KEGG   Phodopus roborovskii (desert hamster): 127230620
Entry
127230620         CDS       T08852                                 
Symbol
Pnn
Name
(RefSeq) pinin isoform X1
  KO
K13114  pinin
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob03013  Nucleocytoplasmic transport
prob03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:prob00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    127230620 (Pnn)
   03015 mRNA surveillance pathway
    127230620 (Pnn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:prob03019]
    127230620 (Pnn)
   03041 Spliceosome [BR:prob03041]
    127230620 (Pnn)
Messenger RNA biogenesis [BR:prob03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     127230620 (Pnn)
Spliceosome [BR:prob03041]
 Complex C
  Other components
   EJC/TREX
    127230620 (Pnn)
SSDB
Motif
Pfam: Pinin_SDK_N Pinin_SDK_memA
Other DBs
NCBI-GeneID: 127230620
NCBI-ProteinID: XP_051051849
UniProt: A0AAU9ZQ42
LinkDB
Position
Unknown
AA seq 727 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQTMKEKEHQVVRN
EEQKAEQEEGKVAQREEEVEETGNQHNDVEIEEAGEEEEKEAGVVHSDAEKEQEEEEQKQ
EMEAKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFDVEPDKESKSLSPGKENVNSLHVEKESEGKEEKEDKEPEPQPEPVAQPQ
PPPQPLPQSQPRPQLHSQTQPVLQSQPPTQPETLQLAALQPPPQVVQEQGNVLPERKGVP
VESIKLPEMPVEPVLTVHSETKNKNKTRSRSRGRAGNKASKSRSRSSSSSSSSSSSTSSS
SGSSSSSGSSSSRSSSSSSSSSSGSSSRDSSSSSSSSSDSRSRSRGRGHNRDRKHRRSMD
RKRRDTSGLERSHKSSKGGSSRDTKGSKDNKSSRSDRKRSISESSRSGKRSSRSERDRKS
DRKDKRR
NT seq 2184 nt   +upstreamnt  +downstreamnt
atggcggtcgcggtgagaactttgcaggagcagctggaaaaggccaaagagagcctcaag
aacgtagacgagaatatccgcaagctcaccgggcgggacccaaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctggaa
ggggcagtcagtaggctgggtggggagcggcggacaagaagagaatcacgccaggaaagc
gacccggaagatgatgatgttaaaaagccagcactgcagtcttctgttgtagctacctcc
aaagagcgtacgcgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcag
agaaaccgacgaatatttggcttgttgatgggcacccttcaaaaattcaaacaagaatct
accgttgcaactgaaaggcaaaagaggcgtcaagaaattgaacaaaagcttgaagttcag
gctgaagaggagagaaagcaggttgaaaatgagaggagagaactgtttgaggaaagacgt
gctaaacagacagaactgcggcttctggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgcaaagataattaagtatataagaaccaagacaaagccccac
ttgttctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaaacaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggagcaagaagagggtaaggtggctcagcgagaggaagaggtggag
gagacaggtaatcagcacaatgatgtagaaatagaagaggcaggagaggaagaggaaaag
gaagcaggtgtagttcatagtgatgcagagaaagaacaggaggaggaggaacagaagcag
gaaatggaggcaaagatggaggaggaaactgaggtaagagaaggtgagaagcaacaggat
agtcagccagaagaggttatggatgtgttagagatggttgaaagtgtcaaaaatgtaatt
gctgagcaggaagtaatggagactaatcaagttgaaagtgtagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggagtttgatgttgagccagataaagaaagtaaa
tctctttctcctggaaaagagaatgttaattctctgcatgtggaaaaggagtctgaggga
aaagaggaaaaagaagataaggagcctgagccccaacctgagcctgtggctcagcctcag
cccccgccccagcccctgccccagagccagccccgccctcagctccactctcagacccag
cctgtactccagtcccagcctcccactcagcctgagactttgcagttagcagctttgcag
cctccacctcaggttgttcaggagcaagggaatgtactacctgagcggaagggtgttcct
gtagagtctataaagctccctgagatgcctgtagagccagtcttgacagttcattcagaa
accaaaaataagaacaaaaccaggagcagaagcaggggccgagcaggaaataaggcgagt
aagagtagaagtcgaagcagtagcagcagcagctccagtagcagctccaccagtagcagc
agtgggagcagctccagcagtggcagcagcagtagtcgcagcagctccagcagcagttcc
agcagcagtggcagcagcagcagagacagcagcagcagcagcagcagtagcagtgatagt
agaagtcgcagtaggggccgaggacataaccgagataggaagcacaggaggagcatggac
cggaagcgaagggacacttcaggactagaaagaagtcacaagtcttccaaaggtggtagt
agtagagatacaaaaggatcaaaggataataagagttcccggtctgacagaaaaaggtct
atatcagaaagtagtcggtcaggcaaaagatcttcaagaagtgaaagagaccgaaaatca
gacaggaaagacaaaaggcgttaa

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