Phodopus roborovskii (desert hamster): 127229276
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Entry
127229276 CDS
T08852
Symbol
Nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03250
Viral life cycle - HIV-1
prob05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127229276 (Nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127229276 (Nup153)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
127229276 (Nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127229276 (Nup153)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127229276 (Nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127229276
NCBI-ProteinID:
XP_051050298
UniProt:
A0AAU9ZPC2
LinkDB
All DBs
Position
Unknown
AA seq
1469 aa
AA seq
DB search
MASGAGGIGGGGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQ
RYFNKSENACSCSTDAGEVPHWPENREDERVIYTDEDNRNIDDGRITPEPAGSNTEEPST
TSTASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQ
HDDDNISTTSGFSSRASDKDIAVSKSTSLPPLWSPEADRSHSLSQHTATSSKKPAFNLSA
FGTLSTSLGNSSILKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRNTPYQAPVRRQMKAKQ
LNAQSYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLDRSGLDSSAFQAKKE
KVDSQYPPVQRLMTPKPVSIATNRTIYFKPSLTPSGDLRKTNQRIDKKNSMVNEKNISRQ
NRDQESGFSYPNFSIPAANGLSSGVGGGGGKMRRERTRYVASKPPVEEEVETPVLPQISL
PISSSSLPTFSFSSPVISASSSSPVSSPQPLPNKVQTSLGSTGSPVFTFSSPIVKSTQAD
VLPPTSIGFTFSVPVAKTEISGSNSSSKPILSSSAQDNIVVNSSSYKKRSATCEDPFTPA
KILREGSVLDILKTPGFISPKVDSPAVQPTTTSPVVYTRPAISTFSSSGSEFGESLKAGS
LWQCETCLIQNKVTDNKCIACQAAKLSPKETAKQAGIGTPSKSDKPASATGTGFGDTFKP
AVGTWDCDTCLVQNKPEAVKCVACETPKPGTGVKRTLPLAVASESPVTASSSSCTGTTGT
LGFGDKFKRPVGSWECPVCCVCNKAEDNKCVSCMSEKPGSVSASSSSPVSASLSSGGCLG
LDKFKKPEGSWDCEVCLVQNKADSTKCIACESAKPGTKSEFKGFGTSSSLNPAPSTFKFG
IPSSSSGPSQTFTSTGNFKFGDQGGFKLGTSSDSGSTNSMNTNFKFSKPTADFKFGVSSD
SKTEEIKNDSKNDNFKFGLSSGISNPASSAPFQFGVSTLGQQEKKEEPPKSSSAGFSFGA
GVSNPTTAATDTTVTLDNKSGFNFGTIETKSVSVTPFTYKTTEARKDDSSATKGGFTFGK
VDSASLPSASVFVLGRTEEKQQEPVTSTSLVFGKKVDNEEAKCQPVFSFGNSEQTKDESS
SKPTFSFSVAKPSVKESEQLAKATFSFGNQTNTTTDQGVAKPVFSFLNSSSSSSSAAATS
SSGGIFGSSTSSSNPPVAAFVFGQASNPVSSSAFGNSAESSTTQSLLFSQDSKPATTSTT
GSTAPPFVFGSGAINNSTTSSGFSFGATTSSSSGSSFVFGTGHSAPSASPAFGANQTPTF
GQSQGGSQPNPPSFGSISSSTALFSAGSQPAPPPTFGAVSSSSQPPVFGQQPSQSAFGSG
TAPNSSSVFQFGSSTTNFNFTNNNPSGVFTFGANPSMPAASAQPSGSGGFQFSPSPASFT
MGSNGKNMFSSSGTSVSGRKIKAAVRRRK
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccggaggcatcggagggggcggcggcggcggcggcggcggcaagatc
cggacgcgtcgttgccaccaggggccggtgaagccttaccagcaggggcgaccccagcac
cagggcattcttagcagggttacagaatctgttaagaatattgttccagggtggttacag
agatacttcaacaagagcgaaaatgcgtgtagctgttcaacagatgcaggtgaagttcca
cactggccagaaaatagagaagatgagcgggtaatttatactgatgaggacaacaggaac
attgatgatgggagaattacccctgagccagcaggcagtaacacagaagaaccttcgacg
accagtactgcttcaaattatccagatgtgttaacaaggccttcacttcatcggagtcat
ctgaatttttccatgttggaatctcctgcattacactgtcagccttccacatcctctgca
ttcccaattggtagttctggattttccctcgtaaaagaaattaaagattctacctctcag
catgatgatgataacatctcaactaccagtggtttttcttcaagagcttctgataaagat
atagctgtttcaaagagtacttccctgccacctctctggtcccctgaagcagaccgttct
cactcactctcacaacatactgccaccagctccaaaaaaccagcattcaacttgtctgcc
tttggaacactttccacctcacttgggaattcttcaattcttaaaacaagtcagcttgga
gactctcctttctatcctggcaaaacaacatacggtggagcagctgctgctgtaagacag
aataaagtacgaaatacaccttatcaggcaccagttagaagacagatgaaagctaagcag
cttaatgctcagtcttatggcgtgactagctcgacagcacgacggatattgcagtcatta
gagaagatgtcaagccctcttgcggatgcgaaaagaattccatctgctgtttcttctcct
ctgaattctcctcttgataggagtgggttagacagctcagcttttcaggccaaaaaagaa
aaggtggactctcagtatccccctgttcagagactaatgaccccaaagccagtttccata
gcaacaaatagaactatctattttaaaccatctctgaccccatctggtgacttaaggaag
actaatcaaaggatagataaaaagaacagtatggtaaatgaaaaaaatatctcaagacaa
aatagagatcaagaaagtggcttttcataccccaatttcagtattcctgcagccaacggt
ttatcttctggagtaggtggtggaggtggcaagatgagaagagagagaacacgctatgtt
gcttctaaacctccagtggaggaggaagtggaaacaccagtgttaccgcagatctctcta
ccaatcagcagctcctcactgcctaccttcagttttagttcccctgtgatctctgcttcc
tcatcgtcaccggtcagctctcctcagccattaccaaacaaggtacagacctctctgggc
agcactggcagtcctgtgttcacattttcatctcccattgtaaaatcaacacaggcagat
gtgctacctccaacatcaattggatttacatttagtgtgcctgttgcaaaaacagaaatt
tctggctctaatagttcttcaaaacctattttaagtagttcagctcaagataacattgta
gtgaatagttcaagctataagaagcgaagtgccacttgtgaggacccatttactcctgca
aagatcctgagagaaggaagtgttctagatattctgaaaacccctggttttatatcacca
aaggttgattctcctgctgttcagcccaccactacaagcccagtggtttatacaagacca
gctataagtactttttcttctagtggaagtgaatttggagaaagtttaaaagctggatca
ttgtggcagtgcgaaacgtgtctaatccagaacaaagtcacagacaataagtgcatagcc
tgtcaagcagcaaaactatcaccaaaagaaactgctaaacaggctggaattgggacacca
agcaaaagtgacaaacctgcttctgcaacagggacagggtttggagatacatttaaacca
gcagtaggaacttgggattgtgatacctgtttagtgcaaaataagcctgaagcagtaaaa
tgtgtagcctgtgaaacacctaaacctggcactggcgtgaagagaaccctgcctttggca
gtggcttcagaaagtcctgtgactgcttcctcttctagctgcactgggaccactggtaca
ctaggatttggagataaattcaaaaggcctgtgggatcttgggaatgtccagtatgctgt
gtttgtaataaggcagaagataataaatgtgtctcctgtatgtctgagaaaccaggttca
gtgtctgcctcaagcagcagccctgtctctgcttctctgtcttctggaggttgtctagga
ttggataagttcaaaaaacctgagggaagctgggactgtgaagtgtgcctagtacaaaat
aaagcagactctactaagtgcatagcgtgtgaaagtgcaaagccaggcacaaagtcagag
tttaaaggttttgggacatcttcatctttaaatccagcaccctcaaccttcaaatttggt
attccatcgtcctcttctggaccttctcagacttttacaagcactggaaattttaaattt
ggagatcagggaggattcaagttaggcacttcatctgactctgggtctacaaactccatg
aatacaaactttaaattttctaaaccaactgctgattttaaatttggagtatcttctgat
tccaaaactgaagaaattaaaaacgacagcaagaatgataattttaagtttggactttct
tctggcataagcaacccagcttcttcagctccatttcagtttggggtatctactcttggg
cagcaagaaaagaaagaggagccccctaagtcttcatctgcaggctttagctttggtgca
ggggttagcaaccctaccactgctgctactgataccacagtgaccttggacaacaagagt
ggcttcaactttggaaccatagaaactaagagtgtttcagtgactcctttcacatataaa
acaacagaagcaaggaaagatgattcttctgccaccaagggcgggttcacattcggtaaa
gtggactctgcctctttgccatctgcctcagtgtttgttttgggacggacagaggagaaa
cagcaagaacctgttacttctacttctttggtgtttggaaagaaagtcgacaacgaggag
gcaaagtgtcaaccagtattttcctttggaaattcggagcaaaccaaagatgagagttct
tccaagccgacattcagtttcagtgtggcaaaaccatctgtgaaagagtctgagcagtta
gctaaggccaccttttcctttgggaatcaaaccaatactacaactgatcaaggtgtagca
aagccagtgtttagcttcttgaacagcagttcctctagctccagtgcagcagccacttca
tccagcggtggcatatttggtagttccacctcctcctccaaccctcccgtggcagccttt
gtgtttggacaggccagcaaccctgtcagcagctctgccttcggtaactctgcagagtcc
agcacaactcagtctttgttattttctcaagatagcaagcctgccaccacatccaccacc
ggctcaactgcccctccatttgtgtttggatcaggagccatcaataacagcaccacatca
tctggcttcagtttcggagctaccacatcaagctcttcaggatcctcctttgtatttggc
actggacattcagcaccatctgctagtccagcatttggtgctaaccagaccccaacattt
ggacaaagtcaaggtggcagccagcctaaccctccaagcttcggctctatatcgtcctca
acagcactattttctgctggttcccagcctgcaccaccacctacttttggggcagtgtca
agcagcagccaacctcctgtgtttgggcagcagcctagtcagtctgcctttggctctggg
acagctcctaattccagttctgttttccaatttggcagcagcactacaaattttaacttc
acaaacaataatccatcaggagtgttcacatttggtgcaaatcccagcatgccagcagct
tcagcccagccctcaggttcagggggctttcaattcagcccatctccagcgtcatttaca
atggggtcaaatggaaaaaatatgttctcttcttccggaacttcagtttctggtcgcaag
ataaaggctgctgttagacgcaggaaataa
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integrated database retrieval system
