Phodopus roborovskii (desert hamster): 127230789
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Entry
127230789 CDS
T08852
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
prob
Phodopus roborovskii (desert hamster)
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
prob04121
]
127230789
Enzymes [BR:
prob01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127230789
Ubiquitin system [BR:
prob04121
]
Ubiquitin ligases (E3)
U-box type E3
127230789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-CCHC
zf-C3HC4_3
U-box
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
127230789
NCBI-ProteinID:
XP_051052039
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MSCVHYKFSSKLHYDIVTFDGLHISLCDLKKKIMSREKLKATHSDLQISNAQTKEDYPED
TALIPKNSSVIVRRIPAAGVKSTSRTYVKSRSERGMGTTKAIDGSPASISLAQLTRTANL
AEANAAEEDKIQAMMAQSGHRYDPVNYTKKAVGPPPPSYTCFRCGKPGHYIKDCPTNGDK
DFEPGRRIKRSSGIPTSFMMEVKDPSIKGAMLTNTGKYAIPKIDAEAYAIGKKEKPPFLP
EERSSSSSSDDDPIPEELLCLICKDLMTDAALIPCCGNSYCDECIRTALLESDDHTCPTC
QQNEVSPDALTANKFLRQAIENFKNGTGYPIRLRQQVRPPPTPIPPPRPRAQRTPQPLMR
SPISRQQDPSMTPGASSSSRRPTPSVASSFPSNPSCLAPPVPGNPSPAPAPGPDRTAAAT
VSVHSEKSEGPVGDSDTKLSPAAALAWEHSEGACSMASAALVGGWKGHRVPALGAPSLLG
QSPSGGQLIPTTGPVGINTARPGGGPPGWGRSNKLGYPVSPPQPIRRGERNCYRSINRGR
RHSERSQGPQDPSLPATPVFVPVPPPPLYAPPPDALPLPPGVPPAQFSPQFPPAGSPAAL
ANISTLWVSSGAQTAHSNALPTAQAPPVTREEFYRAPPQLKGGSTSPSSGSSYSRSSYPC
LKSRSGLTRSGSCSRSFSRSHSRSLSPSPPYPRRGRGKSRNFRSRSRSRGRGDHRSRSRS
PPHRHRRYRARSPQAFGGQSPRKPNGHQGETERQYFNRCREVPPPYGNKACSGPSVERRD
PFEKERYHREPEREYREWYRKYYKGYAVGAQPRPAADRGGFSPERLKPPTVRNPPFPXGR
RDDCRAGRSHRTRNLGGSYPEKLSSRENHNRKDNAEAQEWENVAGDDKGNKPEKHRKGRK
GEESESVLAHELLEPSGTDDTKTETLVFLPRREDATPVRDEPMGAESVTCESVSERDKRE
NGKPNRKSDETKRKXDGSAQAKKEKVLRPSKGPQDKEDGEPGKAPWSEPPLKNAKEDGAK
TGSAKASPSFQKDDDVTGTPRRAHSKSVKGHLETEPVKKEKVTRDSTKDIQPEKPAGEDE
KAKKPEKSTLLVHKGEKRKRKAEEKNRDED
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataaattttcctctaaactccactacgacatcgtcacctttgat
gggctccatatctccctctgcgacttaaagaagaagattatgagcagagaaaagctgaaa
gctacccatagcgatctgcagatcagcaacgcacagacgaaagaagactatcctgaggat
actgcgctcattcctaaaaattcatctgtaattgtcagaagaattcctgcggcaggtgtg
aagtccacaagcaggacctatgttaaaagtcgaagtgaacgagggatgggaactacaaaa
gcaatcgatggctctcctgcgtctatttctctggcccagcttacaaggaccgccaatctg
gctgaagccaatgctgccgaggaagataaaatccaagcaatgatggcgcaatctggccat
cgatacgacccagtcaactacacgaagaaagctgtaggtccaccacctccatcttatacc
tgctttcgttgcggcaagcctggccattatattaaggattgcccaacaaacggggataag
gactttgaacctggccgtaggatcaaaaggagcagtggaattcccacaagttttatgatg
gaagtgaaggatcccagcataaaaggcgcgatgcttacgaacactggaaaatacgcaata
ccaaagatagatgcagaggcctatgcaattgggaagaaagagaagccacccttcttgcca
gaggagcggtcatcgtcatcatcttcagacgatgatcctatcccagaggagcttctgtgc
ctcatctgcaaggaccttatgactgacgctgctctcatcccctgctgtggaaacagttac
tgtgatgagtgtatccggacggcactcctggagtcggatgaccatacatgtccaacgtgt
cagcaaaacgaagtttctcctgatgccttgacggccaacaagtttttacggcaggctatt
gagaacttcaaaaacgggactggctatccaataagactgcgacaacaggtacggccaccc
cccacgcccattccaccaccaagaccacgcgcccagcggaccccgcagcctctgatgagg
tctccaatatcaagacagcaggatccttccatgactccaggggcgtcttcctcctctcgt
cgtccaactccctccgtagcgtcgtcgttcccttcaaatccatcttgcttggctcctcct
gtgcctggaaatccgtctcctgccccagctccaggacccgatagaactgcagcagcgact
gtctcggtccattcggaaaagtcagagggccctgtcggggattctgatactaaattatcg
ccagctgccgccctcgcatgggaacactcggagggagcctgctcaatggcaagcgctgca
ctcgtgggagggtggaagggtcaccgagtgcctgcccttggagctccatcattgctggga
cagtcaccatcaggtggacagctgatccccacaaccggtccagtaggaataaatactgct
cgtccaggtggtggtccaccaggttggggacgttccaacaaactcggctacccggtttct
ccgccacagcccattagaagaggggaaagaaattgttacagaagtatcaaccgcgggcga
cgccacagcgaaagatcacagggccctcaagacccgtcactaccggcaactccagtcttt
gtacccgtaccaccgcctcctttgtatgcgccgcctcccgatgcgctccctcttcctccg
ggtgtacctcccgcacagttttctcctcagtttcctcctgcaggatctcccgcagctctc
gccaacatatcaacgctttgggtttcgtcaggggctcagactgctcattcaaacgccctc
cctaccgcgcaagcaccacctgtgaccagggaagaattctatagagcgccaccacaacta
aagggagggtctacatcgccctctagtggttcatcgtattcaagaagttcatacccttgc
ttgaaatcaagatctggcttgacaaggtcaggctcttgctctcgatccttcagccgctca
cactctcgctccctttcaccatcacccccatacccgaggagaggcagaggcaagagccgc
aattttcgttcacggtccagatctcgcggacgtggtgatcaccgatcgaggtcaaggtcg
cctccacatagacatagacgttatcgtgcaagatctcctcaagcctttgggggtcagtct
cccaggaagccgaatggacatcaaggagaaacagaacgtcagtattttaatagatgcaga
gaagttccacccccttatggcaataaagcctgttccggaccgagtgtcgaaaggagagac
ccatttgagaaagaacgctaccaccgagaaccggagagggaataccgagagtggtaccgg
aagtactacaaaggatatgctgtgggggcacagccgaggcccgctgctgacagagggggc
ttctctccagaaaggcttaaacctcctactgtcagaaatccacccttccctngggggcgc
agagacgactgtcgtgctggacgaagtcacagaactagaaatctaggtggcagctatcca
gaaaagctgtcatcgagagagaatcacaatcggaaagataatgcagaagcacaggagtgg
gagaacgttgccggcgacgataaaggaaacaagcccgagaaacacagaaaaggaagaaag
ggggaggagagtgagagcgtcctggcccacgagctgttagagccttccgggactgatgac
actaagacagaaacactcgttttcctcccaaggagagaggatgctacccctgttagggat
gaacccatgggagcagaatctgtcacttgcgaatcagtatctgaaagagacaagagagaa
aacggtaagccaaaccgaaagagtgatgagaccaaacggaaangcgatggctctgctcaa
gccaagaaagaaaaagttttaagaccttctaaaggaccccaagacaaagaagacggggag
cctggaaaagctccttggtccgaacctccacttaaaaacgccaaagaagacggtgcaaag
accggctctgcaaaagcgtcaccatcatttcagaaggatgacgatgtcaccggaactccc
agaagagcccactctaaatctgtaaagggacacctcgagacagagccagtcaagaaggag
aaggtgacaagggactctaccaaagacatccagccagaaaagccggctggtgaggatgaa
aaggccaagaagcctgagaaaagcacactacttgttcacaagggagaaaaaagaaagagg
aaggcggaggaaaagaatagagatgaagat
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integrated database retrieval system
