Phodopus roborovskii (desert hamster): 127230312
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Entry
127230312 CDS
T08852
Symbol
Spata13
Name
(RefSeq) spermatogenesis-associated protein 13
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127230312 (Spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127230312 (Spata13)
Membrane trafficking [BR:
prob04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127230312 (Spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
127230312
NCBI-ProteinID:
XP_051051530
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MTTAQDGHGQGATATCSASNPKAPKMVTSSVCQNGNCKSSPSSDPEAVEIRPSPSKLVRL
FSGSRKRMNDHSERPRSVVLVGNSSTWNALASFRKMGSFKRLKSSVLQGIQNREAADISK
EEPSGDPGRTAPNGTITILGKGLRRYPSLGPAGDGTGSDCSDPEDTEDAFQRSTHRSRSI
RRAYGLGRISLMDLGRQPAPEPALCEIHVSNPEPSGAVPQPRRSKSIDSLSVLKSSFKRK
SASNLTELPGDRQVPPRTLSSSSTDSEKPGGSQRRTRRWRSPIRAKDFDRVLRLVSNVKD
AAWKREAPRSAASSPGPGDVNPPLGPRSKLHDDYSRRTSSSVEPDSRRGGPLSTPCVPAL
CTVTPSVAQEPHLDVDTAVFPLETKSAQPLGKDEPRARSPSPSLTDPEGLSQASNEATAG
SQLPFDPVQLPTPLRPTTPKPQSPQSPGSTKCPSSVSVLSLSSADSEERTEDAAHRQLGP
VPLQDTVRTTAGDEGGESSDSHFPMNLNGAASPEERKEEVVNEDDWQQGSAQEEEQTEVP
RISRRSWGSGRHTRPRPLSDYGQLASRSLSIPEDAIATDPPDDNHVDRMHPSRVTTTSQH
PHAPSGCSRGGRRRRPISVIGGVSFYGNTQAEDVENLLVQPAARPPVPAHQVPPYKAVSA
RLRPFTFSQSTPIGLDRVGRRRQMKASNVSSDGGAESSALVDDNGSEEDFSYEELCQANP
RYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKDWWWGR
NEDKEAWFPASFVRLRVNQEELPESCSSSPGEEQDEDTSKARHKHAESQQQMRTNVIQEI
MNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYN
KEEPHSSEIGSCFLQHQEGFAIYSEYCNNHPGACVELSNLMKQSKYRHFFEACRLLQQMI
DIALDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRKL
ESIDKIARWQVSIVGWEGLDILERSSELIHSGELTKITRQGKSQQRIFFLFDHQLVSCKK
DLLRRDMLYYKGRMDMDEVELVDVEDGRDKDWNLSMRNAFKLVSRATDEVHLFCARKQED
KARWLQAYADERQRVQEDQQMGMEIPENQKKLAMLNAQKAGHGKSKGYSSCPVAPPHQSL
PPVHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFHKLTPFRK
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccaggatggccatgggcagggtgccacagccacttgttcagcctccaac
ccgaaggcccccaaaatggtaacatcctcagtatgtcagaatggaaactgcaaaagcagc
cccagcagcgacccggaggctgtggaaatcaggcccagcccttccaagctggtgcgtctt
ttctctgggagtcggaagaggatgaatgaccactcggagaggcctcgctcggtggttctc
gtggggaattcctccacgtggaatgccctggcctccttccgtaaaatgggatcttttaaa
agactaaaatcctctgtccttcaaggaattcagaaccgggaggcggcagatatttccaag
gaagaaccatcaggagaccccggaaggactgctcccaatggcaccatcactatcttggga
aagggcttgcgcaggtacccatccttagggcctgcaggggatgggactgggtctgactgt
tcggatcctgaggacacggaggatgccttccagaggagcacgcaccgttcacgcagcatt
cgcagggcctatggcctaggccgcatcagcctgatggacctggggcggcagccagcaccg
gagcccgccctgtgtgagatccacgtgagcaaccctgagcccagtggcgctgtccctcaa
ccacgcagaagcaagagcattgacagcttgagcgtcctgaagagctccttcaagcgcaag
tctgcatccaacctcacagaactgccaggcgacaggcaggttccccccaggacccttagc
agctcatccactgactcagagaagcccggtggctcccagaggaggaccagacgctggagg
agccccatccgcgccaaggactttgaccgagtcttaagactggtgagcaacgtcaaggat
gcggcctggaagagggaggcccccaggagtgcagcctctagccccggcccaggggatgtg
aatccaccactggggccacgcagcaagctacacgatgactactcgcgccgcaccagcagc
agcgtggagccagattccaggcgtggtggccctttgtccacaccctgtgtcccggcacta
tgtactgttacacccagtgtagctcaagaaccccacctagatgtggacactgcagtattc
cccctggaaaccaaaagtgctcagcccctgggaaaagatgaacctcgtgcccgcagtccc
tcaccaagtctcacagacccagaagggttgagccaagcctccaatgaggcaactgctggc
agccagcttccctttgaccctgtgcagcttcccacccctctgaggcccaccacgcccaag
ccccaaagccctcagagcccagggagtactaaatgtcccagtagtgtaagtgtgctgtcc
ctcagttcagcggacagtgaagaaaggacagaggatgctgcccacaggcagctgggaccc
gtgcccctgcaggatactgtgcgcaccacggccggtgatgagggaggagaaagcagtgac
agccatttccccatgaatctcaatggggcggccagtccggaagagaggaaggaggaggtg
gtgaatgaagatgactggcagcagggctcagcccaggaggaggagcagactgaggtgcct
cgcatctctaggaggagctggggctcaggaaggcacacccggccacggccactgtctgac
tatggtcaactggccagcagaagcttgtccattcctgaagatgccattgctacagaccct
ccagatgacaaccacgtggacaggatgcacccatcaagagtgaccaccaccagccagcat
ccacatgccccctcgggctgttccagggggggccggagaaggcgacctatatctgtgatt
ggaggggtcagcttctatggcaacacccaggcagaggatgtggagaacctcttggtccaa
ccagcagccaggcctccggtgcctgcacaccaggttccaccctacaaggcagtatctgcc
cgcctacggcccttcaccttttcccagagcactcccatcgggctggaccgtgtggggcgc
cgacggcagatgaaagcatccaatgtctcttcagatggaggtgcagagtcttcggcctta
gtggatgacaacggtagtgaggaagacttcagctatgaagagctctgccaggccaaccct
cggtacctgcagccgggcggggagcagctggccatcaatgagctcatcagcgatggcagc
gtggtctgtgcagaagcactgtgggaccatgtgaccatggacgaccaggaactgggcttc
aaggctggggatgtcatccaggtcctggaagcctctaacaaagactggtggtggggccgg
aatgaagacaaagaggcctggttccctgcaagctttgttaggcttcgagtcaatcaggag
gagctgcccgagagctgcagcagctcccctggggaagagcaggacgaggacaccagcaag
gcccgccacaagcacgccgagagccagcagcagatgcgcaccaacgtcatccaggagatc
atgaacaccgagcgagtatacatcaagcacctcaaggacatctgtgagggttatatccga
cagtgtcgtaagcacacgggcatgttcacggttgcgcagctagccactatttttggaaac
attgaagacatttacaaattccaaagaaagtttctgaaagaccttgagaaacagtacaac
aaagaggaacctcactcaagtgaaataggatcctgcttccttcaacaccaagagggcttt
gccatctactcggagtactgcaacaaccacccgggtgcctgtgtggagctgtccaacctc
atgaagcagagcaagtaccggcacttcttcgaggcctgtcgcctgctccagcaaatgatt
gacatcgccttggacggcttcctcctcacgcctgtgcagaagatctgcaaatacccgctg
cagctggctgagctgctcaagtacaccacacaggagcacagcgattacaacaatataaag
gcagcttatgaggccatgaagaatgtggcctgcttgatcaatgaacgcaaacgcaagctg
gagagtatcgacaagattgcccgctggcaggtgtccatcgtaggctgggagggcctggac
attctagagcgaagctccgagttgattcattcgggggaactgaccaaaatcaccaggcag
ggtaagagccagcagcggatcttcttcctgttcgaccaccagctggtgtcctgcaagaag
gacctgctgcgcagggacatgctctactacaagggccgcatggacatggacgaggtggag
cttgtggatgtggaggatgggcgggacaaagactggaacctcagcatgcggaatgccttc
aaactggtcagcagagccacagatgaggtgcacctgttctgcgccagaaagcaagaagac
aaggcgaggtggctgcaggcctacgcagacgagaggcagcgggtacaggaggaccagcag
atgggaatggaaatcccagaaaatcaaaagaaactcgccatgttgaatgctcagaaggct
ggacatgggaaatctaaaggctacagcagctgccccgtggccccaccccaccagagcctg
ccgcctgttcaccagcgccacatcacggtgcctaccagcatcccacagcagcaagtcttt
gccttggctgagcccaagaggaagccgtcactcttctggcacacctttcacaaactcacc
cccttcaggaagtga
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integrated database retrieval system
