Phodopus roborovskii (desert hamster): 127230334
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Entry
127230334 CDS
T08852
Symbol
Ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
prob03037
]
127230334 (Ift88)
Cilium and associated proteins [BR:
prob03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
127230334 (Ift88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_7
TPR_8
TPR_19
TPR_16
TPR_14
TPR_6
TPR_11
ANAPC3
TPR_10
TPR_17
TPR_CcmH_CycH
ARM_TT21_4th
TPR_9
ARM_TT21_5th
ARM_TT21_N
TPR-S
TPR_21
RPN7
TPR_15
DUF6584
ARM_TT21_C
HAT_PRP39_C
HEAT_Nup120
Coatomer_E
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
127230334
NCBI-ProteinID:
XP_051051566
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MMENVHLAPETDEDDLYSGFNDYNPAYDTEELENDTGFQQAVRTSHGRRPPVTAKIPSTA
VSRPIATGYGSKTSLTSSMGRPMTGTIQDGVARPMTAVRAAGFSKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTTPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMS
MAPNLKAGFNLILSCFAIGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLLIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIESSFAVGYNWCVEAVKASQYVELANDLEI
NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVNS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
SFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEMREQRIKSGRDSGGGSRSKREGSAGSDSGQNNSASSKSERLSAKLRALPGTDEPYESS
SNKEIDASYVDPLGPQIERPKTAAKKRVDEDDFADEELGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaatgtgcacctggcaccagaaacagatgaggacgatctttattctggtttt
aatgactacaatccagcctatgatactgaggagttggagaatgacacaggttttcagcaa
gcggtgagaaccagtcatggcagaagacctccagtaactgctaaaataccaagcacagca
gtcagcagacccatagccactggatatgggtctaaaacatccctgacatcatcaatggga
aggccaatgacagggactattcaggatggagttgctcgacccatgacagcagtgagagca
gctggcttttccaaggcagctttgagaggctctgcgtttgacccccttggccagtccagg
ggccctgctcctcctttggaagccaaaaacgaagatagtccagaagagaagattagacag
ttggagaagaaagtaaacgagctggtagaagaaagctgtattgccaacagttgtggagac
ttaaaactggccttagaaaaggcaaaagatgcaggaagaaaagagagagtcctagtgagg
caacgagagcaagttacaactccagagaatatcaacttggatttaacgtactccgttctc
ttcaacttggccagtcagtattcagctaatgaaatgtatgcagaagcactaaacacttac
caagttatagtgaaaaacaagatgtttagcaatgcaggtagactaaaagtgaatatggga
aatatttatttaaaacagaggaattattccaaagccattaagttctaccgtatggcctta
gatcagatcccaagtgtccataaagaaatgagaattaaaataatgcagaatattggaatt
acatttataaaaactggtcaatattcagatgccattaattcatttgagcacatcatgagt
atggcccctaacctgaaggcaggcttcaacctaattctcagttgttttgccattggagat
cgagagaaaatgaagaaggcattccaaaaattaattgctgttccattagaaattgatgaa
gatgataaatatatctccccaagtgatgatccccatactaacttactgattgaagctata
aaaaatgaccacctcaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagctgcaaaacttattgctcctgtaattgaatcatcttttgctgtgggttataac
tggtgtgtggaagcagtgaaagcttctcagtacgtagagctggccaacgatctggagatt
aacaaagcaattacatacctgagacaaaaggactttaaccaagctgtagacaccttgaaa
atgtttgaaaagaaggacagcagagtaaaaagtgcagctgcaaccaatctctcgttcctg
tattatctggaaaacgaatttgcccaagccagcagctatgcagacttagctgtgaactca
gatagatacaacccatcagctctcactaataaagggaacacggtttttgcaaatggtgat
tatgagaaggcagctgaattctataaagaggccctaagaaacgattcttcttgtactgaa
gcactatataacattggcctcacctataagaagctaaaccgcctggacgaagccttggac
tccttcctgaaactgcatgcaatccttcggaacagtgctcaagttctttgccagatagca
aatgtatacgagttaatggaagatcccaatcaagctattgaatggttgatgcagttgatc
agtgttgttccgactgattcccaagctctgtctaaactaggagagttgtacgatagtgag
ggagacaagtcccaggcattccagtattactatgagtcatacaggtatttcccttctaat
attgaggtcattgagtggctgggagcttattacattgatacccaattctgtgaaaaagct
attcagtactttgaaagagcatctcttattcaacccacacaagtgaaatggcagctgatg
gtagctagctgttttagaagaagcggtaattaccaaaaggcattagatacttacaaagag
attcacaggaaatttccagagaatgttgaatgtttgcgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgccacaaaactcaagagattggaaaaaatg
aaagaaatgagggaacagcgcataaaatcgggcagagacagtggcggaggctctcgaagc
aaacgagaggggagcgctggcagtgatagtggccagaacaatagtgccagtagtaaaagt
gaacgactgagtgccaagctcagagctttgcctgggacagatgaaccttatgaaagtagc
agtaacaaagaaatagatgcctcctatgtggatccactgggccctcaaatagaaagacca
aaaactgcagccaaaaagagggtcgatgaggatgactttgctgacgaagagttaggagat
gatttgcttccagaataa
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