Phodopus roborovskii (desert hamster): 127230084
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Entry
127230084 CDS
T08852
Symbol
Nalcn
Name
(RefSeq) sodium leak channel NALCN
KO
K21863
sodium leak channel non-selective protein
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
prob04040
]
127230084 (Nalcn)
Ion channels [BR:
prob04040
]
Voltage-gated cation channels
Sodium leak channel, non-selective
127230084 (Nalcn)
BRITE hierarchy
Motif
Pfam:
Ion_trans
PKD_channel
PsaF
DUF5914
FAM165
Motif
Other DBs
NCBI-GeneID:
127230084
NCBI-ProteinID:
XP_051051145
LinkDB
All DBs
Position
Unknown
AA seq
1770 aa
AA seq
DB search
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPMT
FEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKGDTSYVKDRWCVFDGFMVFCLWV
SLVLQAFEIADIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVVNDTKPGNVTWNSLAIPDTHCSPELEEGYQCP
QGFKCMDLEDMGLSRQELGYSGFNEIGTSIFTVYEASSQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGTRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQEMMRSSVFHMFILSMVTVDVIVAASNYYKGENFRRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHVYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTYCLFRILPSTSSSSCDNPKRPTAEDNKYIDQKLRKSVFSIRARNLL
EKETAVTKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGK
SLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIV
GREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMITVTICSC
ISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIF
IYLVSLIFLCWMPQNVPAESGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLV
SILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEK
KPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFV
FLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFR
AKMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKI
IAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVT
LKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAIT
VLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLN
LLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGR
LEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLE
YTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPS
EDTNANSQDQNMQPETSSQQQLLSPTLSDRGGSRQGATDPGKPQRKFGQWRLPSAAIAEK
TAPVNKMRCYSQDPEREEEEVSKGFLAPKPISHSVSSVNLRFGGRTAMKSVVCKMNPMPD
TASCGSEVKKWWTRQLTVESDESGDDLLDI
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaaaggaagcaaagctccagggtggaagcccagccagttactgactttggtcct
gatgaatctctgtcagacaatgctgacatactctggattaataagccatgggtacactct
ttgctccgcatctgtgccatcatcagcgtcatctcagtgtgcatgaacacacccatgacc
ttcgagcactatccccctcttcagtatgtgaccttcaccttggacactttattgatgttt
ctctacacggcagagatgatagcaaaaatgcacatccggggtattgtcaagggtgatacc
tcctatgtgaaggatcgctggtgtgtttttgatggattcatggtcttttgcctttgggtt
tcccttgtgttacaggcatttgaaatagctgacatagttgatcagatgtcaccttggggc
atgctgaggatcccacggccactcattatgatccgggctttcaggatttatttccggttt
gaactgccaaggaccagaattacaaatattttaaagcgatcaggagaacaaatttggagt
gtttccatttttctccttttcttccttcttctgtatggaattttaggagttcaaatgttt
ggaacatttacctaccactgtgttgtgaacgacacaaagccggggaatgtaacctggaat
agcttagctatcccagatacacactgttccccagagctagaagaaggctaccagtgccca
caaggatttaaatgcatggacctggaagacatgggacttagcaggcaagaactgggctac
agtggctttaatgagataggcacgagtatattcacggtgtatgaggcttcgtctcaggaa
ggctgggtgttcctcatgtacagagcgatcgacagcttcccacgctggcgctcctacttc
tacttcatcacgctcattttcttccttgcctggcttgtcaagaatgtgtttattgctgtc
atcattgagacatttgcagaaatcagagtacagtttcaacaaatgtgggggactcggagc
agtacaacttccactgcaaccacacagatgttccatgaagatgctgctggcggttggcag
ctggtagctgtggatgtcaacaagccccagggacgtgccccagcctgcctacaggaaatg
atgcggtcttccgttttccacatgtttatcctgagcatggtgactgtggatgtgatagtg
gcagccagcaactactacaagggagagaacttcagaagacagtatgatgaattctacctt
gcagaggtggcttttacagtcctttttgacctggaagcccttctgaagatatggtgcttg
gggtttactggctacatcagctcatctctccacaaatttgaactactgcttgttattgga
accaccctgcatgtctacccagatctgtatcattctcagttcacatacttccaggttctt
cgggtagtccggcttattaagatttcacctgcactggaagactttgtgtacaagatattt
ggtcctgggaaaaagcttggaagcttggtggtgttcactgccagcctcttgattgttatg
tcagccattagcttgcagatgttctgcttcgttgaagaactggacagattcaccacattt
ccaagggcatttatgtccatgttccagatactgacccaggaaggatgggtggacgtgatg
gatcagactctgaatgctgtaggacatatgtgggcaccagtggttgccatctatttcata
ctctatcatctctttgcaactctgatcctcctgagtttgtttgttgctgttattttggac
aacttagaacttgatgaagatctaaagaagctcaaacaactaaagcaaagcgaagcaaac
gcggacaccaaagaaaaactccctttgcgcttgagaatctttgaaaaattcccaaacagg
ccgcaaatggtgaagatctcaaaacttccttcagattttactgttcctaagatcagggaa
agcttcatgaagcagttcattgaccgccagcaacaggacacctactgtctcttcagaatc
ctcccttccacatcttcttcatcatgtgataaccccaagcggcccacggccgaagacaac
aaatacatcgatcaaaaactccgcaagtccgttttcagcatcagggccaggaaccttctg
gaaaaggagactgcggtcacaaaaatcttaagagcttgcactcgacagcgcatgctgagc
ggatcattcgaggggcagccagcaaaggagaggtcaatccttagtgtgcagcatcacatc
cgccaggaacgcaggtcactaagacatggatccaacagccagaggatcagcaggggcaaa
tctcttgaaactttaactcaagaccattcaaatacagtgcggtacagaaatgcccagaga
gaagacagtgaaataaagatgattcaggagaagaaggagcaagcagagatgaaaaggaaa
gtgcaagaagaggaacttcgagagaaccacccatacttcgacaagccgctcttcattgtg
gggcgggagcacagatttagaaacttctgccgtgtggtggtccgagcacgcttcaatgca
tcaaaaacagaccctgtcacaggagctgtgaaaaacaccaagtaccaccaactttatgac
ttactgggcctggtcacttacctggactgggtcatgatcactgtaacaatctgctcctgc
atttccatgatgtttgaatccccattccggagagtcatgcacgcacccactttacagatt
gctgagtatgtttttgtgatattcatgagcattgagcttaatctgaagattatggcagat
ggtttgtttttcactcccactgcagtaatcagggactttggtggcgtcatggacatattt
atctatcttgtaagtctgatatttctttgttggatgcctcaaaatgtgcctgctgagtca
ggagcccaactcctcatggttcttcggtgcctaagacctctgcggatattcaaactggtg
ccccaaatgaggaaagtcgttcgggaacttttcagtggcttcaaggaaatatttttggtc
tccattctgttgttgacgctgatgcttgtttttgcaagctttggggttcagctctttgct
ggaaagctagccaagtgcaacgaccccaacattatcagaagggaagactgtaatggcatc
ttcagaattaatgtaagtgtgtctaagaacctgaatttgaaattaagacccggggagaaa
aagcctggattttgggtgccccgtgtttgggcgaatcctcgtaactttaactttgacaat
gtgggaaatgccatgctggcactgtttgaagttctgtccttgaaaggctgggtagaagtg
agggatgttattattcatcgtgtggggccgatccatggaatctatattcatgttttcgtg
ttcctgggttgcatgatcggactgaccctttttgtcggtgtagtcattgctaacttcaat
gaaaacaaggggacagctctgttgacggtagatcagagacgatgggaagatctcaagagc
agactgaagatcgcacagcctcttcatctcccaccgcggcctgataatgatggctttaga
gctaagatgtatgacataacccagcatccattttttaagaggacaatcgcattgctggtt
ctggcccagtctgtgctgctctctgttaagtgggacgtcgaggatcccgtgactgttcct
ttggcaacaatgtcagtcgtcttcaccttcatctttgtcttagaggttacaatgaagatc
atagcaatgtctccagctgggttctggcaaagcagaagaaacagatatgatctcttggtg
acgtctcttggtgtcgtatgggtggtgcttcactttgctctgctgaatgcatacacctac
atgatgggagcctgtgtgattgtctttagatttttctccatctgtggaaagcatgtgaca
ttaaagatgctccttctgaccgtggttgtcagcatgtacaagagcttctttatcatcgta
gggatgttcctcttgctgctgtgctatgcctttgctggggttgttctgtttggtaccgtg
aaatatggagagaacattaacaggcatgccaatttttcttcggctggcaaagctattact
gtattgttccgaatcgtcacaggggaagactggaacaagattatgcatgattgtatggtt
cagcctccattttgcactccagatgaatttacatactgggcaacagactgtggcaattac
gcaggggcacttatgtacttctgttcattctatgtcatcatcgcctacatcatgctgaat
ctgcttgtagccataattgtggagaatttctccttgttttattccactgaagaggaccag
cttttaagttacaatgaccttcgacattttcaaatcatatggaacatggtagatgataaa
agagagggtgtgatccccaccttccgagtgaagttcctgttacggctgctgcgtgggagg
ctggaagtggaccttgacaaggataagctcctgtttaagcacatgtgttatgagatggag
agactacacaacggtggcgatgtcaccttccatgatgtcttgagcatgctttcctaccgt
tctgtggacatcaggaagagcctacagctggaggagctgctagcaagggagcagctggag
tatacaatagaggaggaggtggctaagcagaccattcgcatgtggctgaagaagtgcctg
aaacgcatcagggctaaacagcagcagtcatgcagcatcatccacagcctgagggagagc
cagcagcaggagctgagccggttcctgaaccctcccagcatcgagaccacccaaccaagc
gaggacactaatgccaacagccaggaccaaaatatgcagcctgagacaagcagtcagcag
caactcttgagccctactctgtccgacaggggagggagtcggcagggtgcaacagaccct
ggaaaaccccaaaggaagtttggacaatggcgtctgccctcagctgccatcgctgagaag
acggcacctgttaacaaaatgagatgttacagccaagatccagaaagagaggaggaagag
gtttccaagggcttcctggcccccaaaccaataagccattcggtgtcttcagttaaccta
cggtttggaggaaggacagccatgaagtctgtggtgtgcaagatgaaccccatgccagat
acagcttcctgtggctctgaagttaaaaaatggtggaccaggcagctgaccgtggagagt
gatgagagtggagatgacctcctggatatttag
DBGET
integrated database retrieval system