KEGG   Phodopus roborovskii (desert hamster): 127230084
Entry
127230084         CDS       T08852                                 
Symbol
Nalcn
Name
(RefSeq) sodium leak channel NALCN
  KO
K21863  sodium leak channel non-selective protein
Organism
prob  Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:prob00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:prob04040]
    127230084 (Nalcn)
Ion channels [BR:prob04040]
 Voltage-gated cation channels
  Sodium leak channel, non-selective
   127230084 (Nalcn)
Motif
Pfam: Ion_trans PKD_channel PsaF DUF5914 FAM165
Other DBs
NCBI-GeneID: 127230084
NCBI-ProteinID: XP_051051145
LinkDB
Position
Unknown
AA seq 1770 aa
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVISVCMNTPMT
FEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKGDTSYVKDRWCVFDGFMVFCLWV
SLVLQAFEIADIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWS
VSIFLLFFLLLYGILGVQMFGTFTYHCVVNDTKPGNVTWNSLAIPDTHCSPELEEGYQCP
QGFKCMDLEDMGLSRQELGYSGFNEIGTSIFTVYEASSQEGWVFLMYRAIDSFPRWRSYF
YFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGTRSSTTSTATTQMFHEDAAGGWQ
LVAVDVNKPQGRAPACLQEMMRSSVFHMFILSMVTVDVIVAASNYYKGENFRRQYDEFYL
AEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHVYPDLYHSQFTYFQVL
RVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTF
PRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPVVAIYFILYHLFATLILLSLFVAVILD
NLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRE
SFMKQFIDRQQQDTYCLFRILPSTSSSSCDNPKRPTAEDNKYIDQKLRKSVFSIRARNLL
EKETAVTKILRACTRQRMLSGSFEGQPAKERSILSVQHHIRQERRSLRHGSNSQRISRGK
SLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIV
GREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMITVTICSC
ISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIF
IYLVSLIFLCWMPQNVPAESGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLV
SILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEK
KPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFV
FLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFR
AKMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKI
IAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVT
LKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAIT
VLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLN
LLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGR
LEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLE
YTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPS
EDTNANSQDQNMQPETSSQQQLLSPTLSDRGGSRQGATDPGKPQRKFGQWRLPSAAIAEK
TAPVNKMRCYSQDPEREEEEVSKGFLAPKPISHSVSSVNLRFGGRTAMKSVVCKMNPMPD
TASCGSEVKKWWTRQLTVESDESGDDLLDI
NT seq 5313 nt   +upstreamnt  +downstreamnt
atgctcaaaaggaagcaaagctccagggtggaagcccagccagttactgactttggtcct
gatgaatctctgtcagacaatgctgacatactctggattaataagccatgggtacactct
ttgctccgcatctgtgccatcatcagcgtcatctcagtgtgcatgaacacacccatgacc
ttcgagcactatccccctcttcagtatgtgaccttcaccttggacactttattgatgttt
ctctacacggcagagatgatagcaaaaatgcacatccggggtattgtcaagggtgatacc
tcctatgtgaaggatcgctggtgtgtttttgatggattcatggtcttttgcctttgggtt
tcccttgtgttacaggcatttgaaatagctgacatagttgatcagatgtcaccttggggc
atgctgaggatcccacggccactcattatgatccgggctttcaggatttatttccggttt
gaactgccaaggaccagaattacaaatattttaaagcgatcaggagaacaaatttggagt
gtttccatttttctccttttcttccttcttctgtatggaattttaggagttcaaatgttt
ggaacatttacctaccactgtgttgtgaacgacacaaagccggggaatgtaacctggaat
agcttagctatcccagatacacactgttccccagagctagaagaaggctaccagtgccca
caaggatttaaatgcatggacctggaagacatgggacttagcaggcaagaactgggctac
agtggctttaatgagataggcacgagtatattcacggtgtatgaggcttcgtctcaggaa
ggctgggtgttcctcatgtacagagcgatcgacagcttcccacgctggcgctcctacttc
tacttcatcacgctcattttcttccttgcctggcttgtcaagaatgtgtttattgctgtc
atcattgagacatttgcagaaatcagagtacagtttcaacaaatgtgggggactcggagc
agtacaacttccactgcaaccacacagatgttccatgaagatgctgctggcggttggcag
ctggtagctgtggatgtcaacaagccccagggacgtgccccagcctgcctacaggaaatg
atgcggtcttccgttttccacatgtttatcctgagcatggtgactgtggatgtgatagtg
gcagccagcaactactacaagggagagaacttcagaagacagtatgatgaattctacctt
gcagaggtggcttttacagtcctttttgacctggaagcccttctgaagatatggtgcttg
gggtttactggctacatcagctcatctctccacaaatttgaactactgcttgttattgga
accaccctgcatgtctacccagatctgtatcattctcagttcacatacttccaggttctt
cgggtagtccggcttattaagatttcacctgcactggaagactttgtgtacaagatattt
ggtcctgggaaaaagcttggaagcttggtggtgttcactgccagcctcttgattgttatg
tcagccattagcttgcagatgttctgcttcgttgaagaactggacagattcaccacattt
ccaagggcatttatgtccatgttccagatactgacccaggaaggatgggtggacgtgatg
gatcagactctgaatgctgtaggacatatgtgggcaccagtggttgccatctatttcata
ctctatcatctctttgcaactctgatcctcctgagtttgtttgttgctgttattttggac
aacttagaacttgatgaagatctaaagaagctcaaacaactaaagcaaagcgaagcaaac
gcggacaccaaagaaaaactccctttgcgcttgagaatctttgaaaaattcccaaacagg
ccgcaaatggtgaagatctcaaaacttccttcagattttactgttcctaagatcagggaa
agcttcatgaagcagttcattgaccgccagcaacaggacacctactgtctcttcagaatc
ctcccttccacatcttcttcatcatgtgataaccccaagcggcccacggccgaagacaac
aaatacatcgatcaaaaactccgcaagtccgttttcagcatcagggccaggaaccttctg
gaaaaggagactgcggtcacaaaaatcttaagagcttgcactcgacagcgcatgctgagc
ggatcattcgaggggcagccagcaaaggagaggtcaatccttagtgtgcagcatcacatc
cgccaggaacgcaggtcactaagacatggatccaacagccagaggatcagcaggggcaaa
tctcttgaaactttaactcaagaccattcaaatacagtgcggtacagaaatgcccagaga
gaagacagtgaaataaagatgattcaggagaagaaggagcaagcagagatgaaaaggaaa
gtgcaagaagaggaacttcgagagaaccacccatacttcgacaagccgctcttcattgtg
gggcgggagcacagatttagaaacttctgccgtgtggtggtccgagcacgcttcaatgca
tcaaaaacagaccctgtcacaggagctgtgaaaaacaccaagtaccaccaactttatgac
ttactgggcctggtcacttacctggactgggtcatgatcactgtaacaatctgctcctgc
atttccatgatgtttgaatccccattccggagagtcatgcacgcacccactttacagatt
gctgagtatgtttttgtgatattcatgagcattgagcttaatctgaagattatggcagat
ggtttgtttttcactcccactgcagtaatcagggactttggtggcgtcatggacatattt
atctatcttgtaagtctgatatttctttgttggatgcctcaaaatgtgcctgctgagtca
ggagcccaactcctcatggttcttcggtgcctaagacctctgcggatattcaaactggtg
ccccaaatgaggaaagtcgttcgggaacttttcagtggcttcaaggaaatatttttggtc
tccattctgttgttgacgctgatgcttgtttttgcaagctttggggttcagctctttgct
ggaaagctagccaagtgcaacgaccccaacattatcagaagggaagactgtaatggcatc
ttcagaattaatgtaagtgtgtctaagaacctgaatttgaaattaagacccggggagaaa
aagcctggattttgggtgccccgtgtttgggcgaatcctcgtaactttaactttgacaat
gtgggaaatgccatgctggcactgtttgaagttctgtccttgaaaggctgggtagaagtg
agggatgttattattcatcgtgtggggccgatccatggaatctatattcatgttttcgtg
ttcctgggttgcatgatcggactgaccctttttgtcggtgtagtcattgctaacttcaat
gaaaacaaggggacagctctgttgacggtagatcagagacgatgggaagatctcaagagc
agactgaagatcgcacagcctcttcatctcccaccgcggcctgataatgatggctttaga
gctaagatgtatgacataacccagcatccattttttaagaggacaatcgcattgctggtt
ctggcccagtctgtgctgctctctgttaagtgggacgtcgaggatcccgtgactgttcct
ttggcaacaatgtcagtcgtcttcaccttcatctttgtcttagaggttacaatgaagatc
atagcaatgtctccagctgggttctggcaaagcagaagaaacagatatgatctcttggtg
acgtctcttggtgtcgtatgggtggtgcttcactttgctctgctgaatgcatacacctac
atgatgggagcctgtgtgattgtctttagatttttctccatctgtggaaagcatgtgaca
ttaaagatgctccttctgaccgtggttgtcagcatgtacaagagcttctttatcatcgta
gggatgttcctcttgctgctgtgctatgcctttgctggggttgttctgtttggtaccgtg
aaatatggagagaacattaacaggcatgccaatttttcttcggctggcaaagctattact
gtattgttccgaatcgtcacaggggaagactggaacaagattatgcatgattgtatggtt
cagcctccattttgcactccagatgaatttacatactgggcaacagactgtggcaattac
gcaggggcacttatgtacttctgttcattctatgtcatcatcgcctacatcatgctgaat
ctgcttgtagccataattgtggagaatttctccttgttttattccactgaagaggaccag
cttttaagttacaatgaccttcgacattttcaaatcatatggaacatggtagatgataaa
agagagggtgtgatccccaccttccgagtgaagttcctgttacggctgctgcgtgggagg
ctggaagtggaccttgacaaggataagctcctgtttaagcacatgtgttatgagatggag
agactacacaacggtggcgatgtcaccttccatgatgtcttgagcatgctttcctaccgt
tctgtggacatcaggaagagcctacagctggaggagctgctagcaagggagcagctggag
tatacaatagaggaggaggtggctaagcagaccattcgcatgtggctgaagaagtgcctg
aaacgcatcagggctaaacagcagcagtcatgcagcatcatccacagcctgagggagagc
cagcagcaggagctgagccggttcctgaaccctcccagcatcgagaccacccaaccaagc
gaggacactaatgccaacagccaggaccaaaatatgcagcctgagacaagcagtcagcag
caactcttgagccctactctgtccgacaggggagggagtcggcagggtgcaacagaccct
ggaaaaccccaaaggaagtttggacaatggcgtctgccctcagctgccatcgctgagaag
acggcacctgttaacaaaatgagatgttacagccaagatccagaaagagaggaggaagag
gtttccaagggcttcctggcccccaaaccaataagccattcggtgtcttcagttaaccta
cggtttggaggaaggacagccatgaagtctgtggtgtgcaagatgaaccccatgccagat
acagcttcctgtggctctgaagttaaaaaatggtggaccaggcagctgaccgtggagagt
gatgagagtggagatgacctcctggatatttag

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