Phodopus roborovskii (desert hamster): 127230143
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Entry
127230143 CDS
T08852
Symbol
Pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
prob04515
]
127230143 (Pcdh17)
Cell adhesion molecules [BR:
prob04515
]
Cadherins
Protocadherins
127230143 (Pcdh17)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
PepSY
NUC153
Motif
Other DBs
NCBI-GeneID:
127230143
NCBI-ProteinID:
XP_051051270
LinkDB
All DBs
Position
Unknown
AA seq
1187 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGSGSGRS
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNTKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDRELQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGGGGGLGGPGSVPFKLEENYDN
FYTVVTDRPLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKAFEFKVLAKDSGAPAHLESNATVRVMVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDVSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQG
TNSSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQAFPTLLSFAILTLHTITTRLQSVDPLPP
EPEECINCTDECRVLGHSDRCWMPQFPAANQAENADYRTNLFVPTVEANVETETYETVNP
TGKKTFCTFGKDKREHTILIANVKPYLKAKRALSPLLQEVPSASSSPTKACIEPCASTKG
SLDGCEAKPGALAEASSSYMPTDSQYLSPSKQPRDPSFMASDQMARVFADVHSRVSRDSN
EMGAVLEQLDHSNRDLGGESVDAEEVVREIDKLLQDCRGNDPVAVRK
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgctttctcctgtgggcccctgccctgacactcaaaaac
ctcaactactcagtgccagaggagcaaggggcaggcacggtaataggcaacataggcaag
gatgcccgactgcaacccgggcttccgccggctgagcgcggtagcggcagcgggcgaagc
aagtccggcagctaccgggtgctggagaactccgcaccgcacctgctggacgtggacgcc
gacagcgggctcctctacaccaagcagcgcatcgaccgtgagtccttgtgccgccacaat
accaagtgccagctgtcactagaggtgtttgccaacgacaaggaaatctgcatgatcaag
gtagagatacaggatatcaatgacaacgctccctctttcccctcggaccagatcgaaatg
gacatctcagagaatgcggcaccgggcacccgctttccccttaccagcgctcacgaccca
gacgctggcgagaatgggctccgtacctatctgctcacccgcgatgatcatgggctcttt
gcactggacgtcaagtcccgcggcgacggtaccaagttccctgagctggtcattcaaaaa
gcattggaccgcgagctgcagaaccaccacactctggtgctgacagccctggatggcggc
gagcctcctcgctccgccaccgtgcagatcaatgtgaaggtgatcgattccaacgacaac
agtccagtcttcgaggctccgtcatacttggtagaactgcccgagaacgcacccctgggc
actgtggtcattgatctgaacgccactgatgctgatgagggtcccaatggggaagttctc
tactccttcagcagctatgtgccagaccgcgtgcgggagctcttctccattgatcccaaa
actggcctgatccgcgttaagggtaacttggactacgaggagaatggcatgttggagatc
gacgtgcaggccagagacctaggacctaatccaattccagcccattgcaaggtcacagtc
aagcttatcgaccgcaacgacaacgcgccgtccattggtttcgtctccgtgcgccagggg
gcgctgagcgaagccgccccgcctggcacagtcatcgccctggttcgggtcactgaccga
gactcaggcaagaatgggcagctgcagtgtcgggtactgggtggaggagggactggcggt
ggaggtggcttagggggacccggttccgttcccttcaagcttgaagagaactacgacaac
ttttacacggtggttactgaccgtccactggaccgcgagacacaggacgagtacaatgtg
acaatcgtggcccgggatgggggctcccctccactcaactccaccaagtcgttcgctgtc
aagatactggatgagaatgacaacccgcctcgtttcaccaaagggctgtatgttctccaa
gtacatgagaacaacattccaggagaatacctcggttcagtgctcgcccaagatcccgac
ctgggccaaaatgggacagtgtcctactccattcttccctcgcacattggcgacgtgtct
atctacacctatgtgtctgtgaaccccactaacggagccatatacgccctgcgctccttt
aactatgaacaaacgaaggcttttgaatttaaggtgctagctaaggactccggggcgcca
gcgcacttagagagcaacgccactgtgagggtgatggtgttagacgtgaatgacaatgct
ccagtgattgtgctccctactctacagaacgacacggctgagctgcaggtcccgagaaat
gctggcctgggctaccttgtaagcaccgtgcgcgccctggacagcgactttggagagagt
ggacgcctcacgtatgagattgtggatggcaacgacgaccacctgtttgagatcgatcca
tccagcggcgagatccgcaccctacatcccttttgggaggatgtgaccccagtggtggag
ctagtagtgaaggtgactgatcatggcaagcccaccctgtccgcggtggccaaactcatc
attcgttcagtgagcggctctctgcctgaaggagtaccgcgagtgaatggtgagcagcac
cactgggacgtgtcgctgcctctcatagtgactctgagcacgatttccatcatcctccta
gcggccatgatcaccatagctgtcaagtgcaaaagagaaaacaaggagattcgcacttac
aactgccgcatcgctgagtacagccacccacagctaggcggggggaagggcaagaagaag
aaaatcaacaaaaacgatatcatgctggtgcagagcgaggtggaggagaggaacgccatg
aacgtcatgaacgtggtgagcagtccctccctggccacctcccccatgtacttcgactac
caaacccgcctgcccctcagctcgccccggtcagaggtgatgtatcttaagccagcctcc
aacaacctgactgtcccgcagggacacgcaggctgccacaccagcttcaccggacaaggg
actaattcgagcgagacccctgccactcggatgtccataattcagacagacaattttccc
gcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaag
gacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgacagt
gaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatg
aaaactacttcaactaaaagtcaaccacttgaacaagcattcccgactttgctttccttt
gctatcctcaccctacacaccatcactactagacttcaatctgttgacccgcttcctcca
gaaccggaagagtgcattaactgcacagatgagtgccgagtgcttggtcattctgatagg
tgttggatgccacagttccctgctgccaatcaagctgaaaacgcagattaccgcacaaat
ctctttgtacccacagttgaagctaatgttgagactgagacttacgaaactgtgaacccc
actgggaaaaagactttttgtacatttggaaaagacaagcgagagcacactattctcatt
gccaatgtgaaaccttatttaaaagccaaacgtgccctgagccctctcctccaagaggtc
ccctcagcatctagcagcccaaccaaggcatgcattgagccttgcgcctcaacaaaaggc
tccctggatggctgtgaagcaaaaccaggggctttagctgaagcaagcagttcctatatg
cccactgacagtcaatatctgtcacccagtaagcaaccaagagacccttccttcatggct
tctgatcagatggcgagagtctttgcggatgttcattccagagtcagccgggattccaat
gagatgggagctgtgctggagcagcttgatcactccaatagagatctgggcggagagtcc
gtggatgcagaagaagttgtgagagagattgataaactcttgcaagactgccggggaaat
gaccctgtagctgtgagaaagtga
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integrated database retrieval system
