Phodopus roborovskii (desert hamster): 127230267
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Entry
127230267 CDS
T08852
Symbol
Fdft1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00100
Steroid biosynthesis
prob01100
Metabolic pathways
Module
prob_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
127230267 (Fdft1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
prob01006
]
127230267 (Fdft1)
Enzymes [BR:
prob01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
127230267 (Fdft1)
Prenyltransferases [BR:
prob01006
]
Terpene biosynthesis
Squalene/phytoene synthase
127230267 (Fdft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
127230267
NCBI-ProteinID:
XP_051051484
UniProt:
A0AAU9ZQ84
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MEFVKCLGHPEEFYNLLRFRMGGQRNFITKMDQDSLSSSLKTCYKYLNQTSRSFAAVIQA
LDGEIRHAVCVFYLVLRALDTVEDDMSISVEKKIPMLRNFHTFLYDPEWRFTESTQKDRQ
VLEDFPTISLEFRNLAEKYQTVIADICHKMGCGMAEFVDKHVTSKQDWDKYCHYVAGLVG
IGLSRLFSTSEFEDPLVGEDTECANSMGLFLQKTNIIRDYLEDQQEGRAFWPQEVWGRYV
KKLEDFAKPENIDVAVQCLNELITNTLHHIPHVITYLSRLRNQSVFNFCAIPQVMAIATL
AACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIHQYIEEIYHRIPNSDPSSSKTK
EVISTIRTQSLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgtgaagtgcctaggccacccggaggagttctacaacctgctgcgattccgc
atgggaggccagcggaatttcataaccaagatggatcaggactcgctcagcagcagcttg
aagacctgctacaagtatctgaatcagaccagtcgcagcttcgccgccgttatccaggca
ctggatggggaaattcgccacgcagtatgtgtgttttatctggttctccgagctctggac
actgtggaagatgacatgagcatcagtgtggagaagaagatcccaatgctgcgcaacttt
cacaccttcctctatgacccagagtggcggttcacagagagcacgcagaaggaccgacaa
gtgctggaggacttccccacgatctccttggagtttagaaatctggctgagaaatatcaa
acagtgattgctgacatctgtcacaaaatgggatgtgggatggcagaatttgtggacaag
catgtgacctccaaacaggactgggacaagtattgtcactacgttgctggactggtagga
attggcctttctcgtctgttctcgacctcagagtttgaagatcccttagttggtgaagac
acagagtgtgccaactcaatgggtctgttcctgcagaaaacaaatatcattcgtgattat
ctggaagaccaacaagaaggaagagcattttggcctcaagaggtgtggggcagatatgtt
aagaagctggaagactttgctaagccggaaaacatagatgtggctgtgcagtgcttgaat
gaactcataaccaacaccctgcaccatatcccccacgtcatcacctacctgtcaaggctc
cggaaccaaagtgtatttaacttctgtgctattccacaggtaatggccatcgctacgctg
gctgcctgttacaacaatcagcaggttttcaagggggtagtgaagattcggaaggggcaa
gcagttaccctcatgatggatgccaccaacatgccagctgtcaaagctatcatacaccag
tacatagaagagatttatcaccggattcccaactcagacccatcttctagcaaaaccaag
gaggtcatctccaccatcaggacacagagccttcccaactgtcagctcatctcccgaagc
cactactcccccatttacctgtcgtttgtcatgctcttggctgccctgagctggcagtac
ctgagcaccctgtcccaggtcacagaagactatgtgcagacaggagaacactga
DBGET
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