KEGG   Phodopus roborovskii (desert hamster): 127230683
Entry
127230683         CDS       T08852                                 
Name
(RefSeq) homeobox protein SIX1
  KO
K15614  homeobox protein SIX1
Organism
prob  Phodopus roborovskii (desert hamster)
Pathway
prob05202  Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:prob00001]
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    127230683
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:prob03000]
    127230683
Transcription factors [BR:prob03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain SINE
    127230683
SSDB
Motif
Pfam: SIX1_SD Homeodomain Homeobox_KN HTH_3 YdaS_toxin HTH_72 Phage_mat-A Rrn6_K-rich
Other DBs
NCBI-GeneID: 127230683
NCBI-ProteinID: XP_051051941
LinkDB
Position
Unknown
AA seq 284 aa
MSMLPSFGFTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRT
IWDGEETSYCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENTENNNSSSNKQNQLSPLEGGKPLMSSSEEEFSPPQSPDQNSVLLLQSNMGH
ARSSNYSLPGLTASQPSHGLQAHQHQLQDSLLGPLTSSLVDLGS
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtcgatgctgccgtcgtttggttttacgcaagagcaagtggcgtgcgtgtgcgaggtt
ctgcagcaaggagggaacctggaacgcctgggcaggttcttgtggtcgctgcccgcctgc
gatcacctgcataagaacgagagcgtgctgaaggccaaggcggtggtcgccttccaccgc
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcgccccacaaccac
cccaaactgcagcagctgtggctgaaagcgcactacgtggaagccgagaaacttcgcggt
cgaccccttggtgccgtggggaaatatcgggtacgccgaaaattcccgctgccgcgaacc
atctgggacggcgaggagaccagctactgtttcaaggagaagtctcggggcgtgctgcgg
gagtggtacgcgcataacccctacccctcgccgcgggagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggtttaagaaccggaggcaaagagaccgg
gctgccgaggccaaggaaagggagaacactgaaaacaataactcctcctccaacaagcag
aatcaactctctcctctggaagggggcaagccgctcatgtccagctcagaagaggagttc
tcaccgccccaaagtccagaccagaactcggtccttctgctacagagcaatatgggccac
gccaggagctcaaactattctcttccgggcctaacagcctcacagcccagccatggcctg
caggctcatcagcaccagctccaggactctctactgggcccactcacctccagtctggtg
gacttgggttcctaa

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