Phodopus roborovskii (desert hamster): 127229816
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Entry
127229816 CDS
T08852
Symbol
Fbh1
Name
(RefSeq) F-box DNA helicase 1
KO
K10300
F-box DNA helicase 1 [EC:
5.6.2.4
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127229816 (Fbh1)
Enzymes [BR:
prob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127229816 (Fbh1)
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127229816 (Fbh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
F-box
UvrD_C_2
F-box-like
AAA_19
Viral_helicase1
AAA_30
zf_Tbcl_Rhp7
F-box_4
ResIII
AAA_12
Motif
Other DBs
NCBI-GeneID:
127229816
NCBI-ProteinID:
XP_051050772
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MKRFKRKHLTAVDCQHLAWTHLASTQPFSQRWTSKDPNHGLYPRPRTKGGNRGRGCQRFI
TEFFLAGRQRCTNDMAKSNSVGQDSCQDSEGDMIFPAESSCTLPQDDNGDVRLGSSGSAL
PARKRSRSFEEENNKAAEASQWDGVTKKTPRHRLFSSCTRLREVRQEAEDGLSQCSTESK
EPGRDIEDIGPDPFPDSYYGLLGTLPCQEVPSHICRLPSEVLRHIFAFLPVEDLYWNLSL
VCHLWREIISDPLFIPWKKLYHRYLINEEHAVSKVDGILLSHGIEKDSDLCVLNLIRYTA
TTKCSPSVDPERVLWSLRDHPLLLEAKACMRQQLPDLYASAGGINVWALVAAMVLLSSCV
NDIQHLLFCLRRPSSTVTMPDVTETLYCIAVLLYAMREKGINISNRIHYNIFYCLYLQEN
SCAQATKIKEEPSVWPGKKTSIQLTHEQQLILNHKMEPLQVVKIMAFAGTGKTSTLVKYA
EKWSQSRFLYVTFNKSIAKQAELVFPSNVICKTFHSMAYSHVGRKYQLKKKLNLFKLTPF
MVNSVLAEGKGGFIRAKLVCKTLENFFASADEELTIDHVPIWCKNSQGQRVMVEQSEKLN
GVHEASRLWDNMRKLGECKEEAYQMTHDGYLKLWQLSKPLLASFDAIFVDEAQDCTPAIM
NIVLSQPCGKIFVGDPHQQIYTFRGAVNALFTVPHTHVFYLTQSFRFGVEIAYVGATILD
VCKRVRKKTLVGGNHQSGIRGDVKGQVALLSRTNANVFDEAVRVTEGESPSRIHLIGGIK
SFGLDRIIDIWTLLQPEEERRKRNLIIKDRFIRRWVHKEGFSGFKRYVTAAEDKELEAKI
AVVEKYNIRIPELVERIERCHIEDLDFAEYILGTVHKAKGLEFDTVHVLDDFVKVPCARH
NLAQLPHFRVESFSEDEWNLLYVAVTRAKKRLIMTKSLENILTLAGEYFLQAELTSNVLK
TGVVHCCVGQCNNTIPVDTILTMKKLPITYSNRKENKGGYLCHSCAEQRIGPLAFLTASP
QQVRAMDRTVEDIVLPRHEALLFLVF
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattcaagcggaagcatcttacagcagttgactgccagcatttggcctggaca
catttggcttcgactcagcccttcagtcagagatggacaagcaaagacccgaaccatggc
ctctatcctagacccagaacaaaaggaggcaataggggtcgaggatgtcagagatttata
actgagttcttcctagctggccgccagcgttgtaccaatgacatggccaaaagcaattct
gttggccaggacagctgtcaggactctgagggtgatatgatttttcctgcagagagcagt
tgcactttgcctcaggatgataatggagacgtgaggctgggctcatcaggatctgctctt
cctgccaggaaacggtctcgttcctttgaggaagagaacaataaagctgcagaggccagc
cagtgggatggagttactaagaagactccacgccatcgtttgttctcatcatgtacaagg
cttagggaagtcaggcaagaagcagaggatggtttgtcacagtgctctacagagtctaaa
gaacctggccgagacattgaagacattggtccagatccctttcctgactcatactatggg
cttcttggaactttgccttgccaagaggtacccagccacatttgtcggctgcctagtgaa
gtcctgaggcacatctttgccttcctcccagtggaggacctctactggaacctcagcttg
gtgtgccacctttggagggaaataattagcgacccactgttcattccttggaaaaagctg
tatcatcgatacttgataaatgaagagcacgctgtcagcaaagtggatggcattctcttg
agccatggaatagaaaaggactcggacttatgtgtgctgaacctcatacgatacacagcc
actaccaaatgctccccaagtgtagaccccgagagagtgctgtggagcctgagggatcac
cctctgcttctggaggctaaggcgtgcatgcgtcaacaattacctgacctctatgcatct
gctgggggcattaacgtctgggccttggtggctgccatggtgctcctctccagctgcgtg
aacgacatccagcatctgctcttctgcctcaggagacccagctccacagtgaccatgcca
gatgtcaccgagaccttatactgcatagctgtgctcctttatgccatgagagagaagggg
attaacatcagcaataggattcactacaacattttctattgcctatatcttcaggagaat
tcctgtgctcaggccaccaaaattaaagaggagccatctgtgtggccaggcaagaaaaca
tctatccaactaacacatgaacaacagctgattctgaaccataagatggagcctctccag
gtggtaaaaattatggcatttgcaggcactgggaaaacttctaccctggtcaagtatgct
gagaagtggtctcagagcaggtttctatatgtcacattcaacaagagcattgcaaagcag
gcagaacttgtcttccccagcaatgtcatctgcaaaaccttccactccatggcctatagt
cacgtcgggcgaaagtaccagctgaagaagaagttgaatctcttcaagttaacgcccttc
atggttaactccgtccttgcagaagggaaaggtggattcataagggccaagttagtgtgt
aagactttagagaacttctttgcatcagctgatgaagagctgactatcgatcatgtgccc
atttggtgcaagaatagccaaggacagagagttatggttgaacagagcgagaagctgaat
ggtgtccacgaagcaagccgactttgggacaacatgcggaagctgggggaatgcaaagaa
gaggcgtaccaaatgacacatgatggctatttgaaactctggcagctgagcaaacctttg
cttgcctcttttgacgccatctttgtggatgaggcccaggattgtaccccagctatcatg
aacatagttctgtctcagccatgtgggaagatctttgtaggggacccccaccaacaaatc
tataccttccgaggggcagtgaatgctctgttcacagtccctcacacccacgtcttttat
ctcacacagagttttagatttggtgtggaaatagcttatgtgggagctaccatcttggat
gtctgcaagagagtcaggaaaaagacattggttggagggaaccatcagagtggcatcaga
ggtgatgtaaagggacaagtggctctgctgtccaggaccaatgccaatgtgtttgatgag
gccgtacgggtaacagaaggagagtcaccttcaaggatacatttgatcggggggatcaaa
tcatttggattggacagaatcattgacatctggacccttcttcagccagaggaagaacgg
aggaaacgaaacctcatcattaaagacaggttcatcagaagatgggtacacaaagaaggc
tttagtggcttcaagaggtacgtgactgctgcagaggacaaggagttggaagcgaaaatt
gcagtagtggaaaaatacaatatcaggattccagaacttgtagaaaggatagagagatgc
cacatagaagatttggactttgcagagtacattctgggcactgtgcacaaagccaaaggc
ttagagtttgacactgtgcatgttttggatgattttgtgaaagtgccttgtgccaggcat
aatcttgcccagcttcctcacttcagagttgagtcattttctgaggatgaatggaatttg
ctgtatgttgctgtcactcgtgccaagaagcggttgataatgaccaaatcactggagaac
atcctaactctggctggggagtatttcttgcaagcagagctgacaagtaacgtcttgaaa
acaggagtggtccactgctgtgtgggacagtgcaacaacaccatccctgtggacaccatc
cttaccatgaagaaactgcctatcacttatagcaacagaaaggaaaacaagggtggctac
ctgtgccactcttgtgcagagcagcggatcgggcctttggcattcctgactgcctcccca
cagcaggtgcgtgccatggatcgcacggtggaagacatagtgctacccaggcatgaggcc
ctgctcttcctggtcttctga
DBGET
integrated database retrieval system
