Phodopus roborovskii (desert hamster): 127229202
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Entry
127229202 CDS
T08852
Symbol
Uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127229202 (Uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prob03400
]
127229202 (Uimc1)
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
127229202 (Uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAP80_UIM
UIM
PRP21_like_P
zf-C2HC_2
XAF1_C
Motif
Other DBs
NCBI-GeneID:
127229202
NCBI-ProteinID:
XP_051050197
UniProt:
A0AAU9ZMF4
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MPRRKKKFKEASESQTLEKDPESTSCVSVKKKRRLEDLLIVISDSDGEEAKEENGLQKMK
MKQSNRSKCLAKRKIAQMSEEEQFALALKMSEQEAREVNSQEEKEEELLKKAIAESLNSC
WSSDASATRSRPLATGPSSNSHQENTKDSGTTEGVWQLVPSSLFKGSHVSQGNEAEERKE
PWDHNENPEEEPVSGSSGSWDQSSQPVFENENLKCFDRCTGPLAEHTQCGKLQESTGSGS
AFPKAVQGRGDTSRQCLPNPADTKGLQDTGGTVHYYWGIPFCPAGVDPNQYTNVILCQLE
VYQKSLKMAQRQLFKKRGFGEPVLPRPPFLIQNGCGQEDETSEKDESISEDTGEEAKEQR
QESRASVSHSETKDFQKSPIKSLKQKLLLEEEPTTSHGQSSQGLFVEETSEEVLKSSEEG
NSVPAAQSIAASTSKRSLVLMPESSADEITVCPETQLSSHEPFDNNREDSSDSSKIPIEV
RRTVSDKQADNRDGEKANPTPAFSSSARVPCPLCGQDFLPTKIEQHAMYCNGLVEQQTVL
TRRQREAKNKRETALDVNKKEKCYLCKSLVPLEEYQSHVEACLQLARDDGGDGTEGGKRA
RVCAAAQGKQQRLRKPKEKGPGQGRLLSLLEQSEHKTTGVEKKSKSSEARPFRIPSPEVE
EASCSGEMQSSVSQLNLNESPIKSFVPVSEATNCLVDFKDQFTFRSRTKSGRGRRKKS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaagaaagaaaaagtttaaagaagcctctgaaagccagaccttggagaaagat
ccagaaagcaccagttgtgtcagtgtaaagaagaagcgtagacttgaggacttactcata
gtgatatctgatagtgatggagaggaagcaaaagaggagaatggattgcagaaaatgaag
atgaaacagtcgaacagatcaaagtgtttggctaaaagaaaaattgcacagatgtctgaa
gaagaacaatttgctttggctctcaaaatgagtgagcaggaagctagggaggtaaacagc
caggaagagaaagaagaggagctcttgaagaaagccattgctgaaagcctgaatagttgc
tggtcttctgatgcttctgctaccagatctcgacctctggctactggaccatcttcaaat
tcccatcaagagaacaccaaagattctggaaccactgaaggcgtatggcagctggtacct
tcatcactgtttaaaggctcacatgtcagtcagggaaacgaggctgaggaaagaaaggag
ccctgggaccacaatgaaaaccctgaagaggagccggtctctggcagctcaggaagctgg
gaccagtcaagccagccagtgtttgagaatgagaaccttaaatgttttgacagatgtact
ggccccttggctgagcacacacagtgtgggaagctgcaggaaagtactgggagtggctct
gctttccccaaagctgtccagggtaggggggacacatctaggcaatgcctccctaaccca
gcagacaccaaaggtctccaggacactgggggcactgtgcactactactggggtattcca
ttctgccctgctggggtagatcctaaccagtacaccaatgtcattctctgccagctggag
gtttatcagaagagcctgaaaatggctcagaggcagctttttaaaaaaagaggctttggg
gagccagtgttacctagacctccttttctgatccagaatggatgtggccaagaagacgag
actagtgagaaagatgaaagcatctcagaagacacgggagaggaagccaaagagcagagg
caggagtctagggcatctgtctcgcactcagaaaccaaggattttcaaaagagtccaatt
aaaagcttgaaacagaaacttttgttggaggaagagccaacaaccagtcatggtcagtct
tcccaaggtctgtttgttgaagaaacttctgaagaagttctgaagagttctgaagaagga
aactctgtgcctgctgcacaaagcattgccgcttcgaccagtaagagaagtttagtcctt
atgccagagagttctgcagacgaaatcactgtttgtcctgagacacaattaagttcccat
gagccctttgacaacaatagagaagactcttcagatagcagcaagatccccattgaagta
agaaggacagtgagtgataagcaagctgataatagagatggtgagaaagcaaatcccact
cctgcattctcatctagtgcccgggtgccctgccctctgtgtggacaagactttcttccc
acaaagattgagcaacatgccatgtactgcaatggcctggtggagcagcaaacagtgttg
actcggagacaaagagaggccaagaacaaacgtgagactgccctggacgtcaacaagaag
gagaagtgttacctgtgtaagtccctggtcccgcttgaagagtaccagagccacgtggag
gcctgcctccagcttgcgagggatgacggaggagatgggactgaagggggtaagagggca
agagtgtgtgcagctgcgcaggggaagcagcagcggctgaggaagcccaaggaaaaaggc
ccaggtcaaggtagactgctcagtctcttggaacagtctgagcacaagaccacaggtgta
gagaagaaaagcaagtcttcagaagcaagacccttcaggataccttcaccagaggtggaa
gaggctagctgcagcggagagatgcagagttctgtctcacagctcaacttaaatgagtct
cccatcaagtcttttgttcctgtttcagaggccacaaattgcttagtggattttaaagac
caattcactttccggtcacggaccaaatcaggcagaggaaggaggaaaaaatcttga
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