtgcccccagctctgaggtccctacccca
tctcctggagcctccccaccagtccctgaagttgaaaagcctcctgctcctgagtcagtg
ggtgctgcagaggagattcctgaggatggagagccagatgctgcagaacttcgccggcgc
cgcctgcaaaagctggagtctcctgttgcccactga
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