Phodopus roborovskii (desert hamster): 127230629
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Entry
127230629 CDS
T08852
Symbol
Prpf39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
prob03041
]
127230629 (Prpf39)
Spliceosome [BR:
prob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127230629 (Prpf39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
TPR_12
Motif
Other DBs
NCBI-GeneID:
127230629
NCBI-ProteinID:
XP_051051863
UniProt:
A0AAU9ZUD7
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MQNSHMDEYRNSDNGSTGNSSEVVVEHPDFSTEIMNVTEMEQSPDGSPIVNASTEENEMA
NAVDLPVTETEGNFPPEFEKFWKTVETNPQDFTGWVYLLQYVEQENHLTAARKAFDKFFI
HYPYCYGYWKKYADLEKRHDNIKQSDEVYRRGLQAIPLSVDLWIHYVNFLKETLDPGDPD
TNSTIRGTFEHAVLAAGTDFRSDKLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHH
FQRFKEHIQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLI
TEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFE
IENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTVHLPKKPMA
HMLWAAFEEQQGNINEARTILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEQLLQDAIK
NAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSCDLK
QNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQDT
LKRKAENGSEEPEEKKAHTEDMSSAQIIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYP
PPPT
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaactctgataatggcagcacaggcaacagt
tcagaggtagtagtagagcatccagattttagtactgagattatgaacgttacggagatg
gaacaatcacctgatggctctcccattgtgaacgcatctacagaagaaaatgaaatggca
aatgctgtggacctcccagtgacagaaacagaaggaaacttccctcctgaatttgaaaaa
ttttggaaaacagtagaaactaatcctcaggattttacaggctgggtatatttgcttcag
tacgtagaacaggagaatcacttgacggctgccagaaaagcatttgacaaatttttcata
cactacccatattgctatggttactggaaaaagtatgcagaccttgaaaaacgacatgac
aacattaaacaatcagatgaggtttatcgacggggccttcaggcaatacctcttagtgtt
gatctttggatacattatgtaaacttcttaaaagaaacattggaccctggtgatcctgat
acaaacagcacaataagaggaacttttgagcatgctgttctagctgcaggaacagatttt
cgatctgacaaactatgggaaatgtatataaactgggaaaatgaacagggcaatctgaga
gaagttacagctatatatgatcgtattcttggtattccaacacagctctacagtcatcat
tttcagagatttaaagaacatatacagaataacttgcctagagatcttttaactggtgaa
cagttcattcagctgagaagggaattagcttctgtaaatggacacagtggtgatgatgga
cctcccggggatgaccttccatcaggaattgaagatataactgatccagcaaagctaatt
accgaaatagaaaacatgaggcacagaatcattgaaattcatcaagaaatgtttaactat
aatgaacatgaagttagtaagaggtggacatttgaagaaggtattaaaaggccttatttt
catgtgaaaccattggaaaaggcccaactaaaaaactggaaagaatacttagaattcgaa
attgaaaatgggactcatgaaagagttgtggttctctttgaaagatgtgtcatatcttgt
gccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcattgaa
ggagtgaggcatgtcttcagcagagcttgtactgttcatcttccaaagaaacccatggca
catatgctttgggcagcttttgaggaacagcaggggaacattaatgaagccagaactatc
ttgagaacgtttgaagaatgtgttctaggattggcaatggttcgattaagaagagtaagt
ttagaacgacgtcatggaaatatggaagaagctgaacagttgcttcaagatgctataaag
aatgccaaatcaaataatgaatcatcattttatgctatcaaactagcccgacatcttttc
aaaatacaaaaaaatcttccaaagtcaagaaaggtacttttggaagcaattgaaagagat
aaggagaacacaaagttatacctcaacttacttgaaatggaatacagttgtgacctcaaa
caaaatgaagaaaatattctcaattgctttgacaaagccatacatggttcattgcctatt
aaaatgagaattacattttctcaaagaaaagtggaattccttgaagattttggttcagat
gttaataaacttttgaatgcatatgatgaacatcaaacactcctaaaagaacaggatacc
ttaaaaaggaaagctgaaaatggttcagaagaaccagaagaaaagaaagcccacacagaa
gatatgtcatcagcccagatcattgatggggatttacaggcaaatcaagctgcatataat
tacagtgcctggtatcagtacaattatcagaatccttggaattatggacagtattaccct
ccgcctccaacctga
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