Phodopus roborovskii (desert hamster): 127230852
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Entry
127230852 CDS
T08852
Symbol
Nrxn3
Name
(RefSeq) neurexin 3 isoform X1
KO
K07377
neurexin
Organism
prob
Phodopus roborovskii (desert hamster)
Pathway
prob04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
prob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127230852 (Nrxn3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
prob04131
]
127230852 (Nrxn3)
Membrane trafficking [BR:
prob04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
127230852 (Nrxn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
SSP160
Motif
Other DBs
NCBI-GeneID:
127230852
NCBI-ProteinID:
XP_051052078
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MSFTLHSVFFTLKVSIFLGSLVGLCLGLEFMGLPNQWARYLRWDASTRSDLSFQFKTNVS
TGLLLYLDDGGVCDFLCLSLVDGRVQLRFSMDCAETTVLSNKQVNDSSWHFLMVSRDRLR
TGLVIDGEGQSGELQPQRPYMDVVSDLFLGGVPADIRPSALTLDGVQNIPGFKGLMLDLK
YGNSEPRLLGSQGVQLEAEGPCGERPCENGGICFLLDGHPTCDCSTTGYGGTLCSEDVSQ
GPGLSHLMMSEQAREENVATFRGSEYLCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQVTISVDG
ILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRLELS
RLARIGDTKMKIYGEVVFKCENVATLDPINFETPEAYISLPKWNTKRMGSISFDFRTTEP
NGLILFTHGKPQERKDVRSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQKKANDG
EWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWT
AMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDSYPCKNNAVCKD
GWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKVIMPMVMHTEAEDVSFRFMSQRAYG
LLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVR
VVRRGKSLKLTVDDDVAEGTMVGDHTRLEFHNIETGIMTEKRYISVVPSSFIGHLQSLMF
NGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTFKTKSSYLTLATLQAYTSMHLFFQFK
TTSADGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRPLNDNQWHNVVIT
RDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLA
SVDLNGRLPDLINDALHKSGQMERGCEVALTKADLQGPSTTCQEDSCANQGVCMQQWEGF
TCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPSTRSDRLAVGFSTTVKDGIL
VRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVNDGKYHVVRFTRNGGNAT
LQVDNWPVNEHYPTGNTDNERLQMVKQKIPFKYNRPVEEWLQEKGRQLTIFNTQAQIAIG
GKDKGRLFQGQLSGLYYDGLKVLNMAAENNPNIKINGSVRLVGEVPSVSGTTQTTSMPPE
MSTTVMETTTTMATTTTRKNRSTASIQPTSDDLVSSAECSSDDEDFVECEPSTGGELVIP
LLVEDPLATPPIATRVPSITLPPTFRPLLTIIETTKDSLSMTSEAGLPCLSDQGSEGCDD
DGLVISGYGSGETFDSNLPPTDDEDFYTTFSLVTDKSLSTSIFEGGYKAHAPKWESKDFR
PNKVSETSRTTTTSLSPELIRFTASSSSGMVPKLPAGKMNNRDLKPQPDIVLLPLPTAYE
LDSTKLKSPLITSPMFRNVPTANPTEPGIRRVPGASEVIRESSSTTGMVVGIVAAAALCI
LILLYAMYKYRNRDEGSYQVDETRNYISNSAQSNGTLMKEKQASSKSGHKKQKNKDKEYY
V
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgagctttaccctccactcagttttcttcaccctaaaggtgagcatctttctgggctcc
ctggttgggctctgcctgggtctggagttcatgggcctccccaaccagtgggctcgctac
ctacgctgggatgctagtacgcgcagtgacctgagcttccagttcaagaccaatgtgtcc
actgggctgctcctgtatttggatgatggtggtgtctgtgacttcctctgcctctctctg
gtggatggccgagttcaactccgctttagcatggactgcgctgagaccaccgtgttgtcc
aacaagcaggtgaacgacagcagctggcactttctcatggtgagccgtgaccgcctgcgc
actgggctggtgattgacggtgagggccagtctggggagctacagcctcaacggccctac
atggatgtggtcagtgacttgttcctcggtggcgtccctgctgatatccgaccttctgcc
ctgaccctcgatggagtacagaacatacccggctttaagggattaatgctggatctcaag
tacggcaactcagagcctcggcttctggggagccagggtgtccagttagaagcggaggga
ccctgtggtgagcgtccctgtgaaaatggtgggatctgcttcctcctggatggccatcct
acctgtgactgttctaccactggctatggtggcacactctgctcagaagatgtcagtcaa
ggtccaggcctttcccacctaatgatgagtgaacaagctcgagaggagaacgtggccacc
ttccgaggctcagagtatctgtgctatgacctgtctcagaaccccatccagagcagcagc
gatgaaatcaccctctcctttaagacctggcaacgcaatgggctcatccttcatacgggc
aagtcggccgactatgttaacctagctctgaaggatggtgccgtctccttggtcattaac
ctgggctctggggcctttgaggctattgtggagccagtgaatgggaaattcaacgacaac
gcctggcatgatgttaaagtgacacgaaatctccggcaggtgacaatctctgtggatggc
atcctcactacgacgggctacacccaagaggactacaccatgctgggctcggatgacttc
ttctatgtcggtggaagcccaagcaccgcagacttgccaggctcacctgtgagcaacaac
ttcatgggctgccttaaagaggttgtttataagaataatgacatccgtctagagctgtct
cgcttggcccggattggggacaccaagatgaaaatttatggtgaagttgtgttcaaatgt
gaaaatgtggccacactggatcccatcaacttcgaaaccccagaggcttacatcagcttg
cccaagtggaacaccaaacgcatgggttccatctcctttgactttcgcaccactgagccc
aatggcctgattctcttcactcatgggaaaccccaagaaagaaaagatgtccggagccaa
aagaacacaaaagttgacttctttgctgtggaacttctcgatggcaacctatatttgcta
cttgatatgggctcaggcaccatcaaagtgaaggccactcagaagaaagccaatgatggg
gaatggtaccatgtggacattcagcgtgatggcagatcaggtaccatatctgtgaacagc
aggcgcacgccatttaccgccagcggtgagagtgaaatcttggacctggagggggacatg
tatctgggcggactgccagagaaccgagctggtctcattctccccacggagctctggact
gccatgctcaactatggttatgtgggctgcatccgtgacctgttcattgatgggcgcagc
aagaacattcggcagctggcggagatgcagaacgcggcaggcgtcaagtcctcctgttca
cgcatgagcgccaagcagtgtgacagctacccctgcaagaacaatgctgtgtgcaaggac
ggctggaaccgcttcatctgtgactgtacgggcaccggctactggggaagaacctgtgag
agagaagcatctatcctgagctatgacggcagtatgtacatgaaggtcatcatgcccatg
gtgatgcacacagaagcagaagatgtgtccttccgcttcatgtcacaaagagcctatggg
ctgctagtagccactacctcgagggactctgcagatacactacgtctagagctggatggt
gggcgtgtcaagctcatggttaacttagactgtatcaggataaactgtaactccagcaaa
ggacctgagaccctgtatgcagggcagaagctcaatgacaatgagtggcacaccgtccgg
gtagtgcggagaggaaaaagccttaagttaacagtggatgacgacgtggctgaaggtaca
atggtgggagaccacacccgcctggagttccacaacattgaaactggtatcatgactgag
aagcgttacatctctgtggtcccttccagtttcattggtcatcttcagagcctcatgttc
aatggcttgctctacattgatttgtgcaaaaatggggacattgactactgtgaactgaag
gctcgttttggattgaggaacatcatcgctgaccctgtcacttttaagaccaagagcagc
tacctgacccttgccaccctccaggcctacacctccatgcacctctttttccagttcaag
accacttccgctgatggcttcattctcttcaatagtggcgatggcaatgattttattgca
gttgagctggtcaaggggtacatacactatgtgtttgatcttggcaatggtcccaatgta
atcaaaggcaacagtgaccgccccctaaatgacaaccagtggcacaatgtcgtcatcact
cgggacaacagtaatacccacagcctgaaagtggataccaaggtagtcactcaggtcatc
aatggtgccaaaaatctggatttgaaaggtgacctctacatggctggcttagctcagggc
atgtacagcaaccttccgaagcttgtggcctcccgggatggatttcagggctgtctggcc
tctgtggacttgaatgggcgactgccggatctcatcaatgatgctctccacaagagcggc
cagatggagcgaggctgtgaagttgcgttgaccaaagctgacctgcaaggacccagtaca
acatgtcaggaggattcctgtgccaaccaaggggtttgcatgcagcagtgggaaggcttc
acctgtgactgctctatgacatcatattcgggaaaccagtgcaatgaccctggtgccaca
tacatctttggaaagagtggaggcctcatcctctacacctggccagcgaatgacagaccc
agcacacgctctgaccgcctggctgtgggcttcagcacgactgtgaaggatggaatctta
gtacgcattgacagtgccccaggacttggcgacttcctccagcttcacatagaacaaggg
aaaattggagttgtcttcaatattggcacagttgacatctccatcaaagaagagagaacc
cctgtcaatgacggaaaataccacgtggtgcgcttcaccaggaatggtggcaatgccaca
cttcaggtggacaactggccagtgaatgaacattatcctacaggcaacactgataatgaa
cgcctccaaatggtaaaacagaaaatccccttcaaatataaccggcctgtagaggagtgg
ctgcaggaaaaaggccggcagttaaccatcttcaacacccaggcgcaaatagccattgga
ggaaaggacaaaggacgcctcttccaaggccaactctctgggctctattatgatggtttg
aaagtactgaacatggcagctgagaacaaccctaatattaaaatcaatggaagtgttcgg
ctagtgggagaagtcccatcagtctcgggaacaacacagacgacctccatgccacctgaa
atgtctaccactgtcatggaaaccaccaccacaatggctactactaccacccggaagaat
cgctcaacagccagcattcagccaacatcagatgaccttgtttcatctgctgaatgttca
agtgatgatgaagactttgtcgaatgtgaaccaagtacaggaggtgaattagttattcct
cttcttgtagaagaccctttagctacccctcctattgctacacgtgtaccctccattaca
ctcccccctaccttccgccccctcctcaccattattgagaccaccaaagattccctgtcc
atgacctctgaggcggggttaccttgcttgtcggaccaaggcagcgaaggttgtgatgat
gatggcttggtgatatctgggtatggctcaggggaaacctttgactctaacctgccccct
actgatgatgaagatttttacaccaccttctccttggtaacagataagagtctttccact
tcaatcttcgaaggtggctacaaagcacatgcgcccaagtgggaatccaaggactttaga
cctaacaaagtctcggaaactagtagaactacaaccacatctttgtcccctgagctgatc
cgcttcacagcgtcctcctcgtctgggatggtgcccaaattgccagctggcaaaatgaat
aaccgtgatctcaaaccccagcctgatatagtgttgcttccgttgcccactgcctatgag
ctagacagcaccaaactgaagagcccactaattacttcccccatgttccgtaatgtgccc
acagcaaaccccacggagccaggaatcagacgggttccgggggcctcagaggtgatccgg
gagtccagcagtacaacagggatggtcgtcggcattgtggctgctgccgccctctgcatc
ttgatcctcctgtatgccatgtacaagtacaggaacagggacgaggggtcctatcaagtg
gatgagacgaggaactacatcagcaactcggcccagagcaacggcacgctcatgaaggag
aagcaagccagctccaagagtggccataagaaacagaaaaacaaggacaaggagtattat
gtgtaa
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