Phodopus roborovskii (desert hamster): 127230322
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Entry
127230322 CDS
T08852
Symbol
Setdb2
Name
(RefSeq) LOW QUALITY PROTEIN: histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob00310
Lysine degradation
prob01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127230322 (Setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
prob03036
]
127230322 (Setdb2)
Enzymes [BR:
prob01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
127230322 (Setdb2)
Chromosome and associated proteins [BR:
prob03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127230322 (Setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
127230322 (Setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
Pre-SET
SET
MBD
zf-HC5HC2H_2
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
127230322
NCBI-ProteinID:
XP_051051553
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MGERNGDARSFWMELQDDGKVDFMFEKTQDVLQSLKQKIKDGSATNKDYVQAMILVNEAT
ISNSPAKDHIPVTQNEQENKSNAFPSTSCENSFPEDCTILSTGNKASLPENSKATDLGEE
GSPSSVSFHRHVCSSACLMETPLSLKGENPLQLPIRCHFQRRHAKTNSHSSALHVNYKTP
CGRSLRNMEEVFHYLIETECNFLFTDNFSFNTYVQLTRNYPKQDAVVSDVDISHGVESVP
ISFCNEIDSRKLPQFKYRKTVWPRAYYLNFSSMFSDSCDCSEGCVDIKKCPCLQLTAKNA
KACPLLPDGVCTGYKYKRLQRLIPTGIYECNLLCKCNRQLCQNRVVQHGPQVRLQVFKSE
KKGWGVRCLDDIDRGTFVCIYSGRLLSRATPEKPNADGNGREQQNIVKNTFSKKRKLQVE
CSEKCPPNFSSDINEPVMEMNYRNISRTQRHSVIRSPKFKTAVFYYDEKNMGFVSSESAA
SEDKNGFKPAQEHINSKARAHEDLSSNQFGYSEDKQLIELNMIDITKSREDASPDGRCKH
IATLNNENIKKVLEVPVKKSQEESAASHDQQVFCDEELPSERTKTPPPSLTRLSKENIFL
LDASKEGNVGRFLNHSCSPNLCIQNVFVETHDKNFPLVAFFTNRYVKARTELTWDYGYEA
GTIPEKEILCQWICQNKEKMEKRICAFCPKGQDWSVIYFAPSENIAAHENCLLYSSALVE
CEDHDGLNKARNFDVKSVKKEIWRGRRLKCTLCNEGGATVGCDKESCAKNYHFFCAKKDN
TILQVDGVKGTYKLFCQQHAPELPGTSQSAEGPSLQKKRGRKKRLPLDVPEQPPKKLGRP
KRHMTDEPLGHKGAISHVPFLKKCKEAGLLNELFEGILEKLDSIQGKLLNETASESDYED
IDTLLFDHGLFEDTLIKFQEVIQNKACEQEERQRKLKQQLEALGNLEQTLCSLQENGDLS
HXSSTSRSPPSS
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagaaatggtgatgcaaggagtttctggatggagttacaagatgatggtaaa
gtggattttatgtttgaaaaaacgcaagatgtgctgcagtcgctgaaacagaagataaaa
gatgggtctgccacaaataaagactatgtccaagcaatgattctggtaaatgaagcaacc
ataagtaacagtccagcaaaggatcatataccagtgactcagaatgaacaggaaaacaaa
tcaaatgcatttccctctacatcatgtgaaaactcctttcctgaggactgtaccattctg
tctacaggaaacaaagcatctctccctgagaacagtaaagctacagacctgggagaggag
ggatccccttcaagtgtgtctttccataggcacgtctgctccagtgcttgtctgatggaa
acaccactgtccttgaagggagaaaaccctctacagctacccatcaggtgtcacttccaa
agacgacatgcaaagacaaactctcattcttctgctcttcatgtgaattataaaaccccc
tgtggtcggagtctgcgaaacatggaggaagtttttcattaccttattgagacagagtgt
aactttttattcacagacaacttttctttcaatacttatgtccagttgactcggaattac
ccaaagcaagatgcagttgtttctgatgtggatattagtcatggagtggaatcagtgcca
atttctttctgtaatgaaattgacagtaggaaacttccacagtttaagtacaggaagaca
gtatggccccgagcatactacctaaacttttccagcatgttttctgattcatgtgactgt
tctgagggatgcgtagacataaaaaaatgtccatgtcttcagttgacagcaaaaaatgct
aaagcatgtcccttgttacctgatggagtgtgtactggatataaatacaaaagactgcag
agactcatacctactggcatttatgagtgcaaccttttgtgcaagtgtaaccgtcagttg
tgtcaaaaccgagttgtccaacatggtccccaggtgaggctacaggtgttcaaaagtgag
aagaagggctggggagtacgctgcctggatgacattgaccgagggacatttgtgtgcatt
tattcaggaagattattaagcagagccactcctgagaaaccaaatgccgatggaaatgga
agagaacaacagaacattgtgaaaaatacattttccaaaaagaggaaactacaagttgaa
tgttcagagaaatgtcctcctaactttagcagtgatatcaatgaacctgttatggaaatg
aactacagaaatatttcaagaactcagcgtcattcagtcattagaagccctaaattcaag
acagctgttttttattatgatgagaaaaacatgggatttgtttcctcagagtctgctgcc
tctgaagataagaatggatttaaaccagctcaagaacacataaactctaaagctagagct
cacgaggacttaagttcaaaccaatttggatattctgaagacaaacagctgattgaatta
aacatgatagatataactaaaagtagagaagacgcttcaccagatggcaggtgtaagcac
atagccacattgaataatgagaatattaaaaaggtgcttgaagttccagtaaaaaagtcc
caagaagaatctgcagcctctcacgatcaacaggtcttctgtgatgaagaattgccaagt
gaaaggacaaagacaccaccaccttctctaacaaggctcagtaaagagaatatatttcta
ttggatgcttccaaagaaggaaacgtgggccgtttccttaatcacagttgttccccgaat
ctctgcatacagaatgtttttgtagaaacacatgacaagaattttccattggtcgccttc
tttaccaacaggtatgtgaaagcaagaacagaactaacatgggattatggttatgaagct
gggaccatacctgaaaaggaaatcctctgccaatggatctgtcagaataaagaaaagatg
gaaaaaaggatatgtgccttctgccccaaaggccaagattggagtgtgatatactttgca
ccatcagaaaatatagctgctcatgaaaattgtttgctgtattcatcagcactggtggaa
tgtgaggatcatgatggccttaataaagctaggaattttgatgtgaaatcagtaaagaaa
gagatctggagaggaagaagactgaaatgcacactttgcaatgaaggaggagccaccgtg
ggatgtgataaagaatcctgtgccaagaattaccactttttctgtgccaagaaggacaac
acaattctacaagttgatggagttaaaggaacttataaattattttgccaacaacatgct
ccagaactaccagggaccagtcaaagtgctgagggcccaagcttgcagaaaaagagagga
aggaagaaacgtctccctttagacgtccctgaacagccaccaaagaagttgggtagaccc
aaaagacacatgacagatgagcccctcgggcacaaaggtgcaatttcccatgttcctttt
ctgaagaaatgcaaagaagcaggacttcttaatgaattatttgaagggatactagaaaaa
cttgattcaattcaaggaaaactcctgaatgagactgcttcagaatcagactatgaagac
attgatactttactgtttgaccatggattgtttgaagatacattaataaaattccaagaa
gtaatacagaataaagcttgtgaacaggaagaaaggcagaggaagctgaaacagcagctt
gaggcacttgggaatttagaacaaaccttgtgctcacttcaagaaaatggagacctgagc
cactgaagttctacttcaagatccccaccgtcttcataa
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