Phodopus roborovskii (desert hamster): 127229793 Help Entry 127229793         CDS       T08852                                  Symbol Col24a1 Name (RefSeq) collagen alpha-1(XXIV) chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism prob  Phodopus roborovskii (desert hamster) Pathway prob04820   Cytoskeleton in muscle cells prob04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:prob00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     127229793 (Col24a1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     127229793 (Col24a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:prob00536]     127229793 (Col24a1) Glycosaminoglycan binding proteins [BR:prob00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127229793 (Col24a1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_3 Motif Other DBs NCBI-GeneID:  127229793 NCBI-ProteinID:  XP_051050746 LinkDB All DBs Position Unknown AA seq 1703 aa AA seqDB search MHLGAYRTRHGKVSPTTKTKLLLRVIILCVVCITVHAQGQGIDILHQLGIRGKDVRHTSS ATAVPSSSTPLPRRVHLTEFGVILKNNAYIEAPLVNILPISLRQPLTVLIGLQSHKVNNA FLFSIRNNNRLQLGVQLLPKKLVVHVGGKQSVVFNYSVHDERWHSFAITVRDRVVSMFVE CGKRFFSGETTSEVQTFDSHSVLTLGSMNNNSVHFDGIVCQLDIIPSTVASADYCRYMKQ QCPQANISQAETSLPHAAVMPTRHPEHTPLPRGVAETELPQKIFSEGKAIPNIRNNRSTT VRKSQEHQISRSQLTSFHSENVSAVTLPNYRTEAKEITTEEQTNLNLSASHHHPTETRIH TAGSDITQHGQEAADLPVPKQTSSSIAHTNQEAVTNLKKAVTANLHTNELMEMEQILNTT MYRVTHGPSVDNHLELRKEGEFYPDATFPIENSYEAQPYEYYYYEDYSAMLDMEYIRGPK GDTGPPGPPGPMGIPGPSGKRGPRGIPGPHGNPGLPGLPGPKGPKGDPGLSPGQAASGEK GDHGVLGLVGPPGLQGEKGLKGHPGLPGHRGEQGLPGLAGNIGSPGYPGRQGLAGPEGDP GPKGVRGFIGSPGEAGQLGPEGERGTPGIRGKKGLKGRQGFPGGFGDRGPAGLDGSPGLI GGIGPPGFPGIRGDVGPAGSIGPPGAPGPTGLLGNRGTSGIKGDKGEQGTTGEPGEPGYP GDKGTTGSPGPPGIRGKSGPSGQPGDPGPQGPPGPPGPEGFPGDIGIPGQNGLEGPKGHL GSRGPPGPPGLKGTQGEEGPVGPFGELGTRGKPGRKGYMGEPGPEGLKGEAGDQGDIGKI GETGPVGLPGEGGMPGSIGEKGERGSPGPLGSQGEKGVMGYEGPPGAPGPMGPLGLPGLS GARGAPGSLGPKGQRGPRGPDGLPGDQGAHGAKGEKGNQGKRGPHGLTGKTGSPGERGVQ GKPGLQGLPGSPGDRGPAGEPGARGLPGSAGPPGEMGVEGPPGTEGESGLQGEPGAKGDI GPTGSTGSVGEPGSRGEPGAPGEEGLQGKDGLKGPPGGSGLSGKDGDKGEMGSPGTAGPW GKAGQMGLPGPDGIVGTPGQRGRPGKKGHKGQIGPTGEVGSQGSPGKAGENGPKGARGTR GAVGPLGLMGPDGEPGIPGYTGHQGQPGPSGLPGPKGEKGYPGEDSKVLGPPGPRGEPGP VGEQGERGEHGDEGYKGHMGVPGLRGSTGQQGPPGEPGDQGGQGLKGERGADGPKGKKGV PGPSGKPGIPGLPGLPGPKGLQGYHGVDGMSGDPGKPGLLGKQGLPGVTGSPGRTGLTGS PGPRGGKGSSGPPGSPGVPGPKGEQGLSGQPGIPGKRGQRGAQGDQGLHGEPGLKGQPGE HGDQGLTGFQGFPGPRGPEGDAGIVGITGPKGPTGQRGSTGPLGREGIIGPTGKTGPRGE KGFRGETGPQGPRGQPGPPGPPGAPGPRRQMDINAAIQALIASNSALQMESYQNTEVTLI NHSAEIFKTLTYLSSLLSSMKNPLGTRDNPARICKDLLSCEYKVSDGKYWIDPNLGCSSD AFEVFCNFSAGGQTCLSPVSVTKLEFGVGKVQMNFLHLLSSEATHTVTVHCLSTPRWTST QADGPGLPISFKGWNGQIFEENTLLEPKVLSDDCKIQDGSWHKAKFLFHTQNPDQLPVIE VQNLPHLRTERKHYLESSSVCFL NT seq 5112 nt NT seq  +upstreamnt  +downstreamnt atgcatttaggagcctacaggacaaggcatggaaaggtctcccccaccacaaaaacgaaa ctgcttcttcgtgttattatactatgtgtggtgtgcattactgttcatgcacagggacaa ggcatagatatccttcatcaactaggcattagaggcaaagatgtgagacacacatcatca gcgactgctgtgccatcgtcatccacaccattacctcggagggtccatttgacagaattt ggtgtcattttaaaaaataatgcctatattgaggcacctctagtgaacattttaccaatt agtttaagacagccactgacagtattgattgggttgcaatcacacaaagtgaacaatgca tttctcttcagcattcgaaataacaacaggctgcaattaggagtacagttactgcctaag aaactagtagtgcacgttggaggaaagcaatcagtagttttcaactacagtgtccatgat gagcgatggcactcctttgccatcactgttcgagaccgagttgtctccatgtttgttgaa tgtggaaagagattttttagtggtgagactacttccgaagttcagaccttcgactctcac agtgtgctcaccttgggaagtatgaacaataactctgtccattttgacggaatagtgtgt cagctggatattattccttccacggtagcatctgcagactattgcagatacatgaaacag cagtgcccccaagcaaacatatcccaagctgaaacaagccttcctcatgcagcagtaatg ccgaccagacaccctgagcacactcccctgcccagaggagttgctgaaacagaattgcca cagaagatattctctgagggcaaagccattccaaatatcagaaataaccgctccaccaca gtgcgtaaaagccaggagcaccagatatcaaggtcccagttaacatctttccattcagaa aatgtctcggctgtgactctgccaaactacagaactgaagctaaagaaattaccactgag gaacagacaaatttaaacctgtcagcgtctcatcatcacccaactgagacaagaatacac acagctggatcagacatcacccaacatggccaagaagcagctgacctgcccgtgccgaag cagacatcatctagcattgcacacacaaatcaagaggccgtgactaatctcaagaaggct gtcacagcaaatctacacaccaacgaactcatggaaatggagcagattttaaacaccacc atgtatagagtgacacatgggccctcggtggacaaccaccttgaactaaggaaggaaggt gaattttaccctgatgctactttccccatcgaaaatagctatgaagcccagccttatgag tattattactatgaggattatagtgcaatgcttgacatggagtatattagagggccaaaa ggggacactggacctcccggtccccctggccccatgggtatcccaggtccgtcaggcaag agaggcccgcggggcattccaggaccacatggaaatcctgggttacctgggttgccaggt ccaaagggccccaaaggagatcctgggttgtcgccaggccaagctgcttctggagaaaag ggtgaccatggtgttttgggattagtgggccctcctggtttgcaaggtgaaaagggtctc aaaggacatccagggctcccgggacaccgtggggaacaaggactcccaggactcgctggt aatattgggtcacctggctaccctggcaggcagggtttagctggaccagaaggagatcca ggccctaaaggtgttcgaggtttcattggctctcctggagaggcaggacagcttggacct gaaggagaaaggggtactcctgggatccgtgggaagaagggtctgaaaggaagacagggt tttcctgggggctttggagacagaggccctgctggtctggacggaagtcctgggcttata ggtggcattgggcctcctggatttcctggtattagaggagatgttggtcctgcaggatca attggacccccaggagctcctggaccaacgggtctcttaggaaatagaggaacctctgga atcaaaggtgataagggtgagcaaggcacgacaggagagccaggagaacctgggtaccct ggagacaagggtaccactgggtcgccaggaccaccagggataagaggaaagtcgggacct tcaggacaaccaggtgacccaggaccccagggaccaccaggccctccaggaccagagggt tttccaggagatattgggattcctggacaaaatggactcgaaggaccaaagggacacctt ggaagcagagggcccccagggcctccaggactcaaaggaactcagggtgaagaaggacca gttggaccctttggagaactaggaacaaggggaaaaccaggtcgaaaagggtatatggga gaaccagggccagaaggcttaaagggagaagcaggagaccaaggagatattgggaaaatt ggtgaaacaggacctgttggtttgcctggagaaggagggatgcctggaagcattggtgaa aagggggagcgtggaagtccaggcccacttggttcccagggagagaagggtgtcatgggc tacgaaggtcctcctggagctccaggacccatgggccccctgggattacctggtctttct ggggcaagaggcgcacctggaagcctgggtcctaaaggacaaagaggacccagaggacca gatggcctcccaggggatcaaggtgcccacggcgctaagggtgaaaagggaaatcaagga aaaagagggcctcatggtcttactggtaagactggaagcccaggggagaggggagttcaa ggaaaaccaggcttacaaggactccctggcagcccaggagacagggggcctgctggagaa ccaggagcacgagggctgccgggtagtgctggacctcctggagagatgggtgtggaggga cctccaggcactgagggagaatctggcctacaaggtgaaccaggcgctaagggagacatt ggaccaaccggcagcactggatcggtgggagagccagggtcacggggtgaaccaggagct ccaggagaagaaggcctccaaggaaaagatggattaaaggggcctccaggaggaagcgga ctttctggaaaggatggagacaaaggagagatgggctcaccagggacagcaggaccctgg ggtaaagcaggtcaaatgggtcttccaggaccagatggaattgtgggaaccccaggacaa agaggtcgaccagggaaaaagggtcataaaggacaaataggacccacgggagaagttgga agccaaggctcccccgggaaggctggggaaaatggccctaagggcgccagaggaacaaga ggtgctgtgggtccattaggattgatgggacctgatggagaaccaggaataccaggatac acaggacatcaaggtcaaccaggaccctctggattgccagggcctaaaggagaaaagggt tacccaggagaagacagcaaagtcctaggacctcccgggcctcgaggtgaaccaggccca gtgggggaacaaggagagagaggagagcatggtgatgagggctataagggccatatgggt gtgccaggactccgaggttccactggacaacaagggcccccaggtgaacccggtgaccag ggtggacaaggactgaagggagagagaggagctgatggtccaaaggggaaaaagggagtt cctggtccatctgggaaacctggcattcccggacttccaggccttcccgggccaaaaggc ttacaaggatatcatggagtagacggcatgtcaggagaccctgggaagcctgggctactg ggaaaacaaggacttcctggtgtcacaggcagcccaggaaggacaggactgacgggatcc ccaggtcctcggggaggaaagggctcatcagggcctccagggagccctggtgttccagga ccaaagggtgaacaagggctatctggtcaacctggaattccaggtaaaagaggacagcga ggagcacaaggtgaccaaggactacatggagagcctggtctgaaagggcagcctggagaa cacggtgatcaaggtttgacaggtttccaaggattcccaggccccagaggtccagaaggg gatgctggtattgttggaattacaggccctaaaggtcctactgggcagagaggaagcact ggccctctcggcagagaaggtataataggcccaacaggcaaaactggacccagaggtgaa aaaggcttcagaggtgaaactggtccccaagggccgagaggccaaccaggacctcctggt ccacctggagcgcctggtccaagaagacaaatggatatcaatgctgccattcaagccctg attgcatcaaattctgccctgcagatggagagttaccagaacactgaagtgactttaatc aaccacagtgcagagatattcaaaaccctgacctaccttagcagtttactgagcagcatg aagaaccctcttggcacacgagataaccctgcacggatctgcaaggacttgctcagctgc gagtacaaggtttcagatggaaaatactggattgatccaaatcttgggtgctcttcagat gcctttgaggttttctgcaattttagtgctggtggccagacatgtttatctcctgtttct gtgaccaagctggagtttggagttggcaaagtgcagatgaactttcttcatttgctgagc tcagaagccacccacactgtcaccgttcactgtctaagcaccccaagatggacaagcaca caggcagatggcccgggattgcctattagtttcaaaggatggaatggtcagattttcgaa gaaaatactctacttgaacctaaagtcctctcagatgactgcaagattcaggatggcagc tggcacaaggcaaaattcctttttcacacccagaatcctgatcagcttcctgtgattgaa gtccaaaaccttcctcatctcagaaccgagcgaaagcactaccttgaaagcagttctgtg tgctttctctaa

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