Phodopus roborovskii (desert hamster): 127229270
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Entry
127229270 CDS
T08852
Symbol
Kdm1b
Name
(RefSeq) lysine-specific histone demethylase 2 isoform X1
KO
K19413
lysine-specific histone demethylase 1B [EC:1.-.-.-]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127229270 (Kdm1b)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
127229270 (Kdm1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
Pyr_redox
zf-CW
Pyr_redox_2
SWIRM
Thi4
DAO
HI0933_like
FAD_binding_3
Pyr_redox_3
FAD_oxidored
FAD_binding_2
NAD_binding_9
Lycopene_cycl
GIDA
2-Hacid_dh_C
AlaDh_PNT_C
NAD_binding_7
Attractin
Tsg
YjeF_N
Shikimate_DH
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
127229270
NCBI-ProteinID:
XP_051050283
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MATPRGRARKRGTFELSADSLPLRSSGRQAKKKAAETTDEDEDGSSEKKYRKCEKAGCTA
MYPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYSAWKRVWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECGKWRQLTKEIQLTPHMARTYRCGIKLNTITKTD
IPDHCSLPEDLRVLEVSNQWWYSMLIQPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNRA
TATTTSSASPGKMEPSKAASSPLVLGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFP
EYSRDPTMYLALRNLILALWYTNCKEALTPQKCIPQIIVRGLVRIRCVQEVERILYFMTR
KGLINTGVLTVGAGQHLLPKHYHNKSVLVVGAGPAGLAAARQLHNFGMKVTVLEAKDRIG
GRVWDDKSFKGVVVGRGPQIVNGCINNPVALMCEQLGISMHKLGERCDLIQEGGRITDPT
IDKRMDFHFNALLDVVSEWRKDKTLLQDVPLGEKIEEIYRAFVKESGIQFSELEGQVLQF
HLSNLEYACGSSLQQVSARSWDHNEFFAQFAGDHTLLTPGYSTIIEKLAEGLDIRLKSPV
QSIDYTGDEVQVTTTDGMGHSAQKVLVTVPLAILQRGAIQFNPPLSEKKMKAINSLGAGI
IEKIALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVYYDMDPQQQSVLMSVITGEAVA
SLRTMDDKQVLQQCMDILRELFKEQEIPDPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAY
DIIAEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacctcgagggagggcaaggaagagaggtactttcgagctttctgcagatagc
ctgcctttgaggagctccgggaggcaggcaaagaagaaagcagcagagaccacagacgag
gatgaagatggttcgtcggaaaagaagtacaggaagtgtgaaaaggcaggctgtacagca
atgtatccagtgtgctttgcaagtgcgtctgaaagatgtgccaaaaacggctacacctcc
cgatggtatcacctttcctgtggggaacatttctgtaacgaatgctttgaccactactac
agaagccacaaagatggatatgacaaatacagtgcctggaaaagagtgtggaccagcaat
ggcaagacagagccaagccccaaggcattcatggcagaccagcagctgccctactgggtt
cagtgcacaaaaccagagtgtggaaagtggaggcagctcaccaaggaaatccagcttact
ccacacatggcaagaacttaccgctgcggcataaaactaaatactattaccaagactgac
atccctgatcattgttctctccccgaggatctaagagtgctggaagtttccaaccaatgg
tggtactccatgcttatccagcctcctttgctgaaagacagcgtggccgcaccactgctc
tctgcctactaccccgactgtgttggaatgagcccctcctgtaccagcacaaaccgtgcc
acagccaccaccaccagcagtgccagcccagggaagatggagccctccaaggcggcctcc
tccccacttgttttaggcatgaaccgctacttccagccattttaccagcccaatgagtgt
ggtaaagctctgtgtgtgaggcccgatgtgatggagctggatgagctttatgagtttcca
gagtattctcgagatcctaccatgtacctggctttgagaaacctcatcctcgctctgtgg
tacacaaattgcaaagaagctcttacccctcagaagtgcattcctcaaatcatcgtccgt
ggcctcgtgcgcattcgatgcgttcaggaagtagagaggattctttactttatgacgagg
aaaggcctcatcaacacgggagttctcactgtgggagccggccagcatcttcttcctaaa
cactaccacaataaatcggttctggttgttggggctggtccagcaggcttagcagctgct
aggcaactccataactttgggatgaaggtgacagttctggaagccaaagatcgaattgga
ggccgagtatgggatgacaagtcttttaaaggcgtcgtagtaggaagaggaccccagatt
gtcaatggctgtattaataacccagtagcactaatgtgtgagcaacttggcatcagcatg
cataagttgggagaaagatgtgacttaattcaggaaggtggacggataactgaccccact
attgacaagcgcatggattttcattttaatgctctcttggatgttgtctctgagtggagg
aaggataagactctgctccaagatgtccctttaggagagaagatagaggagatctaccga
gcttttgtaaaggagtctggcatccagttcagcgagctggagggacaggtgctgcagttc
cacctgagtaacctggagtacgcctgtggcagcagccttcagcaggtgtctgctcgatcc
tgggatcacaatgaattctttgcccagtttgctggtgaccatactcttctaactcctgga
tactccactatcattgaaaaactggctgaaggactggacattcgcctcaagtctccagtg
caaagtatagattatactggagatgaagtgcaagttaccacgacagatggtatggggcat
tctgcacaaaaggtattagtcactgtaccactggctatactgcagagaggtgccatccag
tttaatccaccattgtcagagaagaagatgaaggccatcaatagcttgggcgcaggcatc
attgaaaagattgccttgcagtttccgtatagattttgggacagtaaagttcaaggggct
gacttttttggtcatgttcctcccagtgccagccagcgagggctcttcgcagtatactat
gacatggaccctcagcagcagagtgtactgatgtccgtgatcacaggggaagcagttgca
tccctcaggaccatggatgacaagcaggtgttacagcagtgcatggacatccttcgggag
ctgttcaaggagcaggaaatcccagatcccaccaagtattttgtcacaaggtggagcaca
gagccatggatccagatggcatatagtttcgtcaagacatttggaagtggtgaggcctat
gacatcattgctgaagaaatacaaggaactgtcttctttgctggtgaggcaacaaacagg
catttcccacaaactgttactggggcctatttgagtggtgttcgagaagcaagcaaaatt
gcagccttttaa
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