Phodopus roborovskii (desert hamster): 127228807
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Entry
127228807 CDS
T08852
Symbol
Taf6l
Name
(RefSeq) TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127228807 (Taf6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prob03021
]
127228807 (Taf6l)
03036 Chromosome and associated proteins [BR:
prob03036
]
127228807 (Taf6l)
Transcription machinery [BR:
prob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127228807 (Taf6l)
Coactivators
SAGA/TFTC/STAGA complex
127228807 (Taf6l)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127228807 (Taf6l)
STAGA complex
127228807 (Taf6l)
TFTC complex
127228807 (Taf6l)
SAGA complex
127228807 (Taf6l)
SLIK complex
127228807 (Taf6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF6_C
TAF
Motif
Other DBs
NCBI-GeneID:
127228807
NCBI-ProteinID:
XP_051049835
UniProt:
A0AAU9ZLR3
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MQSSTGAMSEREERRFVEIPRESVRLMAESTGLELSDEVAALLAEDVCYRLREATQNSSQ
FMKHTKRRKLTVEDFNRALRWSSVEAVCGYGSQEALPLRPAREGELYFPEDREVNLVELA
LATNIPKGCAETAVRVHVSYLDGKGNLAPQGSVPSAVSSLTDDLLKYYQQVTRAVLGDDP
QLMKVALQDLQTNSKIAALLPYFVYVVSGVKSVSHDLEQLHRLLQVARSLIRNPHLCLGP
YVRSLVGSVLYCVLEPLAASINPLNDHWTLRDGAALLLSHIFWTHGDLVSGLYQQILLSL
QKVLTDPVRPLCSHYGAVVGLHALGWKAVERVLYPHLPTYWTNLQAVLDDYSVSNAQVKA
DGHKVYGAILVAVERLLKMKAQAAEPNRGSFGGRRCLRAEDLPWDSLLLQESPSGGGAEP
GFGSGLPLPQGGAGPEDPSSLTLADIYRELYAFFGDSLATRFGTGLPTPTAPRPPGDKKE
PVAAPDSVRKMPQLTASAVVSPQGDESPLGGGPAAASAASENRPLPRVHRARGAPRQQGP
GAGTRDVFQKSRFAPRGAPHFRFIIAGRQAGRRCRGRLFQTAFPAPYGPSPASRYVQKLP
MIGRTGRPARRWALSDYSLYLPL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagctccactggggccatgtcagagagagaagaacggaggtttgtggagatccct
cgggagtcagttcggctcatggcagagagtacagggttggagctgagtgacgaggtggct
gctctgctcgctgaagatgtatgctaccgcctcagagaggccacacagaatagctctcaa
ttcatgaaacacaccaaacggaggaagctaacagtagaggacttcaacagggctctcagg
tggagcagtgtggaggctgtatgtggctatgggtcccaggaggcgctgcccttgcgccca
gcaagggagggtgagctctactttccagaggaccgagaggtgaacctggtggagctggca
ctggccaccaacatccccaagggctgtgcagagacggctgtcagagttcatgtctcctat
ctggatggcaaaggaaacctggcacctcaagggtcagtgcccagcgcagtgtcttcactg
acagatgatcttcttaaatactaccagcaagtgacacgggctgtactgggggatgatcca
cagctgatgaaggtcgccctccaggacctgcagacaaactccaagattgctgcacttctg
ccgtactttgtttatgtggtcagtggggtgaaatctgtaagccatgacctggaacagtta
caccgactactgcaggtggcacggagcctgattcggaacccacacctatgcctggggccc
tatgtccgatccctggtgggcagtgtgctctactgtgtcttggagccactggctgcctcc
atcaaccctttgaatgatcactggactcttcgggatggcgccgcccttctactcagccac
atcttctggactcatggggacctcgtaagtggcctctatcagcagattctgctttccctg
cagaaggtcctgacagaccctgttcggcctctctgttctcactatggggctgtggtaggg
ctgcatgctctaggctggaaggcagtggaacgagtcctgtacccacatctgcccacttac
tggacaaacctgcaggcagtgctggatgactattcggtatctaatgcccaggtcaaagca
gatggacacaaagtctatggagctattctggtggcggtagagagattactgaagatgaaa
gcccaggcagcagagcccaaccgcggtagctttggcgggagaaggtgccttcgtgcagag
gacttgccttgggacagccttctcctccaagagtctccttcggggggtggcgccgaacca
ggctttgggtctggtctcccactgccgcaaggaggcgcagggccagaggacccttcttcc
ttgaccctggcagacatctaccgtgagttatacgccttcttcggtgacagcttggccact
cgcttcggcactggcctgcccacgcccacggccccgcgaccacctggagacaagaaggag
ccagtggccgctccggactcggtgcggaaaatgccgcagctgactgctagtgccgtggtc
agcccgcagggggacgagagcccgctcggcgggggccccgcggccgcctccgccgcctcg
gagaacaggccgctgccgcgcgtgcaccgggcgcggggcgctcctcgacagcagggtcct
ggcgcggggacgcgagatgtcttccagaagagccgctttgcgccccgcggtgcccctcac
ttccgttttatcattgctgggcgtcaggccgggcggcgctgccgcgggcgactcttccag
actgctttccccgcaccctatgggcccagcccggcatcccgctacgtgcagaaattgccc
atgatcggccgcaccggccgcccggcccgccgctgggcgctctcggactattcgctgtat
ctgccactctga
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