Phodopus roborovskii (desert hamster): 127228808
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Entry
127228808 CDS
T08852
Symbol
Nxf1
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03008
Ribosome biogenesis in eukaryotes
prob03013
Nucleocytoplasmic transport
prob03015
mRNA surveillance pathway
prob05014
Amyotrophic lateral sclerosis
prob05164
Influenza A
prob05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127228808 (Nxf1)
03015 mRNA surveillance pathway
127228808 (Nxf1)
03008 Ribosome biogenesis in eukaryotes
127228808 (Nxf1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
127228808 (Nxf1)
05168 Herpes simplex virus 1 infection
127228808 (Nxf1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127228808 (Nxf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127228808 (Nxf1)
03009 Ribosome biogenesis [BR:
prob03009
]
127228808 (Nxf1)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127228808 (Nxf1)
mRNA cycle factors
Stress granule specific factors
127228808 (Nxf1)
Ribosome biogenesis [BR:
prob03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127228808 (Nxf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_4
UBA_8
LRR_9
RRM_NXF1-2
Citrulline_exp
DUF8776
Motif
Other DBs
NCBI-GeneID:
127228808
NCBI-ProteinID:
XP_051049836
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKCEGNRRSGRGGSGIRSSRFEEDDGDVAMN
DPQDGPRVRYNPYPNRPNRRGDTWHDRDRIHITVRRDRAPPERGGAGTSQDGTTKNWFKI
TIPYGKKYDKAWLLSMIQSKCSVPFNPVEFHYENTRAQFFVEDATTASALKAVNHKIHDR
ENRRISIIINSSAPPRTVQNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQN
IDVVLNRTSCMAATLQIIEENIPELLSLNLSNNRLYKLDDMSSIVQKAPNLKTLNLSGNE
LKSEWELDKIKGLKLEELWLDRNPMCDNFQDQSTYISAVRERFPKLLRLDGHELPPPITF
DVEAPTMLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIPS
IPQNSARSLGEYFKGSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDINSFVVDI
SAQTSTLLCFSVNGVFKEVDGKSRDSLHAFTRTFIAVPASNSGLCIVNDELFVRNASPDE
IQRAFAMPAPTPSSSPVPTLSPEQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAF
THLKAKGEIPEVAFMK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagggaagtcatacaacgagcatgatgaccgtgttagtttccctcagaga
agaaagaaaggccgagggcctttccgatggaagtgtgaagggaatcgtcggtctggaaga
ggtggttctggtatacggtcctcccggtttgaggaagatgatggagatgtggcaatgaat
gatccccaagatggcccccgagtaagatacaacccctatcccaaccggcctaatcgtcgg
ggggatacttggcatgatcgagatcgaattcatattaccgtaaggagagacagagctcct
ccagagagaggaggagctggtaccagccaagatgggaccaccaagaactggttcaagatt
acaattccttatggcaaaaagtatgacaaagcgtggctcctgagcatgattcagagcaag
tgcagtgtccccttcaaccccgttgagtttcactatgaaaacacacgagcccagtttttt
gtggaagatgccactactgcttctgcattaaaggctgtgaaccataagattcatgatcga
gaaaacagaaggatatctatcattatcaactcctctgctccaccccgcactgtacagaat
gaattgaagcctgaacaagtagagcagctcaagctgatcatgagcaaacggtatgatggc
tcccaacaagcacttgacctcaagggcctccgctcagacccagatttggtggcccagaac
atcgatgttgttttaaaccggacaagctgtatggcagccaccctgcagatcattgaagag
aatattcctgagctattgtctttgaacttgagcaacaacagactatacaagctagatgat
atgtccagcattgtacagaaagcaccaaacctaaagaccctaaatctttctggaaatgaa
ttgaagtctgagtgggaattagacaagataaaagggctgaagttggaagagctgtggctt
gacagaaaccccatgtgtgataacttccaagaccagtccacttatatcagcgccgttcga
gaacgatttcccaagttattacgcctggatggccatgagttaccccctccaattaccttt
gatgttgaagcccccacaatgctaccaccctgcaagggaagctattttggaaccgagaac
ctaaagagtttggtcctgcacttcttgcaacagtactatgcaatttatgactcaggagat
cgccagggtctcctggatgcctaccatgatggcgcctgttgctcactaagcattccttcc
atcccccaaaactctgcccgaagcttaggtgaatacttcaaaggcagcagaaacgtgaag
aagcttaaagatcccaccctgcggttccggctattaaagcatacacggctcaacgttgtt
gccttcctcaatgagttacccaaaactcaacatgacatcaattcctttgtagtagatata
agtgctcaaacaagcacattgctgtgtttttctgtcaatggagtcttcaaggaagtggat
gggaaatctcgagattctttacatgcgttcacgagaactttcattgctgttcctgccagc
aattcagggctatgtattgtaaatgatgaattatttgtacggaatgccagccctgacgaa
atccaaagagcctttgccatgcctgcacccacaccttcctccagcccagtacccacgctc
tccccagaacaacaggaaatgttgcaagcattctctacccagtctggcatgaacctcgag
tggtctcagaagtgccttcaagacaacaactgggactacaccagatctgctcaagccttc
actcatctcaaggccaaaggagagattccagaagtagcgtttatgaaatga
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integrated database retrieval system
