Phodopus roborovskii (desert hamster): 127230692
Help
Entry
127230692 CDS
T08852
Symbol
Hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04066
HIF-1 signaling pathway
prob04137
Mitophagy - animal
prob04140
Autophagy - animal
prob04148
Efferocytosis
prob04659
Th17 cell differentiation
prob04919
Thyroid hormone signaling pathway
prob05167
Kaposi sarcoma-associated herpesvirus infection
prob05200
Pathways in cancer
prob05205
Proteoglycans in cancer
prob05208
Chemical carcinogenesis - reactive oxygen species
prob05211
Renal cell carcinoma
prob05230
Central carbon metabolism in cancer
prob05231
Choline metabolism in cancer
prob05235
PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
127230692 (Hif1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127230692 (Hif1a)
04137 Mitophagy - animal
127230692 (Hif1a)
04148 Efferocytosis
127230692 (Hif1a)
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
127230692 (Hif1a)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
127230692 (Hif1a)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
127230692 (Hif1a)
05205 Proteoglycans in cancer
127230692 (Hif1a)
05208 Chemical carcinogenesis - reactive oxygen species
127230692 (Hif1a)
05230 Central carbon metabolism in cancer
127230692 (Hif1a)
05231 Choline metabolism in cancer
127230692 (Hif1a)
05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
127230692 (Hif1a)
09162 Cancer: specific types
05211 Renal cell carcinoma
127230692 (Hif1a)
09172 Infectious disease: viral
05167 Kaposi sarcoma-associated herpesvirus infection
127230692 (Hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prob03000
]
127230692 (Hif1a)
Transcription factors [BR:
prob03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127230692 (Hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
127230692
NCBI-ProteinID:
XP_051051953
LinkDB
All DBs
Position
Unknown
AA seq
831 aa
AA seq
DB search
MEGAGGENDKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQPQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESDDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSNDTE
TEDQQLEDVPLYNDVMFPSSNEKITNINLAMSPLPASETPKPLRSSADPALNQEVALKLE
PSPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPPSVNTVTVF
QQSQLQKPTVPATATNATTTTTAATATDELKTVTEDNIEDIKILIASPSSTHVPQETTAA
TASTYSAPHSRTASPDRAVKRVREQAEKAHPRSPNVSVTLSHRNTVSEEELNPKIIALQN
AQRKRKMEHDGSLFQAAGIGTLLQQPGDRAPTTALSWKRVKGCISNEQNGMEQKTIILIP
SDLACRLLGQSMDESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQVN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggagggcgccggcggcgagaacgacaagaaaaataggatgagttctgaacgtcgaaaa
gaaaagtctagagatgcagcgagatctcggagaagcaaggagtcggaagttttttatgag
cttgctcatcagctgccacttccccacaacgtgagctcacatcttgataaagcttctgtt
atgaggctcaccatcagttacctacgtgtgagaaaacttctggatgctggtgatctggac
attgaagatgaaatgaaagcacagatgaactgcttttacttaaaagccctggatggcttt
gttatggtgctaacggatgatggtgacatgatttacatttctgataacgtgaacaaatac
atggggttaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggcccagtgaaaaaaggtaaa
gagcaaaacacacagagaagcttttttctcagaatgaaatgtaccctaactagccggggg
agaacaatgaacataaagtctgcaacctggaaggtgcttcactgcacaggccatattcat
gtatatgataccaacagtaaccaacctcagtgtgggtacaagaaaccacccatgacatgc
ttggtgctgatttgtgaacccattcctcatccatcaaatattgaaattcctttagatagc
aagacttttctcagtcgacacagcctggatatgaaattttcttactgtgatgaaagaatt
actgagttgatgggttatgagccagaagaacttttgggacgctcaatttatgaatattat
catgctttggactctgatcatctgaccaaaactcatcatgacatgtttactaaaggacaa
gtcaccacaggacagtacaggatgcttgccaaaagaggtggatatgtctgggttgaaact
caagcaactgtcatatataatacaaagaactctcagccacaatgcattgtgtgtgtgaac
tacgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagttgaa
tcggacgatacaagctgcctctttgataagcttaagaaagaacctgatgctctaaccctg
ctggccccagctgctggggacacaatcatatctctggactttggcagcaatgacacagaa
actgaagaccaacaacttgaagatgttccattatataatgatgtaatgttcccctcctct
aatgaaaaaataacaaatataaatctggcaatgtctccattacctgcctctgaaactcca
aagccacttcgaagtagtgctgatcctgcactgaatcaagaagtagcattaaaattagag
ccaagtccagagtcactggaactttcttttaccatgccccagattcaagatcagcctgca
agtccttctgatggaagcactagacaaagttcacctgagcctaacagtcccagtgaatat
tgttttgatgtcgatagtgatatggtcaatgtattcaagttggaactggtcgaaaaactg
tttgctgaagacacagaagcaaagaatccattttcaactcaggacactgacttagatctg
gagatgctggccccctacatcccgatggatgatgatttccagttgcgctcctttgatcag
ttgtcaccattagagagcagttcctcaagccctccgagtgtaaacacagtgacagtgttc
cagcagagccagctacagaaacctaccgttcctgccaccgccacaaatgccaccaccacc
accaccgccgccactgccactgatgaattaaaaacagtgacggaggacaatatagaagac
attaaaatactgattgcatctccatcttctactcatgtacctcaagaaaccacagctgct
acagcatcaacctacagtgctcctcacagtcggacggcctcaccagacagagcagtaaag
agagtcagagagcaggcagagaaagcccatccaaggagccctaacgtatctgtcactttg
agtcacagaaatactgtttctgaggaagaattaaacccaaagataatagctttgcagaat
gcccagagaaaacgaaaaatggaacacgatggctccctttttcaagcagcaggaattgga
acattattgcagcagccaggtgaccgtgctcctactacggcactctcttggaaacgtgtg
aaagggtgcatatccaatgaacagaatggaatggagcagaagacaattattttaattcct
tctgatttagcatgtaggctgctgggacagtcgatggatgagagtggattaccacagctg
accagttatgattgtgaagttaatgctcccatacaaggcagcagaaacctactgcagggt
gaagaattactcagagctttggatcaagttaactga
DBGET
integrated database retrieval system
