Phodopus roborovskii (desert hamster): 127229454
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Entry
127229454 CDS
T08852
Symbol
Carmil1
Name
(RefSeq) LOW QUALITY PROTEIN: F-actin-uncapping protein LRRC16A
KO
K20493
leucine-rich repeat-containing protein 16
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127229454 (Carmil1)
Membrane trafficking [BR:
prob04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
127229454 (Carmil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Spectrin_5
Muted
IL34
Cep57_CLD
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
127229454
NCBI-ProteinID:
XP_051050514
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MTDESSDVPRELMESVKDVIGRKIKISVKKKVKLEVKGDRVENKVLVLTSCRAFLLSARI
PTKLELTFSYLEIHGVICHKPAQMVVETEKCSMSMKMASPEDVSDVLAHIGSCLRKIFPG
LSPLRIMKKVSMEPPERLASLQAVWDSQTLAEPGPCGGFSQMYACVCDWLGFSYREEVQW
DVDTIYLTQDTRELNLQDFSHLEHRDLIPIIAALEYNQWFTKLSSKDLKLSTDVCEQILR
VVSRSNRLEELVLENAGLRTDFAQKLAGALAHNPNSGLHTINLAGNPLEDRGVSSLSIQF
AKLPKGLKHLNLSKTSLSPKGVNSLCQSLSANPLTSSTLTHLDLSGNALRGDDLSHMYNF
LAQPNTIVHLDLSNTECSLDMVCSALLRGCLQCLSVLNLSRSVFSHRKGKEVPLSFKQFF
SSSMALMQINLSGTKLSPEPLKALLLGLACNHSLKGVSLDLSNCELRSGGAQVLEGCIAE
IQNIISLDISDNGLESDLSTLIVWLGKNRSIQHLALGKNFNNMKSKNLTPVLDNLVQMIQ
DEDSPLQSLSLADSKLKAEVTIIINALGSNTSLTKVDISGNGMGDMGAKMLAKALQINTK
LRTVIWDKNNITAQGFQDIAVAMEKNYTLRFMPIPMYDASQALKTNPEKTEEALQKIENY
LLRNHETRKYLQEQAYRLQQGIVTSTTQQMIDRVCVKVQDHLNSLRSCGGDAIQEDLKAA
ERLMRDAKNSKTLLPNLYHVGGASWAGASGLSSSPIQETLESMAGEVTRVVDEQLKGLLE
SMVDAAENLCPNVMKKAHIRQDLIHASTEKISIPRTFVKNVLLEQSGIDILNKISEVKLT
VASFLSDRIVDEILEALSNSHRKLADHFSRRGKSLPQREALEVELAEEKPAKRPTLTVED
LTEVERLEDLDTCMMTPKSKRKSIHSRMLRPVSRAFEMEFDLDKALEEVPIHIEDPPFPS
IRQEKRSSGLISELPSEEGRRLEHFTKLRPKRNKKQQPTQAAICTTSIIPHDGEQNGLMG
RVDEGVDEFFTKKVTKMDGKRSSTRCSDAHDLGEGDEKKKRDSRRSGFLNLIKSRSKSER
PPTVLMPEEFSSPKGAIRSPPVDTAKKDIKTAEHNGAERTEEMKTPEPLEEGQAEEAARV
ERSDSRGSPQSGRRYVQVMGSGLLAEMKAKQERRAACAQKKLVNDVITQDSSNPVLSNTE
RSDASGTVPKLHPGAPEARFGLGTPEKNAKAEPRVEGGYRSRSSSSMPTSPKPLLQSPKP
SPGARPSIPQKPRTASRPEDTPDSPSGPSSPKVALLPPILKKVPSDKERDGQSSSPQPNP
RTFSQEVQGGDYFKRHSDHDSGKPSSRGKRSSKLYFTIAEEEVNAPGYRKSQPTNVSRRS
WGPQAQEYQEQKQRSSGRDGHQGSKSSDSGEEAEKEFIFV
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagagctccgatgtcccccgggagttgatggaaagcgtaaaggatgttatt
ggcagaaagatcaaaatctcagtgaagaagaaagtgaagttggaagtgaagggagacaga
gtggaaaacaaagttctggtgctcacatcatgccgagcctttctcctgtcagcacgcatc
cccaccaagctcgagttaaccttcagctatctggagattcatggagtcatctgccacaag
ccagctcaaatggttgtggaaactgagaagtgtagcatgtccatgaagatggcatcacct
gaggatgtgagcgatgtgctggctcacataggcagctgcttgcggaagatatttccaggc
ctgtccccattgagaatcatgaagaaagtctccatggagccacctgagcgcctggccagt
ctccaggctgtgtgggacagccagaccttggctgagccaggcccctgtggtgggttttca
cagatgtatgcctgtgtgtgcgactggctgggcttttcatacagggaagaagtgcagtgg
gatgtggatacaatttacctgacacaagacaccagggaattgaatttacaagacttcagt
catcttgagcacagagacctgatccccatcattgctgccctggagtataatcagtggttc
accaaactgtcctccaaggaccttaagctgtccacagatgtctgtgaacagatcttgagg
gtggtgagtaggtccaatcgcctggaagaattggtgttggaaaatgctggactcagaaca
gattttgcacaaaaattggcaggtgctctagcacataatcctaactcaggacttcacacc
atcaaccttgctggaaacccgctggaggatcgaggtgtgtcctccttaagtattcaattt
gccaaactcccaaagggattgaagcatttaaacctatctaaaacctcattgtcacctaaa
ggggtgaacagcctttgtcagtccctcagtgccaaccctctgacttcctctaccctcacc
catctggacctctcagggaatgctctccgtggagatgacctctcgcacatgtacaatttt
ttggcccagcccaacaccattgttcacctggatttatctaatacagagtgttctctggac
atggtctgtagtgctcttctccgggggtgccttcagtgtctgtctgtgctcaacctctcc
agatctgtcttctctcacaggaaaggaaaggaagtccccctgtctttcaagcaatttttc
agcagttctatggctttgatgcaaatcaatctttcaggcacgaaattgtctcctgagccc
ttgaaggcactgctcttgggcttggcttgcaatcatagcttgaagggggtctctctggac
ctcagcaactgtgagctgaggtcaggaggtgctcaagtgctagaaggttgcatcgctgaa
atccagaacatcatcagcttagacatctccgacaacggtttagaatctgacctatctacc
ctaatagtatggctcggtaaaaacagatcaatacagcacctggccttaggcaaaaatttt
aataatatgaaatccaaaaatctgacgcctgtgttggacaacttagtgcagatgatccaa
gacgaagactctcctctgcagtccttgtccctggctgactcaaagcttaaggctgaggtc
accatcatcatcaatgcattgggcagcaacacctccctgaccaaagtggacatcagtgga
aatggcatgggggacatgggagcgaagatgctcgccaaggctctgcagatcaacaccaag
ctcaggacagtcatctgggacaaaaacaacatcaccgcacaaggctttcaagatatagcc
gttgctatggaaaagaactacacactgagattcatgccaattcctatgtatgatgcttcc
caagctcttaaaacaaaccctgagaagacagaagaggctctacagaagatagaaaattat
ctgctccggaatcacgaaactagaaaataccttcaggaacaggcctaccgcctgcagcag
ggtatcgtcaccagcaccacccagcagatgattgaccgggtatgtgtgaaggttcaggat
cacctcaactccttgcgatcctgtgggggcgatgctattcaggaggatttaaaggcagca
gagcggctcatgcgtgatgctaagaattctaaaacgttgttaccgaacttataccatgtg
ggtggtgcttcctgggcaggagccagtggcctatcatccagtcccattcaagaaaccctg
gaatcaatggccggagaagtcactagagttgttgatgaacaactgaagggtttgcttgaa
tccatggtggatgcagctgagaatctctgccccaatgtgatgaaaaaagcccacatccga
caggacctgatccatgccagcaccgaaaagatttccatcccacgcacctttgttaaaaat
gtcctgttggaacagtctggaattgacattcttaacaaaattagtgaggtgaagctgaca
gtggcctcgttcttgtctgaccgcatcgtggatgagatcctggaagcgctctccaatagc
catcgaaagttggccgaccatttcagcaggcgaggcaagagccttccccagcgagaagcc
ctagaggtggagctggccgaggaaaagcccgcgaaacgtcccactcttacggtggaggat
ctcaccgaggtggagaggctggaagacctagacacctgtatgatgactcccaagtccaag
aggaagagcatccacagccgaatgctgcggcctgtgtccagggcatttgaaatggagttt
gatcttgataaagccctggaagaagtgccgattcacatcgaagacccacctttcccatca
atccggcaggagaagcgaagctcggggttgatttctgagctgccctcagaggaaggcagg
agactggaacactttaccaagttacggcccaagcgaaacaagaagcagcagccaacacag
gcagcgatctgtaccaccagcatcatcccccatgatggagaacagaatggcctcatgggc
agagtggatgaaggcgtagatgaatttttcaccaagaaagtgactaaaatggatggcaag
cggtcatccacacgctgctcggatgcccacgatctgggtgaaggagatgagaagaaaaaa
cgggattctcggagaagtggctttctcaacctaatcaaatcacggtccaaatctgaacgg
ccacctacggtcctgatgccagaggagttctcttccccaaagggggcaatccggagtcca
ccagtggacaccgccaagaaggacataaaaacagctgagcacaacggagcggaacgcaca
gaggagatgaagacgccagaaccgctggaggagggtcaggcagaggaagctgccagggtc
gagcgcagcgacagcaggggtagcccacagagtggccggcgctatgtgcaggtgatgggc
agtgggctgttggctgagatgaaggccaagcaggaacggagagccgcatgtgcacagaag
aagctcgtcaatgatgtcatcacccaggattcctccaacccagtcttgagcaacacagag
cggtcagatgcgagtggaacagtgcccaaactgcacccaggtgctccagaggcccgcttt
ggtttgggaacaccagaaaagaatgccaaagcagaacccagagtggaagggggctacagg
tctcgaagctcttccagcatgcccaccagtccgaagcccctcctgcagtcccccaagccc
agcccaggagctcggccctccatccctcagaagccaagaactgcctcccgacctgaagat
accccagactctccatctggtcctagttcccctaaagttgctcttcttccacccatcctc
aaaaaagtcccctcggacaaggaacgtgatggccagagcagcagcccccagcccaatccc
aggaccttctcccaggaagtgcaaggaggagattatttcaaaaggcattcagatcatgac
agtggcaagccttccagtagagggaaaagatcttcaaaactctacttcaccattgcagaa
gaggaagtgaatgcacctgggtacaggaagtcacagccaacaaatgtctcaaggagaagc
tggggtccgcaggcccaggagtatcaagaacaaaaacaacggtcctctggcagagatggt
caccaagggagcaaatccagtgactctggagaagaggcagaaaaagagtttatttttgtg
taa
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