Phodopus roborovskii (desert hamster): 127229282
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Entry
127229282 CDS
T08852
Symbol
Atxn1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04330
Notch signaling pathway
prob05017
Spinocerebellar ataxia
prob05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127229282 (Atxn1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
127229282 (Atxn1)
05022 Pathways of neurodegeneration - multiple diseases
127229282 (Atxn1)
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Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
127229282
NCBI-ProteinID:
XP_051050306
UniProt:
A0AAU9ZP85
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Position
Unknown
AA seq
790 aa
AA seq
DB search
MKSNQERSNECLPPKKREIPATSRPSEEKATTLPSDNHCVEGVAWLPSTPGSRGHGGGRH
GPAGTSGELGLQGMGLHKALSTGLDYSPPSAPRSVPTATTLPAVYPPPQSGTPVSPVQYA
HLSHTFQFIGSSQYSGPYAGFIPSQLISPSGNPVTSAVASAAGATTPSQRSQLEAYSTLL
ANMGSLSQAPGHKVEPPPQQHLGRAAGLVTPGSPPPTQQNQYIHISSSPQSSGRAASPPP
IPVHLHPHQTMIPHTLTLGPSSQVVVQYSDAGGHFVPRESTKKAESSRLQQAMQAKEVLN
GEMEKSRRYGAPSSVELSLGKASGKSVPHPYESRHVVVHPSPADYSSRDTSGVRGSVMVL
PNNNTPSADLEAQQTTHREASPSTLNDKSSLHLGKPSHRSYALSPHTVIQTTHSASEPLP
VGLPATAFYAGTQPPVIGYLSGQQQAITYAGSLPQHLVIPGTQPLLIPVGSPDMDTPGAA
SAIATSSPQFAAVPHTFVTTALPKSENFNPEALVTQAAYPAMVQAQIHLPVVQSVASPAT
APPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPG
VAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISL
TLKNLKNGSVKKGQPVDPASVLLKHAKTDSLAGSRHRYAEQENGINQGGTQVLSENGELK
FPEKVGLPAAPFLTKIEPSKPTATRKRRWSAPETRKLEKSEDEPPLTLPKPSLIPQEVKI
CIEGRSNVGK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcggagcaatgaatgcctgcctcccaagaaacgtgagatcccc
gccacaagccggccctctgaggagaaggccactactctgcccagcgacaaccactgcgtg
gagggtgtggcatggctccccagcacccctggtagccgcggccatgggggtgggcggcat
gggccagcagggacttccggggagcttggtttacaaggaatgggtttacataaagcactg
tccacagggctggactactccccacccagcgcccccaggtcagtccccacagccaccacg
ctgcccgcagtgtaccctcctcctcagtcagggactccggtgtctccggtgcagtacgcc
catctgtcgcacaccttccagttcattgggtcctcccaatacagtgggccctacgctggc
ttcatcccttcccagttgatctccccatcaggcaacccggtcaccagtgcagtggcctca
gctgcaggggccaccactccatcacagcgctcccagctggaggcctattccaccctgctg
gccaacatgggcagtctgagccaggcaccaggacataaggtcgagcccccaccgcagcag
cacctcggcagggctgcgggactagtcaccccggggtcccctccacccacccagcagaat
cagtacattcatatttccagctctccacagagctctgggcgggcagcatctcctccaccc
atcccggttcacctccatccccatcagacgatgatcccgcacacactcaccctggggccc
tcgtcccaggtggtcgtacaatacagcgacgctggaggccactttgttcctcgagagtcc
accaaaaaagcagaaagcagcaggttgcagcaggctatgcaggccaaggaggtcctgaac
ggggagatggagaagagcaggaggtatggggcaccgtcctctgtggagctgagcctggga
aaggcaagcggcaaatcagtgcctcatccctatgagtccaggcatgtggtggtccaccca
agcccagcagactacagcagtcgtgatacctctggggtccgtggatccgtgatggtcctg
cccaacaacaacacaccctcagccgacctggaggcacaacagaccacacatcgagaggcc
tcgccatccaccctcaatgacaagagcagcctgcacttagggaagcccagccaccgctcc
tatgcactgtccccacacacggtcattcagacgacacacagtgcatcagagcctctcccg
gtgggcctgccagccacagccttctacgctgggactcagcctcctgtcatcggctacctg
agtggtcagcagcaagcaatcacctatgccggcagtctgcctcagcacctggtgatccca
ggcacccagcctctgctcatccccgtgggcagccctgacatggacacacctggggcagcc
tcggccatagccacatcttcaccccagtttgctgcagtgcctcacacgtttgtcaccacc
gccctgcccaagagcgagaacttcaaccctgaggccctggtcacccaggccgcctaccca
gccatggtgcaggcccagatccacctgccggtggtgcagtcggtagcgtccccggccacg
gcaccacccacgctgccgccatatttcatgaaaggctctataatccaactggccaacgga
gagctgaaaaaggtggaggacctgaagacggaggacttcatccagagtgcagagatcagt
aatgacctcaagatcgactccagcacagtggagaggattgaggacagtcacagccccggt
gtggccgtgatacagttcgccgttggtgaacatcgagcccaggtcagtgttgaagttttg
gtagagtaccctttttttgtgtttggacagggctggtcgtcctgctgtcctgaaagaacc
agccagctctttgatctgccctgttccaaactctctgttggggacgtctgcatctcgctc
accctcaagaacctgaagaatggctctgttaaaaagggccagcccgtggaccctgccagt
gtcctgctgaagcacgcaaagaccgacagcctggctggcagcagacacagatatgccgag
caagaaaacggaatcaaccagggaggcacccaggtgctctctgagaatggtgaactgaag
tttccagaaaaagtaggattgcctgcagcacccttcctcaccaaaatagaaccgagcaag
cccacagccacacggaagaggaggtggtcggcgccggagacccgcaaactggagaagtcg
gaggacgagccaccgttgactcttcccaagccttcgctcattcctcaggaggttaagata
tgcatcgaaggccgatctaatgtgggcaagtag
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