Phodopus roborovskii (desert hamster): 127229273
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Entry
127229273 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: nibrin-like
KO
K10867
nibrin
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03440
Homologous recombination
prob04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127229273
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127229273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prob03032
]
127229273
03400 DNA repair and recombination proteins [BR:
prob03400
]
127229273
DNA replication proteins [BR:
prob03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127229273
DNA repair and recombination proteins [BR:
prob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127229273
BRCA1-C complex
127229273
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nbs1_C
NIBRIN_BRCT_II
FHA
RTT107_BRCT_5
BRCT
Yop-YscD_cpl
PTCB-BRCT
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
127229273
NCBI-ProteinID:
XP_051050292
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MWKLLPAAGAAPGEPCRLLAGIEYIVGRKNCAILIENDQSISRNHAVLTANLPVTNLSQT
HEIPTLTIKDNSKYGTFINEEKIQNGISYTLKTGDRVTFGVFESKFRVEYEPLVVCSSCL
DVSGKTVLNQAVLQLGGLTVNNWTEECTHLIMSSVKVTIKTICALICGRPIVKPEYFXEF
LKAVESKKQPPETESFYPPIDEPAIGNKSVDLSGRQERRQIFKGKTFVFLNAKQHKKLSS
AIVFGGGEARLITEENEEEESFFSAPGTCVVDIGITNTQIIITDSQKTWIHLIMDILQRH
GLRPIPEAEVGLAVIFMTTENYCNPQGQPCTELKTTTPGPSLSQGLSVNGKIMRSIPMNM
TTYVADTESEQADTCMSFSERPKEVKMSGVEQSIRKPSQETYSVKGAPQSSAKTNNVVSH
TLVREKSSNYQLSPVKFPAANRSKDCTSQQQQNSIKNYFQPCTKKRERDEENPAMSSSKS
SRMELSCSLLEQTQPTIPSVWKSKEHPSQSEPVDEETDRLFVGDRDIKPNGKSPASKSLS
MENLKPKKRTIDLAMEEEVLEELPKSAEPELAVQVKVEKQETDVSIRKKPRIDVGRSTHL
SGDMVPESNKITQEDETEKRVELKRELLWSTKDETANSDELQDSSELLPRKVLLTEFRSL
VVSSYNSRNLCVLNDCGQMKNFKKFKKVMFPGAGRLPHIIGGSDLIAHQARKNTELEEWL
KHEMEVQRQQAKEDSLADDLFRYNPNVKRR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagctgctcccggccgctggtgcggctccaggagaaccatgcagacttttggct
ggcatagagtacattgttggaaggaaaaactgtgccattctaatagaaaatgatcagtca
atcagccgaaaccatgctgtattaacagcaaaccttcctgtaaccaacttgagtcaaaca
catgaaattcctacattaacaataaaagataattctaagtatggaacctttattaatgag
gaaaaaatacagaatggcatttcctacactttgaagacaggagatagagttacctttggg
gtgtttgaaagtaaattcagagtggaatatgagccgttggttgtttgttcttcttgttta
gatgtctctgggaaaactgttttaaatcaagctgtactacagcttggaggacttactgtc
aacaactggacagaagaatgtactcaccttatcatgtcgtcagtcaaagtcaccattaaa
actatatgtgcactcatttgtggacgtcccattgtaaagccagaatactttnctgaattt
ctcaaagcagttgagtctaagaaacagcctccagaaactgaaagtttttacccacccatt
gatgaaccagctattggaaataaaagtgttgatctgtcaggacgacaagaaaggagacaa
atcttcaaagggaaaacatttgtatttttaaatgccaaacagcataagaaattgagttca
gccattgttttcggaggaggggaagccaggctgattacagaagaaaatgaagaagaagag
agtttcttttcagctcctggaacttgtgttgttgatataggaataacaaatacacaaatc
ataattactgactcccagaaaacatggattcatttgataatggatattcttcaaaggcat
ggtcttagacctattcctgaagcagaagttggactggctgttatttttatgactacagag
aattactgtaatcctcagggtcagccttgtacagaattaaaaacaacaactccaggacca
agcctttcccaaggcttgtcagtgaatggaaaaataatgcggagtattcctatgaatatg
acaacgtatgtagctgacacagaatcagagcaagcagatacatgtatgtcttttagtgaa
agaccaaaagaagtgaagatgtctggagtggaacaaagcattaggaagccttcacaggaa
acttatagtgtgaagggggccccccaatccagcgccaagactaataatgtggtgtcacat
accctggttagggagaagagctcaaactatcagctttccccagtgaaattccctgctgct
aatagaagtaaagattgcacttcgcagcagcagcagaactccatcaaaaactacttccag
ccatgcaccaaaaagagggaaagggatgaagaaaatccagcaatgtcctcatccaaatca
tcaagaatggaactgtcttgttctcttctagaacaaacacagcctactataccctcagtg
tggaaaagcaaggagcatccatctcagagtgagcctgtggatgaggaaacagacaggtta
tttgtgggtgatagagacataaaaccaaatgggaagagtcctgccagtaaatcactttcc
atggaaaatcttaaaccaaaaaaaagaacaattgatttggccatggaagaggaagtactg
gaagagttacccaagagtgcagaaccagagctggcagttcaagtgaaagttgaaaagcaa
gagacggatgtcagcatcagaaaaaagccaagaatagatgttggaaggagtactcacctt
agtggtgacatggtaccagaaagcaacaaaataactcaagaagatgaaacagaaaagaga
gttgaactcaagagagaattactgtggtcgacaaaagatgaaacagctaacagtgatgaa
cttcaagacagcagtgagctgcttccaagaaaagtgctactaactgaatttagatcattg
gttgtcagtagctacaattccagaaatctgtgcgtactaaatgattgtggtcaaatgaag
aatttcaagaaattcaagaaggtcatgtttcctggagcaggaaggcttccacacatcata
ggaggatcagatctaatagctcatcaagctcgaaagaatacagagttagaagagtggttg
aaacatgaaatggaggtacaaagacagcaagcaaaagaagatagtcttgctgatgatctg
tttagatataatcctaatgtaaaaagaagataa
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