Phodopus roborovskii (desert hamster): 127230176
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Entry
127230176 CDS
T08852
Symbol
Zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13 isoform X1
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127230176 (Zc3h13)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
127230176 (Zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-CCCH_PAN3
Motif
Other DBs
NCBI-GeneID:
127230176
NCBI-ProteinID:
XP_051051325
UniProt:
A0AAU9ZR87
LinkDB
All DBs
Position
Unknown
AA seq
1694 aa
AA seq
DB search
MSKIRRKVTVENTKTISESTSRRPSVFERLGPSTGSTAETQCRNWLKTGSCLYGNTCRFA
HGPSPRGKGYSSNYRRSPERPTGDLRERMKNKRQDVDPESQKRNTEESSSPVRKESSRGR
HRDKEDIKIVKERTPESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKL
EQENMDKREEIIIQKEVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKASSAGKKERKAAVV
ASPLLDQQRTSKSNQSKKKGPRTPSPPPPILEDIILGKKYKEKYKVKDRIEEKPRDGKDR
GRDFERQREKRDKPRSSSPGQHHSPLSSRHHSSSSQSGSSIQRHSPSPRRKRTPSPSYQR
TLTPSLRRSASPYPTHCLSSPQRKQSPPRHRSPMREKGRHDHERTSQSHDRRHERREETR
GKRDREKDAREDRESEHDHRDDREPRDSRDRRDTRDRRELRDSRDIRDSRELRDYGRDTK
ESRDPRDSRSARDVHDYRDREARDIRETRDVRDVREVREARDAREARDARDARDSRDARD
ARDARDVRDVRDGHRKEDIYQEEARSYSRNHLREESSRVELRNDSRNESRSEIRNDRMGR
SRGRGPELPEKGSRGTRSSQMDSHSSSGNYHDSWETRSSYPERDRYPERDTRDQVRDSSF
ERRHGERDRRDNRERDQRPSSPLRHQGRSEELERDERREERRVDRLDERRDERVRDRDRD
RERERERERERERDREREKERERELERERAREREREREKERERERERERDQRDRDHDRER
EREREREREKEREREREERERERERERERERERERERAREREKERERQREWEDKDKGRDD
RREKREDIRDDRTLRDGHEDRKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYHSGDDKNE
KHRLLSQVVRPQDSRSLSPSHLTEDRQSRWKEEDRKSERKESSRRYEEQELKDRISSGDR
QREQAESMESSRVRTQDLVSHRQPEDRDRDRDGSDRAHDEKKKAKAPKKPIKKKKEEDGL
ERGSLETSEDTQVFSPKKGQKKKSIEKKRKRSKGDSDVSDEEVAPQSKKKRGPRTPPLAV
KEELIDISTDKDGMLEDPLKKEDTAFSDWSDEDVPERTEGMDPEHSVATATPGSTPPPLS
SLLPPPPPVAAASTSATALASSAAAAATSAIVPSSANTSNASASEDSHRKCHRTRAEKAE
APHVTLEDTPHRKLLDQKRSSSLGSNRSHRSHTSGRLRSPSNDSAHRSGDDQGSRKRVLH
SGSRDREKTKSLELTGERKSRIDQLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSR
SGSFDSRDRLQERDRYEHDRERDRRDPRQREWDREADKEWPRTRDRDRLRERDRERDKRR
DLDRERERLTAEPVDRDRDRDRTFETSQSESVKRSEAKLESEHERDLDGSSRDSVAMDKE
RMDRDLGSVQGFEDVSRAERTESLEAGDDESKLDDAHSLGSGAGEGYEPISDDELDEILA
GDAEKREDPQEEEKMPDPLDVIDVDWSGLMPKHPKEPREPGAALLKFTPGAVLLRVGISK
KLAGSELFAKVKETCQQLLEKPKDADSLFEHELGALNMAALLRKEERASLLSDLGPCCKA
LCFRRDSAIRKQLVKNEKGTVKQAYTNTPMVDNELLRLSLRLFKRKTTCQAPGQEKTADS
KLAPSSIQQELCVS
NT seq
5085 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaattaggaggaaggtcacagtggaaaacaccaagaccatatccgagagtaca
tccagaagacctagtgtatttgagaggcttggacccagcactggcagcacagcagagaca
cagtgccgtaactggctgaagactggcagctgcctctatggaaacacttgtaggtttgca
catggcccttcacctcgtgggaaaggttacagcagcaattacagaaggtcaccagaaaga
cctacaggtgacctcagagaaagaatgaagaataagcgtcaggatgtggaccctgagtcc
cagaagcggaacacagaggagtcctcctcacctgttaggaaagaatcctcaagagggaga
catagagacaaggaagacataaaaattgttaaggagagaactccagagagtgaagaagaa
aatgtagaatgggagactaacagagatgattctgacaatggcgacattaattatgattat
gttcatgagttgtcattggaaatgaagcgccagaaaatacagagagaattaatgaagttg
gaacaagaaaacatggataagagagaagaaattatcattcaaaaggaggtttccccagaa
gtggttagatcaaaattgtctccatcgccttctctgagaaagtccagtaaatcgccaaag
cgaaagtcaagccccaaggcatcttcagctggcaagaaagagcggaaggctgctgtggtg
gcttccccactgctggaccagcagaggacttcaaaaagcaaccaaagtaaaaagaaagga
ccacgtactcctagtccacctcctcctatactagaagatatcattttggggaaaaaatac
aaagaaaagtataaagtgaaagacaggatagaagaaaaaccaagagatggaaaggataga
ggacgggattttgaaagacaaagagaaaaaagagacaagccaaggtcttcctccccagga
cagcaccattctcctctgtcttctagacatcattcatcctcctcacagtcagggtcatcg
attcagagacactctccttctcctcgtcggaaaaggactccttccccatcctaccagcgg
acgttaactccttctttaagacgttctgcctctccttatccaacacattgtctgtcatct
cctcagagaaagcagagtcctccaagacatcgctctccgatgcgagagaaagggaggcat
gatcatgaacgtacttcacagtcacatgaccggcgtcatgaaaggagggaagaaactcga
ggcaaaagggatagagaaaaggatgccagagaagaccgagaatctgaacacgaccacaga
gatgacagagaacctcgagacagccgagaccggagagatactagagatcgcagggaactg
agagactccagagacatccgggactccagagagttgagggactatggcagagataccaag
gagagccgtgatcccagagattcccggtcagctcgggatgtgcatgactacagagaccgt
gaggctcgggatatccgtgaaactcgggatgttcgggatgttcgggaagttcgggaagct
cgggatgctcgggaagctcgggatgctcgtgacgctcgtgactcacgggacgctcgcgat
gcacgcgatgcacgggatgttcgcgacgttcgggatggtcaccggaaggaggatatatac
caggaagaagcccgcagttacagcagaaaccacctgagagaggagagctctcgagttgag
ctaaggaatgattctagaaatgagtctcgaagtgaaattagaaatgaccggatgggcaga
agtagggggagaggtccagaattgcctgaaaagggaagtcgaggcacaagaagttcccaa
atggatagccacagtagcagcggcaactaccacgacagctgggaaactcgcagcagctac
cctgagagagacagataccctgagagagacactcgagatcaagtcagggattcttccttt
gagagaaggcatggagaaagagaccgccgagacaaccgagaacgagatcaaagaccgagc
tcacctcttcgacatcagggaaggagtgaggagcttgagcgcgatgagcgaagagaagag
cggagagtagacagattggatgagagaagagatgaacgggttagagacagagacagggac
cgagagcgagaacgggagcgcgagagagagcgggaacgagatcgagagcgagagaaagaa
agagaacgagaactagaaagagagcgagctagagagcgggagagggagagagaaaaagag
agggagagggagcgagaacgagagagagatcagagggatcgtgaccacgatcgagagcga
gaaagagagagggagcgcgagagggaaaaagaacgggaacgggagagagaagagagagag
agggaaagagaacgggaacgggagagagagcgggagcgggagcgagaaagggcaagagag
agagagaaagaacgggagcggcaaagagaatgggaagacaaagacaagggccgcgatgac
cgcagggagaagcgcgaggacatccgagacgaccggaccctcagagacggccacgaggac
aggaagtccaagaaacgctatagaaatgaagggagtcccagcccccggcagtcccctaag
cgccggcgggagcattctccggacagtgacgcctaccacagtggggatgacaaaaatgaa
aaacatagactcttgagccaggttgtacgaccacaagactctcgttctctcagcccatct
cacctcacagaagacaggcagagtagatggaaagaggaggatcgtaaatcagaaagaaaa
gagagttcaaggcgctatgaagagcaagaactcaaagacaggatttcttctggcgatagg
caaagagagcaagctgaaagcatggagagctcaagagtgcgtacacaagacctggttagc
caccgccagcctgaggaccgagaccgagaccgagacggctctgatcgagcccatgatgaa
aagaaaaaagcaaaagctccaaagaagcctattaagaaaaaaaaggaggaggatgggcta
gaaaggggtagccttgagacatccgaagatactcaagtgttttcaccaaaaaaagggcag
aagaagaaaagcattgagaaaaagcgtaaaagatccaaaggtgactctgatgtctctgat
gaagaggtggccccgcagagcaagaagaagagaggtccacgcacgccccctctggccgtc
aaggaggaactgattgacatctccaccgataaggatggcatgctcgaggatccattgaag
aaggaagatacagcctttagtgactggtcggatgaggacgtgcctgagcgcacagagggc
atggaccctgaacactccgtagccactgccactcctggcagcacccctccccctctgtcc
tctcttctccctcccccgcctcctgtggctgctgccagtacttcagccactgctcttgcc
tcctcagctgctgccgccgccacctctgccattgttcccagctctgccaacacctccaat
gccagtgcctctgaggactcacatagaaaatgccacaggacacgagcggagaaagcagaa
gcccctcatgtgaccctagaagacacaccacatcgaaagctgctggatcaaaagaggagc
agcagccttggaagcaatcgaagtcaccgtagccacacctctggccgcctgcgctcccca
tctaatgattctgcccatcgaagtggggatgaccagggtagtcgaaagcgagtgctgcat
agtggctccagagacagagagaaaacaaaaagcctggaactcacgggggagagaaaatct
aggattgatcagttaaagcgtggagaaccgagtcgaagtacttcttcagatcgccaggat
tccagaagccacagctcaagaagaagctcccctgagtcggatcggcaggtccattcaagg
tctgggtcatttgacagtcgagacagacttcaggagagagataggtatgagcatgaccga
gagagggaccggagagacccgaggcagagggaatgggaccgggaagctgataaagagtgg
ccgcgaacccgggaccgagatcgactgcgggaacgggacagagagcgagacaaaaggaga
gacttggacagagagagagagagactgactgccgaacctgtggacagggacagagaccga
gacagaacttttgagacttcccagtcagaatctgtgaaacgcagtgaagccaaactggag
agtgagcacgaaagagacctggatggcagttcccgggactcggtagccatggacaaagaa
agaatggatagagacctgggttctgtgcagggctttgaagatgtgagtagagctgagaga
acagagagtctggaagcaggagatgatgagtccaagttagatgacgcacattcattgggg
tctggtgctggggaagggtacgagcccatcagtgacgatgaactagacgaaattctggcc
ggggatgcagaaaagagagaagaccctcaggaagaggagaagatgccagacccactagat
gtgatagatgtggactggtctggacttatgccaaagcatccaaaagaaccaagagagcct
ggggcagcgctcttaaagtttactcccggagctgttcttctgcgggttgggatttctaaa
aagttggcaggttctgagctatttgcgaaagtgaaagaaacatgtcaacaacttctagaa
aagcccaaagatgcagacagccttttcgaacatgaactaggggctctcaacatggctgct
ttacttcgaaaagaagagcgagcgagtcttcttagtgacctgggaccatgttgtaaagca
ttatgtttcagacgggactctgcaatccggaagcagcttgtgaagaatgaaaagggaact
gtgaagcaggcgtacacaaacaccccgatggtagacaatgagcttcttcggctgagcctt
cggttatttaagaggaagaccacttgtcaagcccccggacaagaaaagactgcagacagt
aaattagcaccgtccagcatccagcaggagctgtgtgtgtcctag
DBGET
integrated database retrieval system
