Phodopus roborovskii (desert hamster): 127230620
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Entry
127230620 CDS
T08852
Symbol
Pnn
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob03013
Nucleocytoplasmic transport
prob03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127230620 (Pnn)
03015 mRNA surveillance pathway
127230620 (Pnn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prob03019
]
127230620 (Pnn)
03041 Spliceosome [BR:
prob03041
]
127230620 (Pnn)
Messenger RNA biogenesis [BR:
prob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127230620 (Pnn)
Spliceosome [BR:
prob03041
]
Complex C
Other components
EJC/TREX
127230620 (Pnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
127230620
NCBI-ProteinID:
XP_051051849
UniProt:
A0AAU9ZQ42
LinkDB
All DBs
Position
Unknown
AA seq
727 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQTMKEKEHQVVRN
EEQKAEQEEGKVAQREEEVEETGNQHNDVEIEEAGEEEEKEAGVVHSDAEKEQEEEEQKQ
EMEAKMEEETEVREGEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFDVEPDKESKSLSPGKENVNSLHVEKESEGKEEKEDKEPEPQPEPVAQPQ
PPPQPLPQSQPRPQLHSQTQPVLQSQPPTQPETLQLAALQPPPQVVQEQGNVLPERKGVP
VESIKLPEMPVEPVLTVHSETKNKNKTRSRSRGRAGNKASKSRSRSSSSSSSSSSSTSSS
SGSSSSSGSSSSRSSSSSSSSSSGSSSRDSSSSSSSSSDSRSRSRGRGHNRDRKHRRSMD
RKRRDTSGLERSHKSSKGGSSRDTKGSKDNKSSRSDRKRSISESSRSGKRSSRSERDRKS
DRKDKRR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcggtgagaactttgcaggagcagctggaaaaggccaaagagagcctcaag
aacgtagacgagaatatccgcaagctcaccgggcgggacccaaatgatgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctaaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctggaa
ggggcagtcagtaggctgggtggggagcggcggacaagaagagaatcacgccaggaaagc
gacccggaagatgatgatgttaaaaagccagcactgcagtcttctgttgtagctacctcc
aaagagcgtacgcgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcag
agaaaccgacgaatatttggcttgttgatgggcacccttcaaaaattcaaacaagaatct
accgttgcaactgaaaggcaaaagaggcgtcaagaaattgaacaaaagcttgaagttcag
gctgaagaggagagaaagcaggttgaaaatgagaggagagaactgtttgaggaaagacgt
gctaaacagacagaactgcggcttctggaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgagcataatgcaaagataattaagtatataagaaccaagacaaagccccac
ttgttctatattcctggaagaatgtgtccagctacccaaaagctaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaaacaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggagcaagaagagggtaaggtggctcagcgagaggaagaggtggag
gagacaggtaatcagcacaatgatgtagaaatagaagaggcaggagaggaagaggaaaag
gaagcaggtgtagttcatagtgatgcagagaaagaacaggaggaggaggaacagaagcag
gaaatggaggcaaagatggaggaggaaactgaggtaagagaaggtgagaagcaacaggat
agtcagccagaagaggttatggatgtgttagagatggttgaaagtgtcaaaaatgtaatt
gctgagcaggaagtaatggagactaatcaagttgaaagtgtagaaccttcagaaaatgaa
actagcaaagaattggagccagagatggagtttgatgttgagccagataaagaaagtaaa
tctctttctcctggaaaagagaatgttaattctctgcatgtggaaaaggagtctgaggga
aaagaggaaaaagaagataaggagcctgagccccaacctgagcctgtggctcagcctcag
cccccgccccagcccctgccccagagccagccccgccctcagctccactctcagacccag
cctgtactccagtcccagcctcccactcagcctgagactttgcagttagcagctttgcag
cctccacctcaggttgttcaggagcaagggaatgtactacctgagcggaagggtgttcct
gtagagtctataaagctccctgagatgcctgtagagccagtcttgacagttcattcagaa
accaaaaataagaacaaaaccaggagcagaagcaggggccgagcaggaaataaggcgagt
aagagtagaagtcgaagcagtagcagcagcagctccagtagcagctccaccagtagcagc
agtgggagcagctccagcagtggcagcagcagtagtcgcagcagctccagcagcagttcc
agcagcagtggcagcagcagcagagacagcagcagcagcagcagcagtagcagtgatagt
agaagtcgcagtaggggccgaggacataaccgagataggaagcacaggaggagcatggac
cggaagcgaagggacacttcaggactagaaagaagtcacaagtcttccaaaggtggtagt
agtagagatacaaaaggatcaaaggataataagagttcccggtctgacagaaaaaggtct
atatcagaaagtagtcggtcaggcaaaagatcttcaagaagtgaaagagaccgaaaatca
gacaggaaagacaaaaggcgttaa
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integrated database retrieval system