Phodopus roborovskii (desert hamster): 127230741
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Entry
127230741 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127230741
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127230741
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
U-box type E3
127230741
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-CCHC
zf-C3HC4_3
U-box
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
127230741
NCBI-ProteinID:
XP_051052008
LinkDB
All DBs
Position
Unknown
AA seq
1118 aa
AA seq
DB search
MSCVHYKFSSKLHYDIVTFDGLYISLCDLKKKIMRREKLKATLSDLQISNAQTKEDYPED
NALIPKNSSVIVRRIPAAGVKSTSRTYVKSRSERGMGTTKAIDDSPASTSLAQLTRTANL
AEANAAEEDKIQAMMAQSGHRYDPVNHRKKALGPPPPSYTCFRCGKPGHYIKDCPTNRDK
DFEPGLRIKRSSGIPTSFMMEVKDPSIKGAMLTNTGKYAIPKIDAEAYAIGKKEKPIFLP
EERSSSSSSDDDPIPEELLCLICKDLMTDAALIPCCGNSYCDECIRTALLESDDHTCPTC
QQNEVSPDALTANKFLRQAIENFKNGTGYPIRLRQQVRPPPRPLPPPRPRAQRTPQPLMR
SPISRQQDPSMTPGASSSSRRPTPSIASSFPSNPSCLAPSVPGNPSPAPAPGPEGTAAAS
VSVHWEKSEGPVRDSDTKLSPAAALAWEHSEGACSMASAALVEAKGHRVPALGAPSLLGQ
SLSGGQLIPTTGPVRINTARPGGGPPGWGRSNKLGYLVSPPQPIRRGERNCYRSINRGRR
HSERSQGPQDPSLPATPVFVPVPPPPLYAPPPDALPLPPGVPPAQFSPQFPPAGSPAALA
NISTLWGSSGAQTAHSNALPIAQAPPVTREEFYRAPPRLKGGSTSPSSGSWYSRSPYPCL
KSSSGLTRSGYCSRSFSRSHSRSLSPSPPYPRRGRGKSRNYRSRSRSRRRGDHRSGSRSP
PRRHRRHRARSPQAFGGQSPRKPNGPQGETERQYFNRCREVPPPYGIKACSGPSVESRDP
FEKERYHREPEREYREWYRKYYKGPAADRGGFSPDRLKPPTVRYPPFPXGRRDDCRAGPS
HRTRNLGGSYPEKLSSRESHSRKDNAEAQERENIAGHDKGNKPEKHRKGRKGEESESFLA
HELLEPSGTSRESSRADDTETETLVFLPRREDATPVRDEPMGAESVTCESVSEKDKRENG
KPNGKSEETKRKSAGSAQAKKEKVLRPSKGPQDKEDGERGKAPWSEPPLKNAKEDGAKTG
SAKASPSFQKDDDVNGTPRRAHSKSVKGYLETEPVKKEKVTRDSTKDIQPEKPAGEDEKA
KKPEKSTPLVHKGGKRKRKAEEKNRDGDFGERNKKRKR
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactccactacgacatcgtcacctttgat
gggctctatatctccctctgcgacttaaagaagaagattatgaggagagaaaagctgaaa
gctacccttagcgatctgcagatcagcaacgcgcagacgaaagaagactatcctgaggat
aatgcgctaattcctaaaaattcatctgtaattgtcagaagaattcctgcggcaggtgtg
aagtccacaagcaggacctatgttaaaagtcgaagtgaacgagggatgggaactacaaaa
gcaatcgatgactctcctgcgtctacttctctggcccagcttacaaggacggccaacctg
gctgaagccaatgctgccgaggaagataaaatccaagcaatgatggcgcaatctggccat
cgatacgacccagtcaaccacaggaagaaagctctcggtccaccacctccatcttatacc
tgctttcgttgcggcaagcctggccattatattaaggattgcccaacaaacagggataag
gactttgaacctggccttaggatcaaaaggagcagtggaattcccacaagttttatgatg
gaagtgaaggatcccagcataaaaggcgcgatgcttacgaacactggaaaatacgcaata
ccaaagatagatgcagaggcctatgcaattgggaagaaagagaagccaatcttcttgcca
gaggagcggtcatcgtcatcatcttcagacgatgatcctatcccagaggagcttctgtgc
ctgatctgcaaggaccttatgactgacgctgctctcatcccctgctgtggaaacagttac
tgtgatgagtgtattcggacggcactcctggagtcggatgaccatacatgtccaacgtgt
cagcaaaacgaagtttctcctgacgccttgaccgccaacaagtttttacggcaggctatt
gagaacttcaaaaacgggactggctatccaataagactgcgacaacaggtacggccaccc
ccacgcccattaccaccaccaagaccacgcgcccagcggaccccgcagcctctgatgagg
tctccaatatcaagacagcaggatccttccatgactccaggggcgtcttcctcatctcgt
cgtccaactccctccatagcgtcgtcgttcccttcaaatccatcttgcttggccccctcc
gtgcctggaaatccgtctcctgccccagctccaggacccgaaggaactgcagcagcgtct
gtctcagtccattgggaaaagtcagagggcccagtccgggattctgatactaaattatcg
ccagctgctgccctcgcatgggaacactcggagggagcctgctcaatggcaagtgctgca
ctcgtggaagcaaagggtcaccgagtgcctgcccttggagctccatcgttgctgggacag
tcactatcaggtggacagctgatccccacaactggtccagtaagaataaatactgctcgt
ccaggtggtggtccaccaggttggggacgttccaacaaactcggctacctggtttctccg
ccacagccaattagaagaggggaaagaaactgttacagaagtatcaaccgcgggcgacgc
cacagcgaaagatcccagggcccacaagacccatcactaccagcaactccagtctttgta
ccggtaccaccgcctcctttgtatgcgccgcctcccgatgcgctccctcttcctccgggt
gtacctcccgcacagttttctcctcagtttcctcctgcagggtccccagcagctctcgcc
aacatatcaacgctttggggttcgtcgggggctcagactgctcattcaaacgccctccct
atcgcgcaagcaccacctgtcaccagggaagaattctatagagcgccaccacgactaaag
ggagggtctacatcgccctctagtggttcatggtattcaagaagtccatacccttgcttg
aagtcaagttctggcttgacaaggtcaggctattgctctcgatccttcagccgctcacac
tctcgctccctttcaccatcacccccataccccaggagaggcagaggcaagagtcgcaat
tatcgttcacggtccagatctcgcagacgtggtgatcaccgatcggggtcaaggtcgcct
ccacgtagacatagacgtcatcgtgcaagatctcctcaagcatttgggggtcagtctccc
aggaagccgaatggacctcaaggagaaacagaacgtcagtactttaatagatgcagagaa
gttccacccccttatggcattaaagcctgttccggaccgagtgtcgaaagtagagaccct
tttgagaaagaacgctaccaccgagaaccggagagggaataccgagagtggtaccggaag
tactacaaaggacccgctgctgacagagggggcttctctccagacagacttaaacctcct
actgtcagatatccacccttccctngggggcgcagagacgactgtcgtgctggaccaagt
cacagaactagaaatctaggtggcagctatccagaaaagctgtcatcgagagagagtcac
agtcggaaagataatgcagaagcacaggagagggagaacattgccggccacgataaagga
aacaagcccgagaaacacagaaaaggaagaaagggggaggagagtgagagcttcctggcc
cacgagctgttagagccttccgggacatccagagagtcatcacgagctgatgacactgag
acagaaacactcgttttcctcccaaggagagaggatgctacccctgttagggatgaaccc
atgggtgcagaatctgtcacttgcgaatcagtatctgaaaaagacaagagagaaaacggt
aagccaaacggaaagagtgaggagaccaaacggaaaagcgctggctctgctcaagccaag
aaagaaaaagttttaagaccttctaaaggaccccaagacaaagaagacggggagcgtgga
aaagctccttggtccgaacctccacttaaaaacgccaaggaagatggtgcaaagaccggc
tctgcaaaagcgtcaccatcatttcagaaggatgacgatgtcaacggaacgcccagaaga
gcccactctaaatctgtaaagggatacctcgagacagagccagtcaagaaggagaaggtg
acaagggactctaccaaagacatccagccagaaaagccggctggtgaggatgaaaaggcc
aagaagcctgagaaaagcacaccacttgttcacaagggaggaaaaagaaagaggaaggcg
gaggaaaagaatagagatggagattttggcgagcgaaataaaaagagaaagaggtag
DBGET
integrated database retrieval system
